RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 SUPT4H1P63272 117 aaKnown RBP14.9□□□□□ -0.02
NCKIPSD-206ENST00000439518 SLC24A4Q8NFF2 622 aa14.9□□□□□ -0.02
NCKIPSD-206ENST00000439518 MCFD2Q8NI22 146 aa14.9□□□□□ -0.02
NCKIPSD-206ENST00000439518 GATAD1Q8WUU5 269 aa14.9□□□□□ -0.02
NCKIPSD-206ENST00000439518 SCGB3A2Q96PL1 93 aa14.9□□□□□ -0.02
NCKIPSD-206ENST00000439518 CACFD1Q9UGQ2 172 aa14.9□□□□□ -0.02
NCKIPSD-206ENST00000439518 HYDINQ4G0P3 5121 aa14.9□□□□□ -0.02
NCKIPSD-206ENST00000439518 NUPR2A6NF83 97 aa14.89□□□□□ -0.03
NCKIPSD-206ENST00000439518 NOL3O60936 208 aaKnown RBP14.89□□□□□ -0.03
NCKIPSD-206ENST00000439518 P2RY1P47900 373 aa14.89□□□□□ -0.03
NCKIPSD-206ENST00000439518 RND2P52198 227 aa14.89□□□□□ -0.03
NCKIPSD-206ENST00000439518 LEMD1Q68G75 181 aa14.89□□□□□ -0.03
NCKIPSD-206ENST00000439518 CEMP1Q6PRD7 247 aaPredicted RBP14.89□□□□□ -0.03
NCKIPSD-206ENST00000439518 TMEM217Q8N7C4 229 aa14.89□□□□□ -0.03
NCKIPSD-206ENST00000439518 MCUBQ9NWR8 336 aa14.89□□□□□ -0.03
NCKIPSD-206ENST00000439518 U3KQE9 123 aa14.89□□□□□ -0.03
NCKIPSD-206ENST00000439518 ALMS1Q8TCU4 4167 aa14.89□□□□□ -0.03
NCKIPSD-206ENST00000439518 EPPK1P58107 5090 aaKnown RBP14.89□□□□□ -0.03
NCKIPSD-206ENST00000439518 K7EQG2 157 aa14.88□□□□□ -0.03
NCKIPSD-206ENST00000439518 NPY1RP25929 384 aa14.88□□□□□ -0.03
NCKIPSD-206ENST00000439518 YPEL3P61236 119 aaPredicted RBP14.88□□□□□ -0.03
NCKIPSD-206ENST00000439518 RBMS2Q15434 407 aaKnown RBP14.88□□□□□ -0.03
NCKIPSD-206ENST00000439518 OR1S2Q8NGQ3 325 aa14.88□□□□□ -0.03
NCKIPSD-206ENST00000439518 HSPB7Q9UBY9 170 aa14.88□□□□□ -0.03
NCKIPSD-206ENST00000439518 RABAC1Q9UI14 185 aa14.88□□□□□ -0.03
NCKIPSD-206ENST00000439518 A0A0B4J2A0 478 aa14.87□□□□□ -0.03
NCKIPSD-206ENST00000439518 NXPH3O95157 252 aa14.87□□□□□ -0.03
NCKIPSD-206ENST00000439518 AKR1C4P17516 323 aa14.87□□□□□ -0.03
NCKIPSD-206ENST00000439518 OR10J1P30954 320 aa14.87□□□□□ -0.03
NCKIPSD-206ENST00000439518 CCR6P51684 374 aa14.87□□□□□ -0.03
NCKIPSD-206ENST00000439518 LYZL2Q7Z4W2 148 aa14.87□□□□□ -0.03
NCKIPSD-206ENST00000439518 STXBP6Q8NFX7 210 aa14.87□□□□□ -0.03
NCKIPSD-206ENST00000439518 Q8WTZ3 238 aa14.87□□□□□ -0.03
NCKIPSD-206ENST00000439518 LINC00476Q8WZB0 136 aa14.87□□□□□ -0.03
NCKIPSD-206ENST00000439518 GRAMD2BQ96HH9 432 aa14.87□□□□□ -0.03
NCKIPSD-206ENST00000439518 RARRES2Q99969 163 aa14.87□□□□□ -0.03
NCKIPSD-206ENST00000439518 SHPKQ9UHJ6 478 aa14.87□□□□□ -0.03
NCKIPSD-206ENST00000439518 KLF9Q13886 244 aaPredicted RBP14.86□□□□□ -0.03
NCKIPSD-206ENST00000439518 SMCO1Q147U7 214 aa14.86□□□□□ -0.03
NCKIPSD-206ENST00000439518 ETFRF1Q6IPR1 90 aa14.86□□□□□ -0.03
NCKIPSD-206ENST00000439518 NOXA1Q86UR1 476 aa14.86□□□□□ -0.03
NCKIPSD-206ENST00000439518 DCANP1Q8TF63 244 aa14.86□□□□□ -0.03
NCKIPSD-206ENST00000439518 TRIM63Q969Q1 353 aa14.86□□□□□ -0.03
NCKIPSD-206ENST00000439518 NARS2Q96I59 477 aaKnown RBP14.86□□□□□ -0.03
NCKIPSD-206ENST00000439518 CA1P00915 261 aaPredicted RBP14.85□□□□□ -0.03
NCKIPSD-206ENST00000439518 LGI3Q8N145 548 aa14.85□□□□□ -0.03
NCKIPSD-206ENST00000439518 OR11H2Q8NH07 326 aa14.85□□□□□ -0.03
NCKIPSD-206ENST00000439518 NPIPB3Q92617 1050 aa14.85□□□□□ -0.03
NCKIPSD-206ENST00000439518 IFNA10P01566 189 aa14.84□□□□□ -0.03
NCKIPSD-206ENST00000439518 HNRNPCP07910 306 aaKnown RBP eCLIP14.84□□□□□ -0.03
NCKIPSD-206ENST00000439518 SRPXP78539 464 aa14.84□□□□□ -0.03
NCKIPSD-206ENST00000439518 USF2Q15853 346 aaPredicted RBP14.84□□□□□ -0.03
NCKIPSD-206ENST00000439518 C16orf54Q6UWD8 224 aa14.84□□□□□ -0.03
NCKIPSD-206ENST00000439518 DTD1Q8TEA8 209 aa14.84□□□□□ -0.03
NCKIPSD-206ENST00000439518 GLMPQ8WWB7 406 aa14.84□□□□□ -0.03
NCKIPSD-206ENST00000439518 C11orf68Q9H3H3 251 aaKnown RBP14.84□□□□□ -0.03
NCKIPSD-206ENST00000439518 RBKSQ9H477 322 aa14.84□□□□□ -0.03
NCKIPSD-206ENST00000439518 U3KQ87 197 aa14.84□□□□□ -0.03
NCKIPSD-206ENST00000439518 GIG44P09565 113 aaPredicted RBP14.83□□□□□ -0.04
NCKIPSD-206ENST00000439518 ZNF688P0C7X2 276 aa14.83□□□□□ -0.04
NCKIPSD-206ENST00000439518 ANXA3P12429 323 aa14.83□□□□□ -0.04
NCKIPSD-206ENST00000439518 FAUP35544 74 aaKnown RBP14.83□□□□□ -0.04
NCKIPSD-206ENST00000439518 TRPT1Q86TN4 253 aaKnown RBP14.83□□□□□ -0.04
NCKIPSD-206ENST00000439518 STHQ8IWL8 128 aa14.83□□□□□ -0.04
NCKIPSD-206ENST00000439518 ACY3Q96HD9 319 aa14.83□□□□□ -0.04
NCKIPSD-206ENST00000439518 KLK5Q9Y337 293 aaPredicted RBP14.83□□□□□ -0.04
NCKIPSD-206ENST00000439518 V9GYH0 126 aa14.83□□□□□ -0.04
NCKIPSD-206ENST00000439518 AGRNO00468 2067 aa14.83□□□□□ -0.04
NCKIPSD-206ENST00000439518 HELTA6NFD8 242 aa14.82□□□□□ -0.04
NCKIPSD-206ENST00000439518 IL4P05112 153 aa14.82□□□□□ -0.04
NCKIPSD-206ENST00000439518 RD3LP0DJH9 198 aa14.82□□□□□ -0.04
NCKIPSD-206ENST00000439518 AP3S2P59780 193 aa14.82□□□□□ -0.04
NCKIPSD-206ENST00000439518 PYDC2Q56P42 97 aa14.82□□□□□ -0.04
NCKIPSD-206ENST00000439518 PHLDA1Q8WV24 401 aaPredicted RBP14.82□□□□□ -0.04
NCKIPSD-206ENST00000439518 TOMM40O96008 361 aa14.81□□□□□ -0.04
NCKIPSD-206ENST00000439518 EIF2B2P49770 351 aaKnown RBP14.81□□□□□ -0.04
NCKIPSD-206ENST00000439518 ATP5IP56385 69 aaPredicted RBP14.81□□□□□ -0.04
NCKIPSD-206ENST00000439518 ZNF79Q15937 498 aa14.81□□□□□ -0.04
NCKIPSD-206ENST00000439518 TMEM128Q5BJH2 165 aa14.81□□□□□ -0.04
NCKIPSD-206ENST00000439518 TOMM5Q8N4H5 51 aa14.81□□□□□ -0.04
NCKIPSD-206ENST00000439518 PIGBOS1A0A0B4J2F0 54 aa14.8□□□□□ -0.04
NCKIPSD-206ENST00000439518 DUXBA0A1W2PPF3 345 aa14.8□□□□□ -0.04
NCKIPSD-206ENST00000439518 KNCNA6PVL3 124 aa14.8□□□□□ -0.04
NCKIPSD-206ENST00000439518 PITX3O75364 302 aa14.8□□□□□ -0.04
NCKIPSD-206ENST00000439518 LY6G6CO95867 125 aa14.8□□□□□ -0.04
NCKIPSD-206ENST00000439518 PSG1P11464 419 aa14.8□□□□□ -0.04
NCKIPSD-206ENST00000439518 AP2S1P53680 142 aaPredicted RBP14.8□□□□□ -0.04
NCKIPSD-206ENST00000439518 DHRS2Q13268 280 aa14.8□□□□□ -0.04
NCKIPSD-206ENST00000439518 TMED4Q7Z7H5 227 aa14.8□□□□□ -0.04
NCKIPSD-206ENST00000439518 BUB3O43684 328 aa14.79□□□□□ -0.04
NCKIPSD-206ENST00000439518 TMEM41BQ5BJD5 291 aa14.79□□□□□ -0.04
NCKIPSD-206ENST00000439518 LRTM2Q8N967 370 aa14.79□□□□□ -0.04
NCKIPSD-206ENST00000439518 OR1S1Q8NH92 325 aa14.79□□□□□ -0.04
NCKIPSD-206ENST00000439518 C11orf45Q8TAV5 145 aa14.79□□□□□ -0.04
NCKIPSD-206ENST00000439518 IFNA4P05014 189 aa14.78□□□□□ -0.04
NCKIPSD-206ENST00000439518 SPP1P10451 314 aa14.78□□□□□ -0.04
NCKIPSD-206ENST00000439518 GPX4P36969 197 aaPredicted RBP14.78□□□□□ -0.04
NCKIPSD-206ENST00000439518 NANOS2P60321 138 aaKnown RBP14.78□□□□□ -0.04
NCKIPSD-206ENST00000439518 MORN3Q6PF18 240 aaPredicted RBP14.78□□□□□ -0.04
NCKIPSD-206ENST00000439518 CCDC190Q86UF4 302 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms