RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 FAM24BQ8N5W8 94 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 CCL17Q92583 94 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 RNASE6Q93091 150 aaKnown RBP2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 LEAP2Q969E1 77 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 ISOC2Q96AB3 205 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 LINC00479Q96M42 142 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 ZNF714Q96N38 554 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 PYGO2Q9BRQ0 406 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 MCRIP2Q9BUT9 160 aaKnown RBP2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 SLC25A22Q9H936 323 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 NPVFQ9HCQ7 196 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 DYNLRB1Q9NP97 96 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 MANBALQ9NQG1 85 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 KCNIP2Q9NS61 270 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 TMEM106BQ9NUM4 274 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 TMEM242Q9NWH2 141 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 FKBP11Q9NYL4 201 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 NAT8Q9UHE5 227 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 RPUSD1Q9UJJ7 312 aaKnown RBP2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 PRNDQ9UKY0 176 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 ZNF257Q9Y2Q1 563 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 OR51B2Q9Y5P1 312 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 KLF2Q9Y5W3 355 aaPredicted RBP2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 SMAD5-AS1Q9Y6J3 95 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 XIRP2A4UGR9 3374 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 MED13Q9UHV7 2174 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 ZDBF2Q9HCK1 2354 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 A0A087WZ39 114 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 A0A0J9YWU9 116 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 TEX50A0A1B0GTY4 177 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 KRTAP9-6A8MVA2 160 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 SHISA9B4DS77 424 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 SEC14L6B5MCN3 397 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 FNDC10F2Z333 226 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 F6UZH7 168 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 CLDN34H7C241 214 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 HMGB3O15347 200 aaKnown RBP2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 TGOLN2O43493 480 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 EIF3GO75821 320 aaKnown RBP eCLIP2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 YIF1AO95070 293 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 MT-CO2P00403 227 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 CA2P00918 260 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 APOA2P02652 100 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 NPY1RP25929 384 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 IL3RAP26951 378 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 RPL35P42766 123 aaKnown RBP2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 RPS10P46783 165 aaKnown RBP2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 AKR1D1P51857 326 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 RND2P52198 227 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 GNB1P62873 340 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 RPL31P62899 125 aaKnown RBP2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 PRCDQ00LT1 54 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 MEF2BQ02080 365 aaPredicted RBP2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 ELOBQ15370 118 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 TMEM249Q2WGJ8 235 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 C2orf83Q53S99 150 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 PRR30Q53SZ7 412 aaPredicted RBP2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 MIC13Q5XKP0 118 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 WDR25Q64LD2 544 aaPredicted RBP2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 FAM71F2Q6NXP2 309 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 LYPD2Q6UXB3 125 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 ZNF833PQ6ZTB9 187 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 IQCF2Q8IXL9 164 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 ZCCHC24Q8N2G6 241 aaKnown RBP2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 LINC00311Q8N616 119 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 C8orf31Q8N9H6 132 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 OR13D1Q8NGV5 346 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 OR4F5Q8NH21 305 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 NANPQ8TBE9 248 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 ZNF596Q8TC21 504 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 GATAD1Q8WUU5 269 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 H1FXQ92522 213 aaKnown RBP2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 RAB1CQ92928 201 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 YPEL4Q96NS1 127 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 OR4F4Q96R69 305 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 MGST2Q99735 147 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 SMIM7Q9BQ49 75 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 TXNDC17Q9BRA2 123 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 HINT2Q9BX68 163 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 FNDC4Q9H6D8 234 aaPredicted RBP2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 PLEKHA3Q9HB20 300 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 TMEM14BQ9NUH8 114 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 BET1LQ9NYM9 111 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 KAAG1Q9UBP8 84 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 PXMP4Q9Y6I8 212 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 PTPRBP23467 1997 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 FREM1Q5H8C1 2179 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 SZT2Q5T011 3432 aa2.7□□□□□ -1.98
HMGB3P11-201ENST00000440127 GPR179Q6PRD1 2367 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 MYO7BQ6PIF6 2116 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 LAMA3Q16787 3333 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 UNC80Q8N2C7 3258 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 TGIF2-C20orf24A0A0A6YYL0 155 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 IGHV1-69-2A0A0G2JMI3 117 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 ZNF98A6NK75 572 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 C11orf94C9JXX5 98 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 INS-IGF2F8WCM5 200 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 H0YJW9 148 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 CCL21O00585 134 aa2.69□□□□□ -1.98
HMGB3P11-201ENST00000440127 PDE6DO43924 150 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms