RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 GGTLC3B5MD39 225 aa9.61□□□□□ -0.87
SMPD4-209ENST00000439886 COX7A2P2O60397 106 aa9.61□□□□□ -0.87
SMPD4-209ENST00000439886 SLC25A5P05141 298 aaKnown RBP9.61□□□□□ -0.87
SMPD4-209ENST00000439886 TM4SF20Q53R12 229 aa9.61□□□□□ -0.87
SMPD4-209ENST00000439886 RBMXL3Q8N7X1 1067 aaKnown RBP9.61□□□□□ -0.87
SMPD4-209ENST00000439886 RNF183Q96D59 192 aa9.61□□□□□ -0.87
SMPD4-209ENST00000439886 DUSP23Q9BVJ7 150 aa9.61□□□□□ -0.87
SMPD4-209ENST00000439886 OSTCQ9NRP0 149 aa9.61□□□□□ -0.87
SMPD4-209ENST00000439886 IGHV3-21A0A0B4J1V1 117 aa9.61□□□□□ -0.87
SMPD4-209ENST00000439886 J3QR06 171 aa9.61□□□□□ -0.87
SMPD4-209ENST00000439886 ORM2P19652 201 aa9.61□□□□□ -0.87
SMPD4-209ENST00000439886 DUTP33316 252 aaKnown RBP9.61□□□□□ -0.87
SMPD4-209ENST00000439886 MPV17P39210 176 aa9.61□□□□□ -0.87
SMPD4-209ENST00000439886 RPL32P62910 135 aaKnown RBP9.61□□□□□ -0.87
SMPD4-209ENST00000439886 Q6ZR03 302 aa9.61□□□□□ -0.87
SMPD4-209ENST00000439886 ZNRF1Q8ND25 227 aa9.61□□□□□ -0.87
SMPD4-209ENST00000439886 NUP35Q8NFH5 326 aa9.61□□□□□ -0.87
SMPD4-209ENST00000439886 A4D1N5 150 aa9.61□□□□□ -0.87
SMPD4-209ENST00000439886 C9JCJ5 164 aa9.61□□□□□ -0.87
SMPD4-209ENST00000439886 TMPRSS3P57727 454 aa9.61□□□□□ -0.87
SMPD4-209ENST00000439886 Q8N7P7 452 aa9.61□□□□□ -0.87
SMPD4-209ENST00000439886 OR2K2Q8NGT1 345 aa9.61□□□□□ -0.87
SMPD4-209ENST00000439886 SNRNP40Q96DI7 357 aaKnown RBP9.61□□□□□ -0.87
SMPD4-209ENST00000439886 JKAMPQ9P055 326 aa9.61□□□□□ -0.87
SMPD4-209ENST00000439886 PCNX2A6NKB5 2137 aa9.6□□□□□ -0.87
SMPD4-209ENST00000439886 NPIPB11E5RHQ5 1161 aa9.6□□□□□ -0.87
SMPD4-209ENST00000439886 ISLRO14498 428 aa9.6□□□□□ -0.87
SMPD4-209ENST00000439886 KRTAP27-1Q3LI81 207 aa9.6□□□□□ -0.87
SMPD4-209ENST00000439886 COX19Q49B96 90 aa9.6□□□□□ -0.87
SMPD4-209ENST00000439886 LINC00470Q9BZP3 86 aa9.6□□□□□ -0.87
SMPD4-209ENST00000439886 MRPS17Q9Y2R5 130 aaKnown RBP9.6□□□□□ -0.87
SMPD4-209ENST00000439886 PLCE1Q9P212 2302 aa9.6□□□□□ -0.87
SMPD4-209ENST00000439886 WNK2Q9Y3S1 2297 aa9.6□□□□□ -0.87
SMPD4-209ENST00000439886 CFHR2P36980 270 aa9.6□□□□□ -0.87
SMPD4-209ENST00000439886 PET117Q6UWS5 81 aa9.6□□□□□ -0.87
SMPD4-209ENST00000439886 OR4F17Q8NGA8 305 aa9.6□□□□□ -0.87
SMPD4-209ENST00000439886 OR8A1Q8NGG7 326 aa9.6□□□□□ -0.87
SMPD4-209ENST00000439886 CDX2Q99626 313 aaPredicted RBP9.6□□□□□ -0.87
SMPD4-209ENST00000439886 TBR1Q16650 682 aa9.6□□□□□ -0.87
SMPD4-209ENST00000439886 VWC2Q2TAL6 325 aa9.6□□□□□ -0.87
SMPD4-209ENST00000439886 NRN1LQ496H8 165 aa9.6□□□□□ -0.87
SMPD4-209ENST00000439886 TCTEX1D4Q5JR98 221 aa9.6□□□□□ -0.87
SMPD4-209ENST00000439886 FAM201AQ5SY85 155 aa9.6□□□□□ -0.87
SMPD4-209ENST00000439886 MAP1LC3CQ9BXW4 147 aa9.6□□□□□ -0.87
SMPD4-209ENST00000439886 TNFRSF18Q9Y5U5 241 aa9.6□□□□□ -0.87
SMPD4-209ENST00000439886 COL4A2P08572 1712 aa9.59□□□□□ -0.87
SMPD4-209ENST00000439886 MED13Q9UHV7 2174 aa9.59□□□□□ -0.87
SMPD4-209ENST00000439886 LOC389332A0A1B0GUA5 103 aa9.59□□□□□ -0.87
SMPD4-209ENST00000439886 CD5LO43866 347 aa9.59□□□□□ -0.87
SMPD4-209ENST00000439886 SLC35E4Q6ICL7 350 aa9.59□□□□□ -0.87
SMPD4-209ENST00000439886 SPATA12Q7Z6I5 190 aa9.59□□□□□ -0.87
SMPD4-209ENST00000439886 BPIFA4PQ86YQ2 179 aa9.59□□□□□ -0.87
SMPD4-209ENST00000439886 SMRP1Q8NCR6 262 aa9.59□□□□□ -0.87
SMPD4-209ENST00000439886 FLYWCH2Q96CP2 140 aaKnown RBP9.59□□□□□ -0.87
SMPD4-209ENST00000439886 ANAPC13Q9BS18 74 aa9.59□□□□□ -0.87
SMPD4-209ENST00000439886 PATE3B3GLJ2 98 aa9.59□□□□□ -0.87
SMPD4-209ENST00000439886 AREGP15514 252 aa9.59□□□□□ -0.87
SMPD4-209ENST00000439886 Q0VFX4 171 aa9.59□□□□□ -0.87
SMPD4-209ENST00000439886 FER1L6-AS2Q96M78 137 aa9.59□□□□□ -0.87
SMPD4-209ENST00000439886 ASCL2Q99929 193 aa9.59□□□□□ -0.87
SMPD4-209ENST00000439886 SPCS1Q9Y6A9 102 aa9.59□□□□□ -0.87
SMPD4-209ENST00000439886 FTH1P19P0C7X4 201 aa9.58□□□□□ -0.88
SMPD4-209ENST00000439886 HTR1DP28221 377 aa9.58□□□□□ -0.88
SMPD4-209ENST00000439886 FXYD7P58549 80 aa9.58□□□□□ -0.88
SMPD4-209ENST00000439886 HSPE1P61604 102 aaKnown RBP9.58□□□□□ -0.88
SMPD4-209ENST00000439886 MRPL16Q9NX20 251 aaKnown RBP9.58□□□□□ -0.88
SMPD4-209ENST00000439886 LSM4Q9Y4Z0 139 aaKnown RBP9.58□□□□□ -0.88
SMPD4-209ENST00000439886 OR11H12B2RN74 326 aa9.58□□□□□ -0.88
SMPD4-209ENST00000439886 C8orf88P0DMB2 117 aa9.58□□□□□ -0.88
SMPD4-209ENST00000439886 PRDX2P32119 198 aa9.58□□□□□ -0.88
SMPD4-209ENST00000439886 CXCL12P48061 93 aa9.58□□□□□ -0.88
SMPD4-209ENST00000439886 OR11H1Q8NG94 326 aa9.58□□□□□ -0.88
SMPD4-209ENST00000439886 OR11H2Q8NH07 326 aa9.58□□□□□ -0.88
SMPD4-209ENST00000439886 KLF14Q8TD94 323 aaPredicted RBP9.58□□□□□ -0.88
SMPD4-209ENST00000439886 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.58□□□□□ -0.88
SMPD4-209ENST00000439886 SRFP11831 508 aa9.58□□□□□ -0.88
SMPD4-209ENST00000439886 REG1BP48304 166 aa9.58□□□□□ -0.88
SMPD4-209ENST00000439886 GAGE5Q13069 117 aa9.58□□□□□ -0.88
SMPD4-209ENST00000439886 GAGE6Q13070 117 aa9.58□□□□□ -0.88
SMPD4-209ENST00000439886 ZNF146Q15072 292 aa9.58□□□□□ -0.88
SMPD4-209ENST00000439886 ANXA2RQ3ZCQ2 193 aa9.58□□□□□ -0.88
SMPD4-209ENST00000439886 INO80CQ6PI98 192 aaPredicted RBP9.58□□□□□ -0.88
SMPD4-209ENST00000439886 PAXXQ9BUH6 204 aa9.58□□□□□ -0.88
SMPD4-209ENST00000439886 NPFFR1Q9GZQ6 430 aa9.58□□□□□ -0.88
SMPD4-209ENST00000439886 F11RQ9Y624 299 aaKnown RBP9.58□□□□□ -0.88
SMPD4-209ENST00000439886 PCNX1Q96RV3 2341 aa9.57□□□□□ -0.88
SMPD4-209ENST00000439886 LOC102723996A0A087X1L8 192 aa9.57□□□□□ -0.88
SMPD4-209ENST00000439886 OR5AL1P0C617 328 aa9.57□□□□□ -0.88
SMPD4-209ENST00000439886 IL11RAQ14626 422 aa9.57□□□□□ -0.88
SMPD4-209ENST00000439886 GDF5OSQ5U4N7 250 aa9.57□□□□□ -0.88
SMPD4-209ENST00000439886 MORN5Q5VZ52 161 aa9.57□□□□□ -0.88
SMPD4-209ENST00000439886 OR10AG1Q8NH19 301 aa9.57□□□□□ -0.88
SMPD4-209ENST00000439886 Q8TCH9 128 aa9.57□□□□□ -0.88
SMPD4-209ENST00000439886 ZNRD1Q9P1U0 126 aa9.57□□□□□ -0.88
SMPD4-209ENST00000439886 NAV3Q8IVL0 2385 aa9.57□□□□□ -0.88
SMPD4-209ENST00000439886 A0A1W2PRE2 83 aa9.57□□□□□ -0.88
SMPD4-209ENST00000439886 PGPA6NDG6 321 aa9.57□□□□□ -0.88
SMPD4-209ENST00000439886 M0QXV9 152 aa9.57□□□□□ -0.88
SMPD4-209ENST00000439886 TSPAN13O95857 204 aa9.57□□□□□ -0.88
SMPD4-209ENST00000439886 VDAC2P45880 294 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms