RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 NKX6-3A6NJ46 265 aa8.13□□□□□ -1.11
CDC42SE1-202ENST00000439374 LYNX1G3V0Z9 82 aa8.13□□□□□ -1.11
CDC42SE1-202ENST00000439374 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.13□□□□□ -1.11
CDC42SE1-202ENST00000439374 MGST3O14880 152 aa8.13□□□□□ -1.11
CDC42SE1-202ENST00000439374 MMP23AO75900 390 aa8.13□□□□□ -1.11
CDC42SE1-202ENST00000439374 LYNX1P0DP58 116 aa8.13□□□□□ -1.11
CDC42SE1-202ENST00000439374 OPRK1P41145 380 aa8.13□□□□□ -1.11
CDC42SE1-202ENST00000439374 MORN2Q502X0 79 aa8.13□□□□□ -1.11
CDC42SE1-202ENST00000439374 NIT1Q86X76 327 aa8.13□□□□□ -1.11
CDC42SE1-202ENST00000439374 RBMXL3Q8N7X1 1067 aaKnown RBP8.13□□□□□ -1.11
CDC42SE1-202ENST00000439374 OR10X1Q8NGY0 326 aa8.13□□□□□ -1.11
CDC42SE1-202ENST00000439374 GGTLC3B5MD39 225 aa8.13□□□□□ -1.11
CDC42SE1-202ENST00000439374 CHEK1O14757 476 aa8.13□□□□□ -1.11
CDC42SE1-202ENST00000439374 STAG3L2P0CL84 134 aa8.13□□□□□ -1.11
CDC42SE1-202ENST00000439374 STAG3L3P0CL85 134 aa8.13□□□□□ -1.11
CDC42SE1-202ENST00000439374 PAX1P15863 534 aa8.13□□□□□ -1.11
CDC42SE1-202ENST00000439374 DUTP33316 252 aaKnown RBP8.13□□□□□ -1.11
CDC42SE1-202ENST00000439374 SPATA12Q7Z6I5 190 aa8.13□□□□□ -1.11
CDC42SE1-202ENST00000439374 OR1B1Q8NGR6 318 aa8.13□□□□□ -1.11
CDC42SE1-202ENST00000439374 NPVFQ9HCQ7 196 aa8.13□□□□□ -1.11
CDC42SE1-202ENST00000439374 V9GYV3 84 aa8.13□□□□□ -1.11
CDC42SE1-202ENST00000439374 ZNF292O60281 2723 aa8.13□□□□□ -1.11
CDC42SE1-202ENST00000439374 SSBP2P81877 361 aaPredicted RBP8.12□□□□□ -1.11
CDC42SE1-202ENST00000439374 SAPCD1Q5SSQ6 148 aa8.12□□□□□ -1.11
CDC42SE1-202ENST00000439374 DNLZQ5SXM8 178 aa8.12□□□□□ -1.11
CDC42SE1-202ENST00000439374 SFTA2Q6UW10 78 aa8.12□□□□□ -1.11
CDC42SE1-202ENST00000439374 GFRALQ6UXV0 394 aa8.12□□□□□ -1.11
CDC42SE1-202ENST00000439374 IL19Q9UHD0 177 aa8.12□□□□□ -1.11
CDC42SE1-202ENST00000439374 FAM181BA6NEQ2 426 aa8.12□□□□□ -1.11
CDC42SE1-202ENST00000439374 PMS2P5A8MQ11 134 aa8.12□□□□□ -1.11
CDC42SE1-202ENST00000439374 ISLRO14498 428 aa8.12□□□□□ -1.11
CDC42SE1-202ENST00000439374 PRRG2O14669 202 aa8.12□□□□□ -1.11
CDC42SE1-202ENST00000439374 COX7A2P2O60397 106 aa8.12□□□□□ -1.11
CDC42SE1-202ENST00000439374 IGKV3-15P01624 115 aa8.12□□□□□ -1.11
CDC42SE1-202ENST00000439374 PRRX1P54821 245 aa8.12□□□□□ -1.11
CDC42SE1-202ENST00000439374 SELENOTP62341 195 aa8.12□□□□□ -1.11
CDC42SE1-202ENST00000439374 TMEM136Q6ZRR5 245 aa8.12□□□□□ -1.11
CDC42SE1-202ENST00000439374 FAM90A1Q86YD7 464 aa8.12□□□□□ -1.11
CDC42SE1-202ENST00000439374 C18orf32Q8TCD1 76 aa8.12□□□□□ -1.11
CDC42SE1-202ENST00000439374 DEFB104AQ8WTQ1 72 aa8.12□□□□□ -1.11
CDC42SE1-202ENST00000439374 IGFBPL1Q8WX77 278 aa8.12□□□□□ -1.11
CDC42SE1-202ENST00000439374 RNF7Q9UBF6 113 aa8.12□□□□□ -1.11
CDC42SE1-202ENST00000439374 ARHGAP32A7KAX9 2087 aa8.12□□□□□ -1.11
CDC42SE1-202ENST00000439374 IGHV3OR16-8A0A075B7F1 116 aa8.12□□□□□ -1.11
CDC42SE1-202ENST00000439374 SAA2-SAA4A0A096LPE2 208 aa8.12□□□□□ -1.11
CDC42SE1-202ENST00000439374 J3QR06 171 aa8.12□□□□□ -1.11
CDC42SE1-202ENST00000439374 GNG7O60262 68 aa8.12□□□□□ -1.11
CDC42SE1-202ENST00000439374 AMY1AP04745 511 aa8.12□□□□□ -1.11
CDC42SE1-202ENST00000439374 SAA2P0DJI9 122 aaPredicted RBP8.12□□□□□ -1.11
CDC42SE1-202ENST00000439374 FOXE3Q13461 319 aa8.12□□□□□ -1.11
CDC42SE1-202ENST00000439374 SP5Q6BEB4 398 aaPredicted RBP8.12□□□□□ -1.11
CDC42SE1-202ENST00000439374 Q8TCH9 128 aa8.12□□□□□ -1.11
CDC42SE1-202ENST00000439374 DAZAP1Q96EP5 407 aaKnown RBP8.12□□□□□ -1.11
CDC42SE1-202ENST00000439374 COMMD5Q9GZQ3 224 aa8.12□□□□□ -1.11
CDC42SE1-202ENST00000439374 C2CD3Q4AC94 2353 aa8.11□□□□□ -1.11
CDC42SE1-202ENST00000439374 TRGV8A0A0C4DH27 118 aa8.11□□□□□ -1.11
CDC42SE1-202ENST00000439374 IGKV1-16P04430 117 aa8.11□□□□□ -1.11
CDC42SE1-202ENST00000439374 ADH4P08319 380 aa8.11□□□□□ -1.11
CDC42SE1-202ENST00000439374 LINC00869P0C866 280 aa8.11□□□□□ -1.11
CDC42SE1-202ENST00000439374 FCER1GP30273 86 aa8.11□□□□□ -1.11
CDC42SE1-202ENST00000439374 MZT1Q08AG7 82 aa8.11□□□□□ -1.11
CDC42SE1-202ENST00000439374 CST9LQ9H4G1 147 aa8.11□□□□□ -1.11
CDC42SE1-202ENST00000439374 TIMM9Q9Y5J7 89 aa8.11□□□□□ -1.11
CDC42SE1-202ENST00000439374 TET2Q6N021 2002 aaPredicted RBP8.11□□□□□ -1.11
CDC42SE1-202ENST00000439374 H3BUT2 72 aa8.11□□□□□ -1.11
CDC42SE1-202ENST00000439374 PROP1O75360 226 aa8.11□□□□□ -1.11
CDC42SE1-202ENST00000439374 LEPROTL1O95214 131 aa8.11□□□□□ -1.11
CDC42SE1-202ENST00000439374 COX7A1P24310 79 aa8.11□□□□□ -1.11
CDC42SE1-202ENST00000439374 NMUP48645 174 aa8.11□□□□□ -1.11
CDC42SE1-202ENST00000439374 CT45A1Q5HYN5 189 aa8.11□□□□□ -1.11
CDC42SE1-202ENST00000439374 LCNL1Q6ZST4 164 aa8.11□□□□□ -1.11
CDC42SE1-202ENST00000439374 Q71RC1 249 aaPredicted RBP8.11□□□□□ -1.11
CDC42SE1-202ENST00000439374 CT45A3Q8NHU0 189 aa8.11□□□□□ -1.11
CDC42SE1-202ENST00000439374 DKK4Q9UBT3 224 aa8.11□□□□□ -1.11
CDC42SE1-202ENST00000439374 AMMECR1Q9Y4X0 333 aaPredicted RBP8.11□□□□□ -1.11
CDC42SE1-202ENST00000439374 OR51B2Q9Y5P1 312 aa8.11□□□□□ -1.11
CDC42SE1-202ENST00000439374 ASH1LQ9NR48 2969 aaKnown RBP8.11□□□□□ -1.11
CDC42SE1-202ENST00000439374 TRBV6-6A0A0A6YYG2 114 aa8.1□□□□□ -1.11
CDC42SE1-202ENST00000439374 GFRA3O60609 400 aa8.1□□□□□ -1.11
CDC42SE1-202ENST00000439374 YPEL1O60688 119 aa8.1□□□□□ -1.11
CDC42SE1-202ENST00000439374 OR4S2Q8NH73 311 aa8.1□□□□□ -1.11
CDC42SE1-202ENST00000439374 C18orf15Q96N68 181 aa8.1□□□□□ -1.11
CDC42SE1-202ENST00000439374 YPEL2Q96QA6 119 aa8.1□□□□□ -1.11
CDC42SE1-202ENST00000439374 YPEL3P61236 119 aaPredicted RBP8.1□□□□□ -1.11
CDC42SE1-202ENST00000439374 NHLH1Q02575 133 aa8.1□□□□□ -1.11
CDC42SE1-202ENST00000439374 SPACA3Q8IXA5 215 aa8.1□□□□□ -1.11
CDC42SE1-202ENST00000439374 ZBTB34Q8NCN2 500 aa8.1□□□□□ -1.11
CDC42SE1-202ENST00000439374 ABHD17AQ96GS6 310 aa8.1□□□□□ -1.11
CDC42SE1-202ENST00000439374 HARBI1Q96MB7 349 aa8.1□□□□□ -1.11
CDC42SE1-202ENST00000439374 SLC25A15Q9Y619 301 aa8.1□□□□□ -1.11
CDC42SE1-202ENST00000439374 FAM90A27PA6NNH2 459 aa8.1□□□□□ -1.11
CDC42SE1-202ENST00000439374 OR5AL1P0C617 328 aa8.1□□□□□ -1.11
CDC42SE1-202ENST00000439374 HTR1DP28221 377 aa8.1□□□□□ -1.11
CDC42SE1-202ENST00000439374 GAGE1Q13065 139 aa8.1□□□□□ -1.11
CDC42SE1-202ENST00000439374 PLGLAQ15195 96 aa8.1□□□□□ -1.11
CDC42SE1-202ENST00000439374 PRR30Q53SZ7 412 aaPredicted RBP8.1□□□□□ -1.11
CDC42SE1-202ENST00000439374 SEM1Q6ZVN7 128 aa8.1□□□□□ -1.11
CDC42SE1-202ENST00000439374 NPIPB3Q92617 1050 aa8.1□□□□□ -1.11
CDC42SE1-202ENST00000439374 CORO2AQ92828 525 aa8.1□□□□□ -1.11
CDC42SE1-202ENST00000439374 PPP1R14DQ9NXH3 145 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms