RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 PRSS57Q6UWY2 283 aa10.88□□□□□ -0.67
ACTN1-204ENST00000438964 DEFB125Q8N687 156 aa10.88□□□□□ -0.67
ACTN1-204ENST00000438964 CNOT1A5YKK6 2376 aaKnown RBP10.87□□□□□ -0.67
ACTN1-204ENST00000438964 SMIM21Q3B7S5 101 aa10.87□□□□□ -0.67
ACTN1-204ENST00000438964 RNFT1Q5M7Z0 435 aa10.87□□□□□ -0.67
ACTN1-204ENST00000438964 K7EMI3 77 aa10.87□□□□□ -0.67
ACTN1-204ENST00000438964 PEX7O00628 323 aa10.87□□□□□ -0.67
ACTN1-204ENST00000438964 SLC25A5P05141 298 aaKnown RBP10.87□□□□□ -0.67
ACTN1-204ENST00000438964 LOXL3P58215 753 aa10.87□□□□□ -0.67
ACTN1-204ENST00000438964 MRPL49Q13405 166 aaKnown RBP10.87□□□□□ -0.67
ACTN1-204ENST00000438964 OR4S2Q8NH73 311 aa10.87□□□□□ -0.67
ACTN1-204ENST00000438964 MAFAQ8NHW3 353 aaPredicted RBP10.87□□□□□ -0.67
ACTN1-204ENST00000438964 GTSF1Q8WW33 167 aa10.87□□□□□ -0.67
ACTN1-204ENST00000438964 MRPL36Q9P0J6 103 aaKnown RBP10.87□□□□□ -0.67
ACTN1-204ENST00000438964 ABI3Q9P2A4 366 aa10.87□□□□□ -0.67
ACTN1-204ENST00000438964 A0A1W2PRD5 423 aa10.87□□□□□ -0.67
ACTN1-204ENST00000438964 A0A1W2PRF3 423 aa10.87□□□□□ -0.67
ACTN1-204ENST00000438964 A0A1W2PRM7 423 aa10.87□□□□□ -0.67
ACTN1-204ENST00000438964 H3BUT2 72 aa10.87□□□□□ -0.67
ACTN1-204ENST00000438964 MEOX1P50221 254 aa10.87□□□□□ -0.67
ACTN1-204ENST00000438964 RHOGP84095 191 aa10.87□□□□□ -0.67
ACTN1-204ENST00000438964 WFDC3Q8IUB2 231 aa10.87□□□□□ -0.67
ACTN1-204ENST00000438964 FAM167A-AS1Q96KT0 104 aa10.87□□□□□ -0.67
ACTN1-204ENST00000438964 TMUB1Q9BVT8 246 aa10.87□□□□□ -0.67
ACTN1-204ENST00000438964 ZNF576Q9H609 170 aa10.87□□□□□ -0.67
ACTN1-204ENST00000438964 WNK2Q9Y3S1 2297 aa10.86□□□□□ -0.67
ACTN1-204ENST00000438964 COX7A2P2O60397 106 aa10.86□□□□□ -0.67
ACTN1-204ENST00000438964 FAM106CPP0CH98 169 aa10.86□□□□□ -0.67
ACTN1-204ENST00000438964 ARF6P62330 175 aa10.86□□□□□ -0.67
ACTN1-204ENST00000438964 FAM106AQ4KMX7 169 aa10.86□□□□□ -0.67
ACTN1-204ENST00000438964 FLYWCH2Q96CP2 140 aaKnown RBP10.86□□□□□ -0.67
ACTN1-204ENST00000438964 OR2V2Q96R30 315 aa10.86□□□□□ -0.67
ACTN1-204ENST00000438964 JMJD8Q96S16 334 aa10.86□□□□□ -0.67
ACTN1-204ENST00000438964 PAXXQ9BUH6 204 aa10.86□□□□□ -0.67
ACTN1-204ENST00000438964 GAGE10A6NGK3 116 aa10.86□□□□□ -0.67
ACTN1-204ENST00000438964 IQCF6A8MYZ5 107 aa10.86□□□□□ -0.67
ACTN1-204ENST00000438964 TAS2R45P59539 299 aa10.86□□□□□ -0.67
ACTN1-204ENST00000438964 PRB3Q04118 309 aaPredicted RBP10.86□□□□□ -0.67
ACTN1-204ENST00000438964 TMEM177Q53S58 311 aa10.86□□□□□ -0.67
ACTN1-204ENST00000438964 NPIPB3Q92617 1050 aa10.86□□□□□ -0.67
ACTN1-204ENST00000438964 LOC389332A0A1B0GUA5 103 aa10.85□□□□□ -0.67
ACTN1-204ENST00000438964 PGPA6NDG6 321 aa10.85□□□□□ -0.67
ACTN1-204ENST00000438964 K7ESF4 209 aa10.85□□□□□ -0.67
ACTN1-204ENST00000438964 ADH4P08319 380 aa10.85□□□□□ -0.67
ACTN1-204ENST00000438964 TMEM11P17152 192 aa10.85□□□□□ -0.67
ACTN1-204ENST00000438964 RAB30Q15771 203 aa10.85□□□□□ -0.67
ACTN1-204ENST00000438964 PEAR1Q5VY43 1037 aaPredicted RBP10.85□□□□□ -0.67
ACTN1-204ENST00000438964 ZNF329Q86UD4 541 aa10.85□□□□□ -0.67
ACTN1-204ENST00000438964 OR1B1Q8NGR6 318 aa10.85□□□□□ -0.67
ACTN1-204ENST00000438964 GRAMD2BQ96HH9 432 aa10.85□□□□□ -0.67
ACTN1-204ENST00000438964 TMEM14BQ9NUH8 114 aa10.85□□□□□ -0.67
ACTN1-204ENST00000438964 CALYQ9NYX4 217 aa10.85□□□□□ -0.67
ACTN1-204ENST00000438964 MOGAT3Q86VF5 341 aa10.85□□□□□ -0.67
ACTN1-204ENST00000438964 FAM90A1Q86YD7 464 aa10.85□□□□□ -0.67
ACTN1-204ENST00000438964 OR8A1Q8NGG7 326 aa10.85□□□□□ -0.67
ACTN1-204ENST00000438964 SPRR3Q9UBC9 169 aa10.85□□□□□ -0.67
ACTN1-204ENST00000438964 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.84□□□□□ -0.67
ACTN1-204ENST00000438964 GPR183P32249 361 aa10.84□□□□□ -0.67
ACTN1-204ENST00000438964 WDR31Q8NA23 367 aa10.84□□□□□ -0.67
ACTN1-204ENST00000438964 SLC25A10Q9UBX3 287 aaPredicted RBP10.84□□□□□ -0.67
ACTN1-204ENST00000438964 F11RQ9Y624 299 aaKnown RBP10.84□□□□□ -0.67
ACTN1-204ENST00000438964 ASH1LQ9NR48 2969 aaKnown RBP10.84□□□□□ -0.67
ACTN1-204ENST00000438964 K7ERU9 68 aa10.84□□□□□ -0.67
ACTN1-204ENST00000438964 SPRY3O43610 288 aa10.84□□□□□ -0.67
ACTN1-204ENST00000438964 ACP1P24666 158 aa10.84□□□□□ -0.67
ACTN1-204ENST00000438964 PATE2Q6UY27 113 aa10.84□□□□□ -0.67
ACTN1-204ENST00000438964 COMMD5Q9GZQ3 224 aa10.84□□□□□ -0.67
ACTN1-204ENST00000438964 CXXC4Q9H2H0 198 aa10.84□□□□□ -0.67
ACTN1-204ENST00000438964 SCRT2Q9NQ03 307 aa10.84□□□□□ -0.67
ACTN1-204ENST00000438964 ZNF835Q9Y2P0 537 aa10.84□□□□□ -0.67
ACTN1-204ENST00000438964 EP300Q09472 2414 aaPredicted RBP10.84□□□□□ -0.67
ACTN1-204ENST00000438964 TEX50A0A1B0GTY4 177 aa10.84□□□□□ -0.67
ACTN1-204ENST00000438964 CHEK1O14757 476 aa10.84□□□□□ -0.67
ACTN1-204ENST00000438964 HBBP68871 147 aa10.84□□□□□ -0.67
ACTN1-204ENST00000438964 C1orf185Q5T7R7 199 aa10.84□□□□□ -0.67
ACTN1-204ENST00000438964 CIARTQ8N365 385 aaPredicted RBP10.84□□□□□ -0.67
ACTN1-204ENST00000438964 TMEM191AQ9H0A3 160 aa10.84□□□□□ -0.67
ACTN1-204ENST00000438964 ST20Q9HBF5 79 aa10.84□□□□□ -0.67
ACTN1-204ENST00000438964 SPTBN2O15020 2390 aa10.83□□□□□ -0.68
ACTN1-204ENST00000438964 HTR1DP28221 377 aa10.83□□□□□ -0.68
ACTN1-204ENST00000438964 MSMPQ1L6U9 139 aa10.83□□□□□ -0.68
ACTN1-204ENST00000438964 Q5PR19 223 aa10.83□□□□□ -0.68
ACTN1-204ENST00000438964 OR1N2Q8NGR9 330 aa10.83□□□□□ -0.68
ACTN1-204ENST00000438964 DDB2Q92466 427 aa10.83□□□□□ -0.68
ACTN1-204ENST00000438964 PIEZO2Q9H5I5 2752 aa10.83□□□□□ -0.68
ACTN1-204ENST00000438964 TRGV8A0A0C4DH27 118 aa10.83□□□□□ -0.68
ACTN1-204ENST00000438964 GNG7O60262 68 aa10.83□□□□□ -0.68
ACTN1-204ENST00000438964 COX19Q49B96 90 aa10.83□□□□□ -0.68
ACTN1-204ENST00000438964 C10orf113Q5VZT2 155 aa10.83□□□□□ -0.68
ACTN1-204ENST00000438964 VWA1Q6PCB0 445 aa10.83□□□□□ -0.68
ACTN1-204ENST00000438964 LINC00305Q7Z4B0 112 aa10.83□□□□□ -0.68
ACTN1-204ENST00000438964 MAP1LC3CQ9BXW4 147 aa10.83□□□□□ -0.68
ACTN1-204ENST00000438964 SAA1P0DJI8 122 aaPredicted RBP10.82□□□□□ -0.68
ACTN1-204ENST00000438964 LOXL1Q08397 574 aaPredicted RBP10.82□□□□□ -0.68
ACTN1-204ENST00000438964 KLF5Q13887 457 aaPredicted RBP10.82□□□□□ -0.68
ACTN1-204ENST00000438964 HCP5Q6MZN7 132 aa10.82□□□□□ -0.68
ACTN1-204ENST00000438964 C12orf54Q6X4T0 127 aa10.82□□□□□ -0.68
ACTN1-204ENST00000438964 MRPS17Q9Y2R5 130 aaKnown RBP10.82□□□□□ -0.68
ACTN1-204ENST00000438964 LRBAP50851 2863 aa10.82□□□□□ -0.68
ACTN1-204ENST00000438964 HIST1H1EP10412 219 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms