RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 OR1L8Q8NGR8 309 aa7.4□□□□□ -1.22
COPB1-202ENST00000439561 ADTRPQ96IZ2 230 aa7.4□□□□□ -1.22
COPB1-202ENST00000439561 HILPDAQ9Y5L2 63 aa7.4□□□□□ -1.22
COPB1-202ENST00000439561 KIAA1549Q9HCM3 1950 aa7.4□□□□□ -1.23
COPB1-202ENST00000439561 ARF6P62330 175 aa7.4□□□□□ -1.23
COPB1-202ENST00000439561 RBX1P62877 108 aa7.4□□□□□ -1.23
COPB1-202ENST00000439561 PLGLAQ15195 96 aa7.4□□□□□ -1.23
COPB1-202ENST00000439561 TM4SF20Q53R12 229 aa7.4□□□□□ -1.23
COPB1-202ENST00000439561 FNDC4Q9H6D8 234 aaPredicted RBP7.4□□□□□ -1.23
COPB1-202ENST00000439561 PROCRQ9UNN8 238 aa7.4□□□□□ -1.23
COPB1-202ENST00000439561 CACNA1HO95180 2353 aa7.39□□□□□ -1.23
COPB1-202ENST00000439561 IGKV1OR2-108A0A075B7D4 117 aa7.39□□□□□ -1.23
COPB1-202ENST00000439561 TEX50A0A1B0GTY4 177 aa7.39□□□□□ -1.23
COPB1-202ENST00000439561 SMIM27A0A1W2PRY6 76 aa7.39□□□□□ -1.23
COPB1-202ENST00000439561 C9orf172C9J069 976 aa7.39□□□□□ -1.23
COPB1-202ENST00000439561 PNKDQ8N490 385 aa7.39□□□□□ -1.23
COPB1-202ENST00000439561 ARRDC1-AS1Q9H2J1 176 aa7.39□□□□□ -1.23
COPB1-202ENST00000439561 CST9LQ9H4G1 147 aa7.39□□□□□ -1.23
COPB1-202ENST00000439561 ZNF430Q9H8G1 570 aaPredicted RBP7.39□□□□□ -1.23
COPB1-202ENST00000439561 MRPL27Q9P0M9 148 aaKnown RBP7.39□□□□□ -1.23
COPB1-202ENST00000439561 SPTA1P02549 2419 aa7.39□□□□□ -1.23
COPB1-202ENST00000439561 TRAV8-1A0A0A6YYK1 113 aa7.39□□□□□ -1.23
COPB1-202ENST00000439561 TRGV8A0A0C4DH27 118 aa7.39□□□□□ -1.23
COPB1-202ENST00000439561 DLL1O00548 723 aa7.39□□□□□ -1.23
COPB1-202ENST00000439561 CCL8P80075 99 aa7.39□□□□□ -1.23
COPB1-202ENST00000439561 SSBP2P81877 361 aaPredicted RBP7.39□□□□□ -1.23
COPB1-202ENST00000439561 RPL24P83731 157 aaKnown RBP7.39□□□□□ -1.23
COPB1-202ENST00000439561 TNFAIP6P98066 277 aaPredicted RBP7.39□□□□□ -1.23
COPB1-202ENST00000439561 PRB3Q04118 309 aaPredicted RBP7.39□□□□□ -1.23
COPB1-202ENST00000439561 CD69Q07108 199 aa7.39□□□□□ -1.23
COPB1-202ENST00000439561 Q6ZT83 130 aa7.39□□□□□ -1.23
COPB1-202ENST00000439561 FOXA2Q9Y261 457 aaPredicted RBP7.39□□□□□ -1.23
COPB1-202ENST00000439561 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.39□□□□□ -1.23
COPB1-202ENST00000439561 IGLC7A0M8Q6 106 aa7.39□□□□□ -1.23
COPB1-202ENST00000439561 SYS1-DBNDD2H3BUS1 97 aa7.39□□□□□ -1.23
COPB1-202ENST00000439561 UPK2O00526 184 aa7.39□□□□□ -1.23
COPB1-202ENST00000439561 SLC25A17O43808 307 aa7.39□□□□□ -1.23
COPB1-202ENST00000439561 HLA-DRB1P01911 266 aa7.39□□□□□ -1.23
COPB1-202ENST00000439561 CT45A6P0DMU7 189 aa7.39□□□□□ -1.23
COPB1-202ENST00000439561 CT45A5P0DMU8 189 aa7.39□□□□□ -1.23
COPB1-202ENST00000439561 CT45A7P0DMV0 189 aa7.39□□□□□ -1.23
COPB1-202ENST00000439561 FXYD7P58549 80 aa7.39□□□□□ -1.23
COPB1-202ENST00000439561 PRCDQ00LT1 54 aa7.39□□□□□ -1.23
COPB1-202ENST00000439561 WFDC3Q8IUB2 231 aa7.39□□□□□ -1.23
COPB1-202ENST00000439561 GCSAMQ8N6F7 178 aa7.39□□□□□ -1.23
COPB1-202ENST00000439561 SH3BGRL2Q9UJC5 107 aa7.39□□□□□ -1.23
COPB1-202ENST00000439561 TRAV30A0A087WSZ9 112 aa7.38□□□□□ -1.23
COPB1-202ENST00000439561 J3QW42 95 aa7.38□□□□□ -1.23
COPB1-202ENST00000439561 ITGB1BP1O14713 200 aa7.38□□□□□ -1.23
COPB1-202ENST00000439561 RBP4P02753 201 aa7.38□□□□□ -1.23
COPB1-202ENST00000439561 NMUP48645 174 aa7.38□□□□□ -1.23
COPB1-202ENST00000439561 EIF4EBP1Q13541 118 aaPredicted RBP7.38□□□□□ -1.23
COPB1-202ENST00000439561 OCIAD2Q56VL3 154 aa7.38□□□□□ -1.23
COPB1-202ENST00000439561 NEUROG1Q92886 237 aa7.38□□□□□ -1.23
COPB1-202ENST00000439561 ZNF503Q96F45 646 aa7.38□□□□□ -1.23
COPB1-202ENST00000439561 MRPL20Q9BYC9 149 aaKnown RBP7.38□□□□□ -1.23
COPB1-202ENST00000439561 MEGF9Q9H1U4 602 aa7.38□□□□□ -1.23
COPB1-202ENST00000439561 RPP21Q9H633 154 aaKnown RBP7.38□□□□□ -1.23
COPB1-202ENST00000439561 HSPB8Q9UJY1 196 aa7.38□□□□□ -1.23
COPB1-202ENST00000439561 F11RQ9Y624 299 aaKnown RBP7.38□□□□□ -1.23
COPB1-202ENST00000439561 NAV3Q8IVL0 2385 aa7.38□□□□□ -1.23
COPB1-202ENST00000439561 KBTBD11-OT1A0A1B0GTJ5 212 aa7.38□□□□□ -1.23
COPB1-202ENST00000439561 PCNX2A6NKB5 2137 aa7.38□□□□□ -1.23
COPB1-202ENST00000439561 FAM90A9PA6NNJ1 464 aa7.38□□□□□ -1.23
COPB1-202ENST00000439561 NBEAP1P0C6P0 100 aa7.38□□□□□ -1.23
COPB1-202ENST00000439561 GDF5OSQ5U4N7 250 aa7.38□□□□□ -1.23
COPB1-202ENST00000439561 GOLT1AQ6ZVE7 132 aa7.38□□□□□ -1.23
COPB1-202ENST00000439561 PRR7Q8TB68 274 aa7.38□□□□□ -1.23
COPB1-202ENST00000439561 SRSF12Q8WXF0 261 aaKnown RBP7.38□□□□□ -1.23
COPB1-202ENST00000439561 PERPQ96FX8 193 aa7.38□□□□□ -1.23
COPB1-202ENST00000439561 ZPBPQ9BS86 351 aa7.38□□□□□ -1.23
COPB1-202ENST00000439561 TMEM14BQ9NUH8 114 aa7.38□□□□□ -1.23
COPB1-202ENST00000439561 LOC105371242A0A075B767 164 aa7.37□□□□□ -1.23
COPB1-202ENST00000439561 IGHV2-70DA0A0C4DH43 119 aa7.37□□□□□ -1.23
COPB1-202ENST00000439561 C7orf71A4D174 169 aa7.37□□□□□ -1.23
COPB1-202ENST00000439561 SRRM4A7MD48 611 aaKnown RBP7.37□□□□□ -1.23
COPB1-202ENST00000439561 APOHP02749 345 aaPredicted RBP7.37□□□□□ -1.23
COPB1-202ENST00000439561 TMPRSS3P57727 454 aa7.37□□□□□ -1.23
COPB1-202ENST00000439561 C1orf229Q6ZS94 237 aaPredicted RBP7.37□□□□□ -1.23
COPB1-202ENST00000439561 C1orf159Q96HA4 380 aa7.37□□□□□ -1.23
COPB1-202ENST00000439561 MRPL32Q9BYC8 188 aaKnown RBP7.37□□□□□ -1.23
COPB1-202ENST00000439561 GAGE12BA1L429 117 aa7.37□□□□□ -1.23
COPB1-202ENST00000439561 SRRM5B3KS81 715 aa7.37□□□□□ -1.23
COPB1-202ENST00000439561 MMP23AO75900 390 aa7.37□□□□□ -1.23
COPB1-202ENST00000439561 LIPFP07098 398 aa7.37□□□□□ -1.23
COPB1-202ENST00000439561 CCL3L1P16619 93 aa7.37□□□□□ -1.23
COPB1-202ENST00000439561 GPR183P32249 361 aa7.37□□□□□ -1.23
COPB1-202ENST00000439561 CDKN1BP46527 198 aa7.37□□□□□ -1.23
COPB1-202ENST00000439561 PSG9Q00887 426 aa7.37□□□□□ -1.23
COPB1-202ENST00000439561 TRIP6Q15654 476 aaKnown RBP7.37□□□□□ -1.23
COPB1-202ENST00000439561 SPRNQ5BIV9 151 aa7.37□□□□□ -1.23
COPB1-202ENST00000439561 ST20Q9HBF5 79 aa7.37□□□□□ -1.23
COPB1-202ENST00000439561 EPDR1Q9UM22 224 aa7.37□□□□□ -1.23
COPB1-202ENST00000439561 CACNA1BQ00975 2339 aa7.37□□□□□ -1.23
COPB1-202ENST00000439561 PRSS46E5RG02 174 aa7.37□□□□□ -1.23
COPB1-202ENST00000439561 H3BUT2 72 aa7.37□□□□□ -1.23
COPB1-202ENST00000439561 CSN1S1P47710 185 aa7.37□□□□□ -1.23
COPB1-202ENST00000439561 BHLHA15Q7RTS1 189 aaPredicted RBP7.37□□□□□ -1.23
COPB1-202ENST00000439561 ZCCHC24Q8N2G6 241 aaKnown RBP7.37□□□□□ -1.23
COPB1-202ENST00000439561 C9orf106Q8NAJ2 232 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms