RNA–Protein interactions for RNA: ENST00000439984.7

PCNX1-202, Transcript of pecanex 1, humanhuman

TSL 1 (best) BASIC

Gene PCNX1, Length 6,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-202ENST00000439984 C19orf54Q5BKX5 351 aa12.2□□□□□ -0.46
PCNX1-202ENST00000439984 PSMG4Q5JS54 123 aa12.2□□□□□ -0.46
PCNX1-202ENST00000439984 DLX4Q92988 240 aaPredicted RBP12.2□□□□□ -0.46
PCNX1-202ENST00000439984 SSBP2P81877 361 aaPredicted RBP12.2□□□□□ -0.46
PCNX1-202ENST00000439984 SMRP1Q8NCR6 262 aa12.2□□□□□ -0.46
PCNX1-202ENST00000439984 PGPEP1Q9NXJ5 209 aa12.2□□□□□ -0.46
PCNX1-202ENST00000439984 TDRG1Q3Y452 100 aa12.19□□□□□ -0.46
PCNX1-202ENST00000439984 CIARTQ8N365 385 aaPredicted RBP12.19□□□□□ -0.46
PCNX1-202ENST00000439984 IGHV2OR16-5A0A0B4J2B6 119 aa12.19□□□□□ -0.46
PCNX1-202ENST00000439984 CSRP2Q16527 193 aa12.19□□□□□ -0.46
PCNX1-202ENST00000439984 CD300EQ496F6 205 aaPredicted RBP12.19□□□□□ -0.46
PCNX1-202ENST00000439984 OR13C6PQ8NH95 151 aa12.19□□□□□ -0.46
PCNX1-202ENST00000439984 CHTOPQ9Y3Y2 248 aaKnown RBP12.19□□□□□ -0.46
PCNX1-202ENST00000439984 E9PQ18 207 aa12.19□□□□□ -0.46
PCNX1-202ENST00000439984 H3BRM9 83 aa12.19□□□□□ -0.46
PCNX1-202ENST00000439984 SMAD7O15105 426 aaKnown RBP12.19□□□□□ -0.46
PCNX1-202ENST00000439984 Q6AWC8 147 aa12.19□□□□□ -0.46
PCNX1-202ENST00000439984 IGHV3-49A0A0A0MS15 119 aa12.19□□□□□ -0.46
PCNX1-202ENST00000439984 IGHV2-26A0A0B4J1V2 119 aa12.19□□□□□ -0.46
PCNX1-202ENST00000439984 SAP30O75446 220 aa12.19□□□□□ -0.46
PCNX1-202ENST00000439984 TRGV8A0A0C4DH27 118 aa12.19□□□□□ -0.46
PCNX1-202ENST00000439984 FAM71F2Q6NXP2 309 aa12.19□□□□□ -0.46
PCNX1-202ENST00000439984 C18orf32Q8TCD1 76 aa12.19□□□□□ -0.46
PCNX1-202ENST00000439984 CHAC1Q9BUX1 264 aa12.19□□□□□ -0.46
PCNX1-202ENST00000439984 IGKV1-27A0A075B6S5 117 aa12.19□□□□□ -0.46
PCNX1-202ENST00000439984 K7EP34 96 aa12.19□□□□□ -0.46
PCNX1-202ENST00000439984 MFAP4P55083 255 aa12.19□□□□□ -0.46
PCNX1-202ENST00000439984 KLHDC3Q9BQ90 382 aa12.19□□□□□ -0.46
PCNX1-202ENST00000439984 EDA2RQ9HAV5 297 aa12.19□□□□□ -0.46
PCNX1-202ENST00000439984 IGHV3-64A0A075B6Q5 118 aa12.18□□□□□ -0.46
PCNX1-202ENST00000439984 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.18□□□□□ -0.46
PCNX1-202ENST00000439984 DEFB104AQ8WTQ1 72 aa12.18□□□□□ -0.46
PCNX1-202ENST00000439984 ZNF726P1Q15940 193 aa12.18□□□□□ -0.46
PCNX1-202ENST00000439984 FOXA2Q9Y261 457 aaPredicted RBP12.17□□□□□ -0.46
PCNX1-202ENST00000439984 TRAV17A0A0B4J275 112 aa12.17□□□□□ -0.46
PCNX1-202ENST00000439984 KIR2DL5BA0A0G2JN68 375 aa12.17□□□□□ -0.46
PCNX1-202ENST00000439984 KIR2DL5BA0A0G2JPC4 375 aa12.17□□□□□ -0.46
PCNX1-202ENST00000439984 FAM201AQ5SY85 155 aa12.17□□□□□ -0.46
PCNX1-202ENST00000439984 ACP7Q6ZNF0 438 aa12.17□□□□□ -0.46
PCNX1-202ENST00000439984 KIR2DL5AQ8N109 375 aa12.17□□□□□ -0.46
PCNX1-202ENST00000439984 METTL26Q96S19 204 aa12.17□□□□□ -0.46
PCNX1-202ENST00000439984 PTPRDP23468 1912 aa12.17□□□□□ -0.46
PCNX1-202ENST00000439984 IGHV1-45A0A0A0MS14 117 aa12.17□□□□□ -0.46
PCNX1-202ENST00000439984 CYYR1Q96J86 154 aa12.17□□□□□ -0.46
PCNX1-202ENST00000439984 RALGAPA1Q6GYQ0 2036 aa12.17□□□□□ -0.46
PCNX1-202ENST00000439984 SPEM2Q0P670 501 aa12.17□□□□□ -0.46
PCNX1-202ENST00000439984 BVES-AS1Q5T3Y7 98 aa12.17□□□□□ -0.46
PCNX1-202ENST00000439984 TMEM14EPQ6UXP3 125 aa12.17□□□□□ -0.46
PCNX1-202ENST00000439984 Q6ZRM9 215 aa12.17□□□□□ -0.46
PCNX1-202ENST00000439984 PSMB11A5LHX3 300 aa12.17□□□□□ -0.46
PCNX1-202ENST00000439984 NPIPB6E9PJ23 425 aa12.17□□□□□ -0.46
PCNX1-202ENST00000439984 LINC00479Q96M42 142 aa12.17□□□□□ -0.46
PCNX1-202ENST00000439984 TNFRSF6BO95407 300 aa12.17□□□□□ -0.46
PCNX1-202ENST00000439984 IGKV3OR2-268A0A0C4DH90 116 aa12.16□□□□□ -0.46
PCNX1-202ENST00000439984 C1QTNF5Q9BXJ0 243 aa12.16□□□□□ -0.46
PCNX1-202ENST00000439984 SYT8Q8NBV8 401 aa12.16□□□□□ -0.46
PCNX1-202ENST00000439984 SLC25A2Q9BXI2 301 aa12.16□□□□□ -0.46
PCNX1-202ENST00000439984 RCHY1Q96PM5 261 aa12.16□□□□□ -0.46
PCNX1-202ENST00000439984 OTORQ9NRC9 128 aa12.16□□□□□ -0.46
PCNX1-202ENST00000439984 C15orf61A6NNL5 157 aa12.16□□□□□ -0.46
PCNX1-202ENST00000439984 ESPL1Q14674 2120 aa12.16□□□□□ -0.46
PCNX1-202ENST00000439984 ASCL5Q7RTU5 278 aa12.16□□□□□ -0.46
PCNX1-202ENST00000439984 F2RL2O00254 374 aa12.16□□□□□ -0.46
PCNX1-202ENST00000439984 PMS2CLQ68D20 193 aa12.16□□□□□ -0.46
PCNX1-202ENST00000439984 RASL11AQ6T310 242 aa12.15□□□□□ -0.46
PCNX1-202ENST00000439984 REPIN1Q9BWE0 567 aaKnown RBP12.15□□□□□ -0.46
PCNX1-202ENST00000439984 NPIPB11E5RHQ5 1161 aa12.15□□□□□ -0.46
PCNX1-202ENST00000439984 ASPHD1Q5U4P2 390 aa12.15□□□□□ -0.46
PCNX1-202ENST00000439984 ZNF114Q8NC26 417 aa12.15□□□□□ -0.46
PCNX1-202ENST00000439984 PLXNA3P51805 1871 aa12.15□□□□□ -0.46
PCNX1-202ENST00000439984 NPC2P61916 151 aa12.15□□□□□ -0.46
PCNX1-202ENST00000439984 KLF17Q5JT82 389 aaPredicted RBP12.15□□□□□ -0.46
PCNX1-202ENST00000439984 ERG28Q9UKR5 140 aa12.15□□□□□ -0.46
PCNX1-202ENST00000439984 IGKV3D-20A0A0C4DH25 116 aa12.15□□□□□ -0.46
PCNX1-202ENST00000439984 IFI27P40305 119 aaPredicted RBP12.15□□□□□ -0.46
PCNX1-202ENST00000439984 SUMO2P61956 95 aaKnown RBP12.15□□□□□ -0.46
PCNX1-202ENST00000439984 GFRALQ6UXV0 394 aa12.15□□□□□ -0.46
PCNX1-202ENST00000439984 ASCL2Q99929 193 aa12.15□□□□□ -0.46
PCNX1-202ENST00000439984 ZNF497Q6ZNH5 498 aa12.14□□□□□ -0.47
PCNX1-202ENST00000439984 HAPLN4Q86UW8 402 aa12.14□□□□□ -0.47
PCNX1-202ENST00000439984 C1RLQ9NZP8 487 aa12.14□□□□□ -0.47
PCNX1-202ENST00000439984 PSG8Q9UQ74 426 aa12.14□□□□□ -0.47
PCNX1-202ENST00000439984 ICE1Q9Y2F5 2266 aa12.14□□□□□ -0.47
PCNX1-202ENST00000439984 RPRMLQ8N4K4 120 aa12.14□□□□□ -0.47
PCNX1-202ENST00000439984 ARPC1AQ92747 370 aa12.14□□□□□ -0.47
PCNX1-202ENST00000439984 NXT2Q9NPJ8 142 aaKnown RBP12.14□□□□□ -0.47
PCNX1-202ENST00000439984 SMKR1H3BMG3 65 aa12.14□□□□□ -0.47
PCNX1-202ENST00000439984 ATP5IP56385 69 aaPredicted RBP12.14□□□□□ -0.47
PCNX1-202ENST00000439984 ZC2HC1BQ5TFG8 222 aa12.14□□□□□ -0.47
PCNX1-202ENST00000439984 PILRBQ9UKJ0 227 aa12.14□□□□□ -0.47
PCNX1-202ENST00000439984 NLRC5Q86WI3 1866 aa12.14□□□□□ -0.47
PCNX1-202ENST00000439984 SAA1P0DJI8 122 aaPredicted RBP12.14□□□□□ -0.47
PCNX1-202ENST00000439984 NTF4P34130 210 aa12.14□□□□□ -0.47
PCNX1-202ENST00000439984 LINC00205P59089 165 aa12.14□□□□□ -0.47
PCNX1-202ENST00000439984 CACNG8Q8WXS5 425 aa12.14□□□□□ -0.47
PCNX1-202ENST00000439984 ARRDC1-AS1Q9H2J1 176 aa12.14□□□□□ -0.47
PCNX1-202ENST00000439984 B5MCH6 92 aa12.13□□□□□ -0.47
PCNX1-202ENST00000439984 SRSF1Q07955 248 aaKnown RBP eCLIP12.13□□□□□ -0.47
PCNX1-202ENST00000439984 IGLC7A0M8Q6 106 aa12.13□□□□□ -0.47
PCNX1-202ENST00000439984 IGKV3-20P01619 116 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms