RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 C2orf83Q53S99 150 aa14.72□□□□□ -0.05
SHROOM1-204ENST00000440118 ETFRF1Q6IPR1 90 aa14.72□□□□□ -0.05
SHROOM1-204ENST00000440118 KIR2DL5AQ8N109 375 aa14.72□□□□□ -0.05
SHROOM1-204ENST00000440118 KIR2DL5BQ8NHK3 375 aa14.72□□□□□ -0.05
SHROOM1-204ENST00000440118 RNASEH2CQ8TDP1 164 aaKnown RBP14.72□□□□□ -0.05
SHROOM1-204ENST00000440118 GRAMD2BQ96HH9 432 aa14.72□□□□□ -0.05
SHROOM1-204ENST00000440118 SOSTQ9BQB4 213 aa14.72□□□□□ -0.05
SHROOM1-204ENST00000440118 SHPKQ9UHJ6 478 aa14.72□□□□□ -0.05
SHROOM1-204ENST00000440118 STARD9Q9P2P6 4700 aa14.71□□□□□ -0.05
SHROOM1-204ENST00000440118 DFFBO76075 338 aa14.71□□□□□ -0.05
SHROOM1-204ENST00000440118 JTBO76095 146 aa14.71□□□□□ -0.05
SHROOM1-204ENST00000440118 APOHP02749 345 aaPredicted RBP14.71□□□□□ -0.05
SHROOM1-204ENST00000440118 CCR6P51684 374 aa14.71□□□□□ -0.05
SHROOM1-204ENST00000440118 KLF9Q13886 244 aaPredicted RBP14.71□□□□□ -0.05
SHROOM1-204ENST00000440118 SMCO1Q147U7 214 aa14.71□□□□□ -0.05
SHROOM1-204ENST00000440118 RGS21Q2M5E4 152 aa14.71□□□□□ -0.05
SHROOM1-204ENST00000440118 OR1S2Q8NGQ3 325 aa14.71□□□□□ -0.05
SHROOM1-204ENST00000440118 OR1S1Q8NH92 325 aa14.71□□□□□ -0.05
SHROOM1-204ENST00000440118 VSIRQ9H7M9 311 aa14.71□□□□□ -0.05
SHROOM1-204ENST00000440118 MAP6D1Q9H9H5 199 aa14.71□□□□□ -0.05
SHROOM1-204ENST00000440118 TP53TG1Q9Y2A0 90 aa14.71□□□□□ -0.05
SHROOM1-204ENST00000440118 VAMP1P23763 118 aa14.7□□□□□ -0.06
SHROOM1-204ENST00000440118 OR10J1P30954 320 aa14.7□□□□□ -0.06
SHROOM1-204ENST00000440118 INPP1P49441 399 aa14.7□□□□□ -0.06
SHROOM1-204ENST00000440118 ZNF124Q15973 351 aa14.7□□□□□ -0.06
SHROOM1-204ENST00000440118 FAM90A2PQ658T7 463 aa14.7□□□□□ -0.06
SHROOM1-204ENST00000440118 STXBP6Q8NFX7 210 aa14.7□□□□□ -0.06
SHROOM1-204ENST00000440118 TRIM63Q969Q1 353 aa14.7□□□□□ -0.06
SHROOM1-204ENST00000440118 CCDC32Q9BV29 185 aa14.7□□□□□ -0.06
SHROOM1-204ENST00000440118 MS4A6AQ9H2W1 248 aa14.7□□□□□ -0.06
SHROOM1-204ENST00000440118 EIF2B2P49770 351 aaKnown RBP14.69□□□□□ -0.06
SHROOM1-204ENST00000440118 TNFRSF9Q07011 255 aa14.69□□□□□ -0.06
SHROOM1-204ENST00000440118 PRSS54Q6PEW0 395 aa14.69□□□□□ -0.06
SHROOM1-204ENST00000440118 LYZL2Q7Z4W2 148 aa14.69□□□□□ -0.06
SHROOM1-204ENST00000440118 DTD1Q8TEA8 209 aa14.69□□□□□ -0.06
SHROOM1-204ENST00000440118 Q8WTZ3 238 aa14.69□□□□□ -0.06
SHROOM1-204ENST00000440118 ACY3Q96HD9 319 aa14.69□□□□□ -0.06
SHROOM1-204ENST00000440118 V9GYH0 126 aa14.69□□□□□ -0.06
SHROOM1-204ENST00000440118 A0A0J9YWU9 116 aa14.68□□□□□ -0.06
SHROOM1-204ENST00000440118 CXorf65A6NEN9 183 aa14.68□□□□□ -0.06
SHROOM1-204ENST00000440118 IGKV1-17P01599 117 aa14.68□□□□□ -0.06
SHROOM1-204ENST00000440118 P2RY1P47900 373 aa14.68□□□□□ -0.06
SHROOM1-204ENST00000440118 SUPT4H1P63272 117 aaKnown RBP14.68□□□□□ -0.06
SHROOM1-204ENST00000440118 PMS2P11Q13670 270 aa14.68□□□□□ -0.06
SHROOM1-204ENST00000440118 NMSQ5H8A3 153 aa14.68□□□□□ -0.06
SHROOM1-204ENST00000440118 LYG2Q86SG7 212 aa14.68□□□□□ -0.06
SHROOM1-204ENST00000440118 RYR2Q92736 4967 aa14.67□□□□□ -0.06
SHROOM1-204ENST00000440118 MPTX1A8MV57 137 aa14.67□□□□□ -0.06
SHROOM1-204ENST00000440118 IFNA4P05014 189 aa14.67□□□□□ -0.06
SHROOM1-204ENST00000440118 IGLC1P0CG04 106 aa14.67□□□□□ -0.06
SHROOM1-204ENST00000440118 TMEM128Q5BJH2 165 aa14.67□□□□□ -0.06
SHROOM1-204ENST00000440118 LEMD1Q68G75 181 aa14.67□□□□□ -0.06
SHROOM1-204ENST00000440118 TMEM217Q8N7C4 229 aa14.67□□□□□ -0.06
SHROOM1-204ENST00000440118 RNF183Q96D59 192 aa14.67□□□□□ -0.06
SHROOM1-204ENST00000440118 CSTL1Q9H114 145 aa14.67□□□□□ -0.06
SHROOM1-204ENST00000440118 RBKSQ9H477 322 aa14.67□□□□□ -0.06
SHROOM1-204ENST00000440118 HSPB7Q9UBY9 170 aa14.67□□□□□ -0.06
SHROOM1-204ENST00000440118 U3KQ87 197 aa14.67□□□□□ -0.06
SHROOM1-204ENST00000440118 SACSQ9NZJ4 4579 aa14.66□□□□□ -0.06
SHROOM1-204ENST00000440118 TRAV2A0A0B4J234 112 aa14.66□□□□□ -0.06
SHROOM1-204ENST00000440118 CRYBB3P26998 211 aa14.66□□□□□ -0.06
SHROOM1-204ENST00000440118 DEFB131AP59861 70 aa14.66□□□□□ -0.06
SHROOM1-204ENST00000440118 ZNF79Q15937 498 aa14.66□□□□□ -0.06
SHROOM1-204ENST00000440118 CCDC190Q86UF4 302 aa14.66□□□□□ -0.06
SHROOM1-204ENST00000440118 LILRB2Q8N423 598 aa14.66□□□□□ -0.06
SHROOM1-204ENST00000440118 SLC25A21Q9BQT8 299 aaPredicted RBP14.66□□□□□ -0.06
SHROOM1-204ENST00000440118 PAIP2BQ9ULR5 123 aaKnown RBP14.66□□□□□ -0.06
SHROOM1-204ENST00000440118 DUXBA0A1W2PPF3 345 aa14.65□□□□□ -0.06
SHROOM1-204ENST00000440118 IL4P05112 153 aa14.65□□□□□ -0.06
SHROOM1-204ENST00000440118 HNRNPCP07910 306 aaKnown RBP eCLIP14.65□□□□□ -0.06
SHROOM1-204ENST00000440118 YPEL3P61236 119 aaPredicted RBP14.65□□□□□ -0.06
SHROOM1-204ENST00000440118 TRIQKQ629K1 86 aa14.65□□□□□ -0.06
SHROOM1-204ENST00000440118 DEDD2Q8WXF8 326 aa14.65□□□□□ -0.06
SHROOM1-204ENST00000440118 NPIPB3Q92617 1050 aa14.65□□□□□ -0.06
SHROOM1-204ENST00000440118 PPP1R14BQ96C90 147 aa14.65□□□□□ -0.06
SHROOM1-204ENST00000440118 SLC35E1Q96K37 410 aa14.65□□□□□ -0.06
SHROOM1-204ENST00000440118 HELTA6NFD8 242 aa14.64□□□□□ -0.07
SHROOM1-204ENST00000440118 CA1P00915 261 aaPredicted RBP14.64□□□□□ -0.07
SHROOM1-204ENST00000440118 STHQ8IWL8 128 aa14.64□□□□□ -0.07
SHROOM1-204ENST00000440118 CENPSQ8N2Z9 138 aa14.64□□□□□ -0.07
SHROOM1-204ENST00000440118 TMEM170AQ8WVE7 144 aa14.64□□□□□ -0.07
SHROOM1-204ENST00000440118 LYSTQ99698 3801 aa14.64□□□□□ -0.07
SHROOM1-204ENST00000440118 UPK1BO75841 260 aa14.63□□□□□ -0.07
SHROOM1-204ENST00000440118 RD3LP0DJH9 198 aa14.63□□□□□ -0.07
SHROOM1-204ENST00000440118 RBMS2Q15434 407 aaKnown RBP14.63□□□□□ -0.07
SHROOM1-204ENST00000440118 FAM24BQ8N5W8 94 aa14.63□□□□□ -0.07
SHROOM1-204ENST00000440118 ZFP92A6NM28 416 aa14.62□□□□□ -0.07
SHROOM1-204ENST00000440118 TOMM40O96008 361 aa14.62□□□□□ -0.07
SHROOM1-204ENST00000440118 ZNF688P0C7X2 276 aa14.62□□□□□ -0.07
SHROOM1-204ENST00000440118 IAPPP10997 89 aa14.62□□□□□ -0.07
SHROOM1-204ENST00000440118 ATP5IP56385 69 aaPredicted RBP14.62□□□□□ -0.07
SHROOM1-204ENST00000440118 RAB11AP62491 216 aa14.62□□□□□ -0.07
SHROOM1-204ENST00000440118 DHRS2Q13268 280 aa14.62□□□□□ -0.07
SHROOM1-204ENST00000440118 GATAD1Q8WUU5 269 aa14.62□□□□□ -0.07
SHROOM1-204ENST00000440118 NUPR2A6NF83 97 aa14.61□□□□□ -0.07
SHROOM1-204ENST00000440118 MED6O75586 246 aa14.61□□□□□ -0.07
SHROOM1-204ENST00000440118 AP2S1P53680 142 aaPredicted RBP14.61□□□□□ -0.07
SHROOM1-204ENST00000440118 PPP1R1AQ13522 171 aa14.61□□□□□ -0.07
SHROOM1-204ENST00000440118 RARRES2Q99969 163 aa14.61□□□□□ -0.07
SHROOM1-204ENST00000440118 PBDC1Q9BVG4 233 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms