RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 KRTAP10-3P60369 221 aa9.8□□□□□ -0.84
SCLT1-202ENST00000439369 YPEL3P61236 119 aaPredicted RBP9.8□□□□□ -0.84
SCLT1-202ENST00000439369 EIF5AP63241 154 aaKnown RBP9.8□□□□□ -0.84
SCLT1-202ENST00000439369 DEFA5Q01523 94 aa9.8□□□□□ -0.84
SCLT1-202ENST00000439369 CLINT1Q14677 625 aa9.8□□□□□ -0.84
SCLT1-202ENST00000439369 LGALSLQ3ZCW2 172 aaPredicted RBP9.8□□□□□ -0.84
SCLT1-202ENST00000439369 KHDC1LQ5JSQ8 128 aa9.8□□□□□ -0.84
SCLT1-202ENST00000439369 TMUB2Q71RG4 321 aa9.8□□□□□ -0.84
SCLT1-202ENST00000439369 ARL6Q9H0F7 186 aa9.8□□□□□ -0.84
SCLT1-202ENST00000439369 KCNIP2Q9NS61 270 aa9.8□□□□□ -0.84
SCLT1-202ENST00000439369 MRPL36Q9P0J6 103 aaKnown RBP9.8□□□□□ -0.84
SCLT1-202ENST00000439369 UBE2L5PA0A1B0GUS4 154 aa9.79□□□□□ -0.84
SCLT1-202ENST00000439369 OR2T8A6NH00 312 aa9.79□□□□□ -0.84
SCLT1-202ENST00000439369 ZFP92A6NM28 416 aa9.79□□□□□ -0.84
SCLT1-202ENST00000439369 NUDT19A8MXV4 375 aa9.79□□□□□ -0.84
SCLT1-202ENST00000439369 GGCTO75223 188 aaKnown RBP9.79□□□□□ -0.84
SCLT1-202ENST00000439369 IGKV1-17P01599 117 aa9.79□□□□□ -0.84
SCLT1-202ENST00000439369 IGHV3-11P01762 117 aa9.79□□□□□ -0.84
SCLT1-202ENST00000439369 IGHV3-48P01763 117 aa9.79□□□□□ -0.84
SCLT1-202ENST00000439369 HSPB1P04792 205 aaKnown RBP9.79□□□□□ -0.84
SCLT1-202ENST00000439369 HNRNPCP07910 306 aaKnown RBP eCLIP9.79□□□□□ -0.84
SCLT1-202ENST00000439369 GPR183P32249 361 aa9.79□□□□□ -0.84
SCLT1-202ENST00000439369 ARL3P36405 182 aa9.79□□□□□ -0.84
SCLT1-202ENST00000439369 RELQ04864 619 aaPredicted RBP9.79□□□□□ -0.84
SCLT1-202ENST00000439369 BTNL8Q6UX41 500 aa9.79□□□□□ -0.84
SCLT1-202ENST00000439369 CLEC19AQ6UXS0 136 aa9.79□□□□□ -0.84
SCLT1-202ENST00000439369 C12orf54Q6X4T0 127 aa9.79□□□□□ -0.84
SCLT1-202ENST00000439369 UBAC2Q8NBM4 344 aa9.79□□□□□ -0.84
SCLT1-202ENST00000439369 KLHL30-AS1Q8NEE0 82 aa9.79□□□□□ -0.84
SCLT1-202ENST00000439369 SCGB1C1Q8TD33 95 aa9.79□□□□□ -0.84
SCLT1-202ENST00000439369 SMIM3Q9BZL3 60 aa9.79□□□□□ -0.84
SCLT1-202ENST00000439369 WDR61Q9GZS3 305 aaKnown RBP9.79□□□□□ -0.84
SCLT1-202ENST00000439369 WFDC1Q9HC57 220 aa9.79□□□□□ -0.84
SCLT1-202ENST00000439369 IGKV1D-37A0A075B6S9 117 aa9.78□□□□□ -0.84
SCLT1-202ENST00000439369 IGKV1OR2-108A0A075B7D4 117 aa9.78□□□□□ -0.84
SCLT1-202ENST00000439369 ADARB2-AS1A8MUL3 147 aa9.78□□□□□ -0.84
SCLT1-202ENST00000439369 ZP3P21754 424 aa9.78□□□□□ -0.84
SCLT1-202ENST00000439369 KRTAP21-3Q3LHN1 58 aa9.78□□□□□ -0.84
SCLT1-202ENST00000439369 LAMTOR1Q6IAA8 161 aa9.78□□□□□ -0.84
SCLT1-202ENST00000439369 SHISA2Q6UWI4 295 aa9.78□□□□□ -0.84
SCLT1-202ENST00000439369 ZNF600Q6ZNG1 722 aa9.78□□□□□ -0.84
SCLT1-202ENST00000439369 CYTL1Q9NRR1 136 aa9.78□□□□□ -0.84
SCLT1-202ENST00000439369 TIMM9Q9Y5J7 89 aa9.78□□□□□ -0.84
SCLT1-202ENST00000439369 S4R3C0 116 aa9.78□□□□□ -0.84
SCLT1-202ENST00000439369 ANKRD34BA5PLL1 514 aa9.77□□□□□ -0.85
SCLT1-202ENST00000439369 C17orf112F2Z3M2 114 aa9.77□□□□□ -0.85
SCLT1-202ENST00000439369 BOLA2-SMG1P6H3BVE0 249 aa9.77□□□□□ -0.85
SCLT1-202ENST00000439369 BMPR1BO00238 502 aa9.77□□□□□ -0.85
SCLT1-202ENST00000439369 TOMM40O96008 361 aa9.77□□□□□ -0.85
SCLT1-202ENST00000439369 IGHV3-23P01764 117 aa9.77□□□□□ -0.85
SCLT1-202ENST00000439369 FGF7P21781 194 aa9.77□□□□□ -0.85
SCLT1-202ENST00000439369 ADMP35318 185 aa9.77□□□□□ -0.85
SCLT1-202ENST00000439369 RPL29P47914 159 aaKnown RBP9.77□□□□□ -0.85
SCLT1-202ENST00000439369 CAMLGP49069 296 aa9.77□□□□□ -0.85
SCLT1-202ENST00000439369 ZNF616Q08AN1 781 aa9.77□□□□□ -0.85
SCLT1-202ENST00000439369 FHL3Q13643 280 aa9.77□□□□□ -0.85
SCLT1-202ENST00000439369 PXDC1Q5TGL8 231 aa9.77□□□□□ -0.85
SCLT1-202ENST00000439369 RPL7L1Q6DKI1 246 aaKnown RBP9.77□□□□□ -0.85
SCLT1-202ENST00000439369 CYP2G1PQ6ZSU1 146 aa9.77□□□□□ -0.85
SCLT1-202ENST00000439369 GPHB5Q86YW7 130 aa9.77□□□□□ -0.85
SCLT1-202ENST00000439369 C3orf56Q8N813 242 aa9.77□□□□□ -0.85
SCLT1-202ENST00000439369 C11orf44Q8N8P7 122 aa9.77□□□□□ -0.85
SCLT1-202ENST00000439369 ZNF709Q8N972 641 aa9.77□□□□□ -0.85
SCLT1-202ENST00000439369 STOML3Q8TAV4 291 aa9.77□□□□□ -0.85
SCLT1-202ENST00000439369 Q8WTZ3 238 aa9.77□□□□□ -0.85
SCLT1-202ENST00000439369 GNPNAT1Q96EK6 184 aaPredicted RBP9.77□□□□□ -0.85
SCLT1-202ENST00000439369 MGST2Q99735 147 aa9.77□□□□□ -0.85
SCLT1-202ENST00000439369 CHRDL1Q9BU40 450 aa9.77□□□□□ -0.85
SCLT1-202ENST00000439369 ARV1Q9H2C2 271 aa9.77□□□□□ -0.85
SCLT1-202ENST00000439369 SLC45A2Q9UMX9 530 aa9.77□□□□□ -0.85
SCLT1-202ENST00000439369 SETD2Q9BYW2 2564 aaPredicted RBP9.77□□□□□ -0.85
SCLT1-202ENST00000439369 LINC01619G3V211 115 aa9.76□□□□□ -0.85
SCLT1-202ENST00000439369 NDUFA4O00483 81 aa9.76□□□□□ -0.85
SCLT1-202ENST00000439369 AGPAT2O15120 278 aa9.76□□□□□ -0.85
SCLT1-202ENST00000439369 OR2C1O95371 312 aa9.76□□□□□ -0.85
SCLT1-202ENST00000439369 RD3LP0DJH9 198 aa9.76□□□□□ -0.85
SCLT1-202ENST00000439369 MYCNOSP40205 109 aa9.76□□□□□ -0.85
SCLT1-202ENST00000439369 OPCMLQ14982 345 aa9.76□□□□□ -0.85
SCLT1-202ENST00000439369 TIGITQ495A1 244 aa9.76□□□□□ -0.85
SCLT1-202ENST00000439369 FAM106AQ4KMX7 169 aa9.76□□□□□ -0.85
SCLT1-202ENST00000439369 SLC51BQ86UW2 128 aa9.76□□□□□ -0.85
SCLT1-202ENST00000439369 BPIFCQ8NFQ6 507 aa9.76□□□□□ -0.85
SCLT1-202ENST00000439369 OR1N2Q8NGR9 330 aa9.76□□□□□ -0.85
SCLT1-202ENST00000439369 DPF1Q92782 380 aa9.76□□□□□ -0.85
SCLT1-202ENST00000439369 OR5B12Q96R08 314 aa9.76□□□□□ -0.85
SCLT1-202ENST00000439369 PSMG3Q9BT73 122 aaPredicted RBP9.76□□□□□ -0.85
SCLT1-202ENST00000439369 GGTLC1Q9BX51 225 aa9.76□□□□□ -0.85
SCLT1-202ENST00000439369 NPCDR1Q9BY65 106 aa9.76□□□□□ -0.85
SCLT1-202ENST00000439369 CUBNO60494 3623 aa9.76□□□□□ -0.85
SCLT1-202ENST00000439369 ZFHX3Q15911 3703 aa9.76□□□□□ -0.85
SCLT1-202ENST00000439369 PPP5D1E7EU14 171 aa9.75□□□□□ -0.85
SCLT1-202ENST00000439369 CCL24O00175 119 aa9.75□□□□□ -0.85
SCLT1-202ENST00000439369 LGALS9O00182 355 aa9.75□□□□□ -0.85
SCLT1-202ENST00000439369 TRBV12-3P01733 135 aa9.75□□□□□ -0.85
SCLT1-202ENST00000439369 TPT1P13693 172 aaKnown RBP9.75□□□□□ -0.85
SCLT1-202ENST00000439369 NKX2-5P52952 324 aaPredicted RBP9.75□□□□□ -0.85
SCLT1-202ENST00000439369 PRR20EP86478 221 aa9.75□□□□□ -0.85
SCLT1-202ENST00000439369 PRR20CP86479 221 aa9.75□□□□□ -0.85
SCLT1-202ENST00000439369 PRR20DP86480 221 aa9.75□□□□□ -0.85
SCLT1-202ENST00000439369 PRR20BP86481 221 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms