RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 MPTX1A8MV57 137 aa13.68□□□□□ -0.22
SMPD4-210ENST00000441135 IFNA4P05014 189 aa13.68□□□□□ -0.22
SMPD4-210ENST00000441135 IGLC1P0CG04 106 aa13.68□□□□□ -0.22
SMPD4-210ENST00000441135 BMI1P35226 326 aa13.68□□□□□ -0.22
SMPD4-210ENST00000441135 NKX2-1P43699 371 aaPredicted RBP13.68□□□□□ -0.22
SMPD4-210ENST00000441135 RND2P52198 227 aa13.68□□□□□ -0.22
SMPD4-210ENST00000441135 DEFA1P59665 94 aa13.68□□□□□ -0.22
SMPD4-210ENST00000441135 DEFA3P59666 94 aa13.68□□□□□ -0.22
SMPD4-210ENST00000441135 YPEL3P61236 119 aaPredicted RBP13.68□□□□□ -0.22
SMPD4-210ENST00000441135 MLANAQ16655 118 aa13.68□□□□□ -0.22
SMPD4-210ENST00000441135 GUCA2BQ16661 112 aa13.68□□□□□ -0.22
SMPD4-210ENST00000441135 BTNL8Q6UX41 500 aa13.68□□□□□ -0.22
SMPD4-210ENST00000441135 TOMM20LQ6UXN7 152 aa13.68□□□□□ -0.22
SMPD4-210ENST00000441135 SLC16A13Q7RTY0 426 aa13.68□□□□□ -0.22
SMPD4-210ENST00000441135 NEURL2Q9BR09 285 aa13.68□□□□□ -0.22
SMPD4-210ENST00000441135 ZFAND3Q9H8U3 227 aa13.68□□□□□ -0.22
SMPD4-210ENST00000441135 SMPXQ9UHP9 88 aa13.68□□□□□ -0.22
SMPD4-210ENST00000441135 HUWE1Q7Z6Z7 4374 aaKnown RBP13.68□□□□□ -0.22
SMPD4-210ENST00000441135 IGHV7-4-1A0A0J9YVY3 117 aa13.67□□□□□ -0.22
SMPD4-210ENST00000441135 YIF1AO95070 293 aa13.67□□□□□ -0.22
SMPD4-210ENST00000441135 CD5P06127 495 aa13.67□□□□□ -0.22
SMPD4-210ENST00000441135 IAPPP10997 89 aa13.67□□□□□ -0.22
SMPD4-210ENST00000441135 HAGHQ16775 308 aa13.67□□□□□ -0.22
SMPD4-210ENST00000441135 IAH1Q2TAA2 248 aaPredicted RBP13.67□□□□□ -0.22
SMPD4-210ENST00000441135 CITED4Q96RK1 184 aa13.67□□□□□ -0.22
SMPD4-210ENST00000441135 SPAG8Q99932 426 aaPredicted RBP13.67□□□□□ -0.22
SMPD4-210ENST00000441135 PUS1Q9Y606 427 aaKnown RBP eCLIP13.67□□□□□ -0.22
SMPD4-210ENST00000441135 TRAV14DV4A0A0A6YYC5 116 aa13.66□□□□□ -0.22
SMPD4-210ENST00000441135 TSPAN4O14817 238 aa13.66□□□□□ -0.22
SMPD4-210ENST00000441135 OR10J1P30954 320 aa13.66□□□□□ -0.22
SMPD4-210ENST00000441135 LAMTOR1Q6IAA8 161 aa13.66□□□□□ -0.22
SMPD4-210ENST00000441135 C12orf45Q8N5I9 185 aaPredicted RBP13.66□□□□□ -0.22
SMPD4-210ENST00000441135 ZBTB8BQ8NAP8 495 aaPredicted RBP13.66□□□□□ -0.22
SMPD4-210ENST00000441135 WDR89Q96FK6 387 aaPredicted RBP13.66□□□□□ -0.22
SMPD4-210ENST00000441135 SEC22CQ9BRL7 303 aa13.66□□□□□ -0.22
SMPD4-210ENST00000441135 MAGT1Q9H0U3 335 aa13.66□□□□□ -0.22
SMPD4-210ENST00000441135 WRBO00258 174 aa13.65□□□□□ -0.22
SMPD4-210ENST00000441135 CHEK1O14757 476 aa13.65□□□□□ -0.22
SMPD4-210ENST00000441135 PRAF2O60831 178 aa13.65□□□□□ -0.22
SMPD4-210ENST00000441135 SCAF4O95104 1147 aaKnown RBP13.65□□□□□ -0.22
SMPD4-210ENST00000441135 TAS2R30P59541 319 aa13.65□□□□□ -0.22
SMPD4-210ENST00000441135 RBPMS2Q6ZRY4 209 aaKnown RBP13.65□□□□□ -0.22
SMPD4-210ENST00000441135 NPIPB3Q92617 1050 aa13.65□□□□□ -0.22
SMPD4-210ENST00000441135 SLC35E1Q96K37 410 aa13.65□□□□□ -0.22
SMPD4-210ENST00000441135 SMIM8Q96KF7 97 aa13.65□□□□□ -0.22
SMPD4-210ENST00000441135 IGHV3OR16-8A0A075B7F1 116 aa13.64□□□□□ -0.23
SMPD4-210ENST00000441135 PRSS46E5RG02 174 aa13.64□□□□□ -0.23
SMPD4-210ENST00000441135 CD7P09564 240 aa13.64□□□□□ -0.23
SMPD4-210ENST00000441135 POLR2GP62487 172 aaKnown RBP eCLIP13.64□□□□□ -0.23
SMPD4-210ENST00000441135 TIGITQ495A1 244 aa13.64□□□□□ -0.23
SMPD4-210ENST00000441135 NRARPQ7Z6K4 114 aa13.64□□□□□ -0.23
SMPD4-210ENST00000441135 RAB40CQ96S21 281 aa13.64□□□□□ -0.23
SMPD4-210ENST00000441135 RHPN1-AS1Q9BWJ2 59 aa13.64□□□□□ -0.23
SMPD4-210ENST00000441135 TMEM231Q9H6L2 316 aa13.64□□□□□ -0.23
SMPD4-210ENST00000441135 VSIRQ9H7M9 311 aa13.64□□□□□ -0.23
SMPD4-210ENST00000441135 GPN1Q9HCN4 374 aaPredicted RBP13.64□□□□□ -0.23
SMPD4-210ENST00000441135 STRAPQ9Y3F4 350 aaKnown RBP13.64□□□□□ -0.23
SMPD4-210ENST00000441135 SNRPGP15A8MWD9 76 aa13.63□□□□□ -0.23
SMPD4-210ENST00000441135 OR11H12B2RN74 326 aa13.63□□□□□ -0.23
SMPD4-210ENST00000441135 ZNF207O43670 478 aaKnown RBP13.63□□□□□ -0.23
SMPD4-210ENST00000441135 LYL1P12980 280 aa13.63□□□□□ -0.23
SMPD4-210ENST00000441135 CRYBB3P26998 211 aa13.63□□□□□ -0.23
SMPD4-210ENST00000441135 GAMTQ14353 236 aa13.63□□□□□ -0.23
SMPD4-210ENST00000441135 LINC00322Q6ZN03 302 aaPredicted RBP13.63□□□□□ -0.23
SMPD4-210ENST00000441135 Q8WTZ3 238 aa13.63□□□□□ -0.23
SMPD4-210ENST00000441135 ACY3Q96HD9 319 aa13.63□□□□□ -0.23
SMPD4-210ENST00000441135 METTL26Q96S19 204 aa13.63□□□□□ -0.23
SMPD4-210ENST00000441135 MARVELD1Q9BSK0 173 aa13.63□□□□□ -0.23
SMPD4-210ENST00000441135 TSC22D2O75157 780 aa13.62□□□□□ -0.23
SMPD4-210ENST00000441135 TOMM40O96008 361 aa13.62□□□□□ -0.23
SMPD4-210ENST00000441135 NPPCP23582 126 aa13.62□□□□□ -0.23
SMPD4-210ENST00000441135 SPANXN5Q5MJ07 72 aa13.62□□□□□ -0.23
SMPD4-210ENST00000441135 CASC10Q5T4H9 136 aa13.62□□□□□ -0.23
SMPD4-210ENST00000441135 DEFB125Q8N687 156 aa13.62□□□□□ -0.23
SMPD4-210ENST00000441135 FAM110AQ9BQ89 295 aa13.62□□□□□ -0.23
SMPD4-210ENST00000441135 SRD5A3Q9H8P0 318 aa13.62□□□□□ -0.23
SMPD4-210ENST00000441135 EDA2RQ9HAV5 297 aa13.62□□□□□ -0.23
SMPD4-210ENST00000441135 RCL1Q9Y2P8 373 aaKnown RBP13.62□□□□□ -0.23
SMPD4-210ENST00000441135 A0A1W2PS18 150 aa13.61□□□□□ -0.23
SMPD4-210ENST00000441135 INMT-MINDY4F8WBC2 141 aa13.61□□□□□ -0.23
SMPD4-210ENST00000441135 SSSCA1O60232 199 aa13.61□□□□□ -0.23
SMPD4-210ENST00000441135 FABP1P07148 127 aa13.61□□□□□ -0.23
SMPD4-210ENST00000441135 FAM90A2PQ658T7 463 aa13.61□□□□□ -0.23
SMPD4-210ENST00000441135 TMEM14EPQ6UXP3 125 aa13.61□□□□□ -0.23
SMPD4-210ENST00000441135 THAP8Q8NA92 274 aa13.61□□□□□ -0.23
SMPD4-210ENST00000441135 C2orf50Q96LR7 162 aa13.61□□□□□ -0.23
SMPD4-210ENST00000441135 RNF2Q99496 336 aa13.61□□□□□ -0.23
SMPD4-210ENST00000441135 TRGV9Q99603 122 aa13.61□□□□□ -0.23
SMPD4-210ENST00000441135 PSENENQ9NZ42 101 aa13.61□□□□□ -0.23
SMPD4-210ENST00000441135 GSKIPQ9P0R6 139 aa13.61□□□□□ -0.23
SMPD4-210ENST00000441135 OR4C46A6NHA9 309 aa13.6□□□□□ -0.23
SMPD4-210ENST00000441135 CCSO14618 274 aa13.6□□□□□ -0.23
SMPD4-210ENST00000441135 MBPP02686 304 aaPredicted RBP13.6□□□□□ -0.23
SMPD4-210ENST00000441135 RD3LP0DJH9 198 aa13.6□□□□□ -0.23
SMPD4-210ENST00000441135 PAX9P55771 341 aa13.6□□□□□ -0.23
SMPD4-210ENST00000441135 GSG1LQ6UXU4 331 aa13.6□□□□□ -0.23
SMPD4-210ENST00000441135 NARS2Q96I59 477 aaKnown RBP13.6□□□□□ -0.23
SMPD4-210ENST00000441135 WFDC10AQ9H1F0 79 aa13.6□□□□□ -0.23
SMPD4-210ENST00000441135 PAIP2BQ9ULR5 123 aaKnown RBP13.6□□□□□ -0.23
SMPD4-210ENST00000441135 U3KQE9 123 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms