RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 OR10J1P30954 320 aa16.05■□□□□ 0.16
CHD3-204ENST00000439235 GPR183P32249 361 aa16.05■□□□□ 0.16
CHD3-204ENST00000439235 KIAA0141Q14154 515 aaPredicted RBP16.05■□□□□ 0.16
CHD3-204ENST00000439235 KHDC1LQ5JSQ8 128 aa16.05■□□□□ 0.16
CHD3-204ENST00000439235 ZNF343Q6P1L6 599 aa16.05■□□□□ 0.16
CHD3-204ENST00000439235 STOML3Q8TAV4 291 aa16.05■□□□□ 0.16
CHD3-204ENST00000439235 WFDC12Q8WWY7 111 aa16.05■□□□□ 0.16
CHD3-204ENST00000439235 KCNIP2Q9NS61 270 aa16.05■□□□□ 0.16
CHD3-204ENST00000439235 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.04■□□□□ 0.16
CHD3-204ENST00000439235 TCRBV4S1A1TA0A5B7 111 aa16.04■□□□□ 0.16
CHD3-204ENST00000439235 C17orf112F2Z3M2 114 aa16.04■□□□□ 0.16
CHD3-204ENST00000439235 F8W735 103 aaPredicted RBP16.04■□□□□ 0.16
CHD3-204ENST00000439235 NUPL2O15504 423 aaKnown RBP16.04■□□□□ 0.16
CHD3-204ENST00000439235 FABP1P07148 127 aa16.04■□□□□ 0.16
CHD3-204ENST00000439235 IGLC1P0CG04 106 aa16.04■□□□□ 0.16
CHD3-204ENST00000439235 TCTEX1D4Q5JR98 221 aa16.04■□□□□ 0.16
CHD3-204ENST00000439235 CLEC19AQ6UXS0 136 aa16.04■□□□□ 0.16
CHD3-204ENST00000439235 ZNF709Q8N972 641 aa16.04■□□□□ 0.16
CHD3-204ENST00000439235 HSD17B11Q8NBQ5 300 aa16.04■□□□□ 0.16
CHD3-204ENST00000439235 TRGV9Q99603 122 aa16.04■□□□□ 0.16
CHD3-204ENST00000439235 OR2T8A6NH00 312 aa16.03■□□□□ 0.16
CHD3-204ENST00000439235 LGALS1P09382 135 aaKnown RBP16.03■□□□□ 0.16
CHD3-204ENST00000439235 CD28P10747 220 aa16.03■□□□□ 0.16
CHD3-204ENST00000439235 CDX1P47902 265 aaPredicted RBP16.03■□□□□ 0.16
CHD3-204ENST00000439235 CAMLGP49069 296 aa16.03■□□□□ 0.16
CHD3-204ENST00000439235 KRTAP24-1Q3LI83 254 aa16.03■□□□□ 0.16
CHD3-204ENST00000439235 SPSB3Q6PJ21 355 aa16.03■□□□□ 0.16
CHD3-204ENST00000439235 GNPNAT1Q96EK6 184 aaPredicted RBP16.03■□□□□ 0.16
CHD3-204ENST00000439235 MGST2Q99735 147 aa16.03■□□□□ 0.16
CHD3-204ENST00000439235 GINS3Q9BRX5 216 aa16.03■□□□□ 0.16
CHD3-204ENST00000439235 NPCDR1Q9BY65 106 aa16.03■□□□□ 0.16
CHD3-204ENST00000439235 ARV1Q9H2C2 271 aa16.03■□□□□ 0.16
CHD3-204ENST00000439235 IGKV1D-37A0A075B6S9 117 aa16.02■□□□□ 0.16
CHD3-204ENST00000439235 IGKV1OR2-108A0A075B7D4 117 aa16.02■□□□□ 0.16
CHD3-204ENST00000439235 AGPAT2O15120 278 aa16.02■□□□□ 0.16
CHD3-204ENST00000439235 TGOLN2O43493 480 aa16.02■□□□□ 0.16
CHD3-204ENST00000439235 CLEC3BP05452 202 aa16.02■□□□□ 0.16
CHD3-204ENST00000439235 SELENOTP62341 195 aa16.02■□□□□ 0.16
CHD3-204ENST00000439235 CYP2G1PQ6ZSU1 146 aa16.02■□□□□ 0.16
CHD3-204ENST00000439235 BAP18Q8IXM2 172 aa16.02■□□□□ 0.16
CHD3-204ENST00000439235 ST8SIA2Q92186 375 aa16.02■□□□□ 0.16
CHD3-204ENST00000439235 GGTLC1Q9BX51 225 aa16.02■□□□□ 0.16
CHD3-204ENST00000439235 GNB4Q9HAV0 340 aa16.02■□□□□ 0.16
CHD3-204ENST00000439235 TIMM9Q9Y5J7 89 aa16.02■□□□□ 0.16
CHD3-204ENST00000439235 TSSC4Q9Y5U2 329 aaPredicted RBP16.02■□□□□ 0.16
CHD3-204ENST00000439235 ATP6V0CP27449 155 aa16.01■□□□□ 0.15
CHD3-204ENST00000439235 ARL3P36405 182 aa16.01■□□□□ 0.15
CHD3-204ENST00000439235 RUNX1Q01196 453 aa16.01■□□□□ 0.15
CHD3-204ENST00000439235 TIGITQ495A1 244 aa16.01■□□□□ 0.15
CHD3-204ENST00000439235 AWAT1Q58HT5 328 aa16.01■□□□□ 0.15
CHD3-204ENST00000439235 C4orf3Q8WVX3 66 aa16.01■□□□□ 0.15
CHD3-204ENST00000439235 OR5B12Q96R08 314 aa16.01■□□□□ 0.15
CHD3-204ENST00000439235 PSMG3Q9BT73 122 aaPredicted RBP16.01■□□□□ 0.15
CHD3-204ENST00000439235 PEF1Q9UBV8 284 aaKnown RBP16.01■□□□□ 0.15
CHD3-204ENST00000439235 ANKRD34BA5PLL1 514 aa16■□□□□ 0.15
CHD3-204ENST00000439235 IGKV1-17P01599 117 aa16■□□□□ 0.15
CHD3-204ENST00000439235 CTSGP08311 255 aa16■□□□□ 0.15
CHD3-204ENST00000439235 YPEL3P61236 119 aaPredicted RBP16■□□□□ 0.15
CHD3-204ENST00000439235 EIF5AL1Q6IS14 154 aaKnown RBP16■□□□□ 0.15
CHD3-204ENST00000439235 C11orf44Q8N8P7 122 aa16■□□□□ 0.15
CHD3-204ENST00000439235 RSG1Q9BU20 258 aa16■□□□□ 0.15
CHD3-204ENST00000439235 C19orf24Q9BVV8 132 aa16■□□□□ 0.15
CHD3-204ENST00000439235 CUBNO60494 3623 aa16■□□□□ 0.15
CHD3-204ENST00000439235 NUDT19A8MXV4 375 aa15.99■□□□□ 0.15
CHD3-204ENST00000439235 RPL29P47914 159 aaKnown RBP15.99■□□□□ 0.15
CHD3-204ENST00000439235 RELQ04864 619 aaPredicted RBP15.99■□□□□ 0.15
CHD3-204ENST00000439235 KLHL30-AS1Q8NEE0 82 aa15.99■□□□□ 0.15
CHD3-204ENST00000439235 TMEM158Q8WZ71 300 aa15.99■□□□□ 0.15
CHD3-204ENST00000439235 CITED2Q99967 270 aaPredicted RBP15.99■□□□□ 0.15
CHD3-204ENST00000439235 SLC45A2Q9UMX9 530 aa15.99■□□□□ 0.15
CHD3-204ENST00000439235 TOMM40O96008 361 aa15.98■□□□□ 0.15
CHD3-204ENST00000439235 CFDP00746 253 aaPredicted RBP15.98■□□□□ 0.15
CHD3-204ENST00000439235 SPP1P10451 314 aa15.98■□□□□ 0.15
CHD3-204ENST00000439235 ADMP35318 185 aa15.98■□□□□ 0.15
CHD3-204ENST00000439235 ZNF90Q03938 601 aa15.98■□□□□ 0.15
CHD3-204ENST00000439235 ZNF616Q08AN1 781 aa15.98■□□□□ 0.15
CHD3-204ENST00000439235 ZNF600Q6ZNG1 722 aa15.98■□□□□ 0.15
CHD3-204ENST00000439235 BPIFCQ8NFQ6 507 aa15.98■□□□□ 0.15
CHD3-204ENST00000439235 Q8WTZ3 238 aa15.98■□□□□ 0.15
CHD3-204ENST00000439235 PHYHIPLQ96FC7 376 aa15.98■□□□□ 0.15
CHD3-204ENST00000439235 CHRDL1Q9BU40 450 aa15.98■□□□□ 0.15
CHD3-204ENST00000439235 SLC25A32Q9H2D1 315 aa15.98■□□□□ 0.15
CHD3-204ENST00000439235 PPP5D1E7EU14 171 aa15.97■□□□□ 0.15
CHD3-204ENST00000439235 I3L521 148 aa15.97■□□□□ 0.15
CHD3-204ENST00000439235 GGCTO75223 188 aaKnown RBP15.97■□□□□ 0.15
CHD3-204ENST00000439235 TSPAN15O95858 294 aa15.97■□□□□ 0.15
CHD3-204ENST00000439235 TRBV12-3P01733 135 aa15.97■□□□□ 0.15
CHD3-204ENST00000439235 SEC11BP0C7V7 166 aa15.97■□□□□ 0.15
CHD3-204ENST00000439235 RD3LP0DJH9 198 aa15.97■□□□□ 0.15
CHD3-204ENST00000439235 B2MP61769 119 aa15.97■□□□□ 0.15
CHD3-204ENST00000439235 MIC13Q5XKP0 118 aa15.97■□□□□ 0.15
CHD3-204ENST00000439235 STPG3Q8N7X2 389 aa15.97■□□□□ 0.15
CHD3-204ENST00000439235 OR2G3Q8NGZ4 309 aa15.97■□□□□ 0.15
CHD3-204ENST00000439235 MDFIQ99750 246 aa15.97■□□□□ 0.15
CHD3-204ENST00000439235 SH3BGRL3Q9H299 93 aa15.97■□□□□ 0.15
CHD3-204ENST00000439235 PXMP4Q9Y6I8 212 aa15.97■□□□□ 0.15
CHD3-204ENST00000439235 BMPR1BO00238 502 aa15.96■□□□□ 0.15
CHD3-204ENST00000439235 HSPB1P04792 205 aaKnown RBP15.96■□□□□ 0.15
CHD3-204ENST00000439235 LINC00869P0C866 280 aa15.96■□□□□ 0.15
CHD3-204ENST00000439235 PSG1P11464 419 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms