RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 COX7A1P24310 79 aa7.65□□□□□ -1.18
CUX1-206ENST00000437600 GCHFRP30047 84 aa7.65□□□□□ -1.18
CUX1-206ENST00000437600 SUMO1P63165 101 aaKnown RBP7.65□□□□□ -1.18
CUX1-206ENST00000437600 WT1-ASQ06250 92 aa7.65□□□□□ -1.18
CUX1-206ENST00000437600 PMS2P11Q13670 270 aa7.65□□□□□ -1.18
CUX1-206ENST00000437600 FOXA2Q9Y261 457 aaPredicted RBP7.65□□□□□ -1.18
CUX1-206ENST00000437600 B9A039 149 aa7.65□□□□□ -1.19
CUX1-206ENST00000437600 SRSF1Q07955 248 aaKnown RBP eCLIP7.65□□□□□ -1.19
CUX1-206ENST00000437600 OR2T10Q8NGZ9 312 aa7.65□□□□□ -1.19
CUX1-206ENST00000437600 NPIPB3Q92617 1050 aa7.65□□□□□ -1.19
CUX1-206ENST00000437600 FNDC4Q9H6D8 234 aaPredicted RBP7.65□□□□□ -1.19
CUX1-206ENST00000437600 TMEM242Q9NWH2 141 aa7.65□□□□□ -1.19
CUX1-206ENST00000437600 NOTCH2Q04721 2471 aa7.64□□□□□ -1.19
CUX1-206ENST00000437600 TRBV24-1A0A075B6N3 115 aa7.64□□□□□ -1.19
CUX1-206ENST00000437600 TGOLN2O43493 480 aa7.64□□□□□ -1.19
CUX1-206ENST00000437600 SCGB1D1O95968 90 aa7.64□□□□□ -1.19
CUX1-206ENST00000437600 GCGP01275 180 aa7.64□□□□□ -1.19
CUX1-206ENST00000437600 LOXP28300 417 aaPredicted RBP7.64□□□□□ -1.19
CUX1-206ENST00000437600 DIRC2Q96SL1 478 aa7.64□□□□□ -1.19
CUX1-206ENST00000437600 ZNF430Q9H8G1 570 aaPredicted RBP7.64□□□□□ -1.19
CUX1-206ENST00000437600 GRIFINA4D1Z8 144 aa7.64□□□□□ -1.19
CUX1-206ENST00000437600 K7EN84 100 aa7.64□□□□□ -1.19
CUX1-206ENST00000437600 NUPR1O60356 82 aa7.64□□□□□ -1.19
CUX1-206ENST00000437600 CXorf1O96002 111 aa7.64□□□□□ -1.19
CUX1-206ENST00000437600 PYYP10082 97 aa7.64□□□□□ -1.19
CUX1-206ENST00000437600 CDKN1AP38936 164 aa7.64□□□□□ -1.19
CUX1-206ENST00000437600 RPL8P62917 257 aaKnown RBP7.64□□□□□ -1.19
CUX1-206ENST00000437600 PRCDQ00LT1 54 aa7.64□□□□□ -1.19
CUX1-206ENST00000437600 FXYD3Q14802 87 aa7.64□□□□□ -1.19
CUX1-206ENST00000437600 ZNF672Q499Z4 452 aaPredicted RBP7.64□□□□□ -1.19
CUX1-206ENST00000437600 LRRC10Q5BKY1 277 aa7.64□□□□□ -1.19
CUX1-206ENST00000437600 ZNF705AQ6ZN79 300 aaPredicted RBP7.64□□□□□ -1.19
CUX1-206ENST00000437600 KIR3DL3Q8N743 410 aa7.64□□□□□ -1.19
CUX1-206ENST00000437600 ZNF503Q96F45 646 aa7.64□□□□□ -1.19
CUX1-206ENST00000437600 CBY3A6NI87 242 aa7.63□□□□□ -1.19
CUX1-206ENST00000437600 CGB1A6NKQ9 187 aa7.63□□□□□ -1.19
CUX1-206ENST00000437600 M0QZK8 103 aa7.63□□□□□ -1.19
CUX1-206ENST00000437600 CA1P00915 261 aaPredicted RBP7.63□□□□□ -1.19
CUX1-206ENST00000437600 RNASE2P10153 161 aaKnown RBP7.63□□□□□ -1.19
CUX1-206ENST00000437600 TCL1AP56279 114 aa7.63□□□□□ -1.19
CUX1-206ENST00000437600 C11orf42Q8N5U0 333 aa7.63□□□□□ -1.19
CUX1-206ENST00000437600 CLEC5AQ9NY25 188 aa7.63□□□□□ -1.19
CUX1-206ENST00000437600 PRNDQ9UKY0 176 aa7.63□□□□□ -1.19
CUX1-206ENST00000437600 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.63□□□□□ -1.193e-7■■■■■ 26.8
CUX1-206ENST00000437600 TCF21O43680 179 aa7.63□□□□□ -1.19
CUX1-206ENST00000437600 RPLP1P05386 114 aaKnown RBP7.63□□□□□ -1.19
CUX1-206ENST00000437600 IL3RAP26951 378 aa7.63□□□□□ -1.19
CUX1-206ENST00000437600 COL8A1P27658 744 aa7.63□□□□□ -1.19
CUX1-206ENST00000437600 KIR2DS2P43631 304 aa7.63□□□□□ -1.19
CUX1-206ENST00000437600 ERVFC1-1P60608 527 aa7.63□□□□□ -1.19
CUX1-206ENST00000437600 RAB31Q13636 194 aa7.63□□□□□ -1.19
CUX1-206ENST00000437600 IQCJQ1A5X6 159 aa7.63□□□□□ -1.19
CUX1-206ENST00000437600 FBXL19-AS1Q494R0 122 aa7.63□□□□□ -1.19
CUX1-206ENST00000437600 LEMD1Q68G75 181 aa7.63□□□□□ -1.19
CUX1-206ENST00000437600 CORO2AQ92828 525 aa7.63□□□□□ -1.19
CUX1-206ENST00000437600 CTDSP1Q9GZU7 261 aa7.63□□□□□ -1.19
CUX1-206ENST00000437600 RNASE7Q9H1E1 156 aaKnown RBP7.63□□□□□ -1.19
CUX1-206ENST00000437600 S4R3C0 116 aa7.63□□□□□ -1.19
CUX1-206ENST00000437600 TRAV34A0A0B4J273 112 aa7.62□□□□□ -1.19
CUX1-206ENST00000437600 F6UZH7 168 aa7.62□□□□□ -1.19
CUX1-206ENST00000437600 MOSP00540 346 aa7.62□□□□□ -1.19
CUX1-206ENST00000437600 APOA2P02652 100 aa7.62□□□□□ -1.19
CUX1-206ENST00000437600 RHOBP62745 196 aa7.62□□□□□ -1.19
CUX1-206ENST00000437600 PRR20EP86478 221 aa7.62□□□□□ -1.19
CUX1-206ENST00000437600 PRR20CP86479 221 aa7.62□□□□□ -1.19
CUX1-206ENST00000437600 PRR20DP86480 221 aa7.62□□□□□ -1.19
CUX1-206ENST00000437600 PRR20BP86481 221 aa7.62□□□□□ -1.19
CUX1-206ENST00000437600 PRR20AP86496 221 aa7.62□□□□□ -1.19
CUX1-206ENST00000437600 BATFQ16520 125 aa7.62□□□□□ -1.19
CUX1-206ENST00000437600 PQLC2Q6ZP29 291 aa7.62□□□□□ -1.19
CUX1-206ENST00000437600 TMEM256Q8N2U0 113 aa7.62□□□□□ -1.19
CUX1-206ENST00000437600 SFRP2Q96HF1 295 aa7.62□□□□□ -1.19
CUX1-206ENST00000437600 SRD5A3Q9H8P0 318 aa7.62□□□□□ -1.19
CUX1-206ENST00000437600 SLC45A2Q9UMX9 530 aa7.62□□□□□ -1.19
CUX1-206ENST00000437600 NAV2Q8IVL1 2488 aa7.62□□□□□ -1.19
CUX1-206ENST00000437600 FCN1O00602 326 aa7.62□□□□□ -1.19
CUX1-206ENST00000437600 PDE6DO43924 150 aa7.62□□□□□ -1.19
CUX1-206ENST00000437600 MPDU1O75352 247 aa7.62□□□□□ -1.19
CUX1-206ENST00000437600 OR5G3P0C626 314 aa7.62□□□□□ -1.19
CUX1-206ENST00000437600 AREGP15514 252 aa7.62□□□□□ -1.19
CUX1-206ENST00000437600 ORM2P19652 201 aa7.62□□□□□ -1.19
CUX1-206ENST00000437600 ZNF833PQ6ZTB9 187 aa7.62□□□□□ -1.19
CUX1-206ENST00000437600 TMEM18Q96B42 140 aa7.62□□□□□ -1.19
CUX1-206ENST00000437600 NUDT11Q96G61 164 aa7.62□□□□□ -1.19
CUX1-206ENST00000437600 TLN2Q9Y4G6 2542 aa7.62□□□□□ -1.19
CUX1-206ENST00000437600 FAM90A9PA6NNJ1 464 aa7.62□□□□□ -1.19
CUX1-206ENST00000437600 TOX4O94842 621 aa7.62□□□□□ -1.19
CUX1-206ENST00000437600 CBLN1P23435 193 aa7.62□□□□□ -1.19
CUX1-206ENST00000437600 RNF151Q2KHN1 245 aa7.62□□□□□ -1.19
CUX1-206ENST00000437600 OR5AN1Q8NGI8 311 aa7.62□□□□□ -1.19
CUX1-206ENST00000437600 ADTRPQ96IZ2 230 aa7.62□□□□□ -1.19
CUX1-206ENST00000437600 NDUFA4L2Q9NRX3 87 aa7.62□□□□□ -1.19
CUX1-206ENST00000437600 KCNIP2Q9NS61 270 aa7.62□□□□□ -1.19
CUX1-206ENST00000437600 IGHV1-8P0DP01 117 aa7.61□□□□□ -1.19
CUX1-206ENST00000437600 MGST1P10620 155 aaKnown RBP7.61□□□□□ -1.19
CUX1-206ENST00000437600 KIAA1644Q3SXP7 199 aa7.61□□□□□ -1.19
CUX1-206ENST00000437600 TMEM144Q7Z5S9 345 aa7.61□□□□□ -1.19
CUX1-206ENST00000437600 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.61□□□□□ -1.19
CUX1-206ENST00000437600 OR4C13Q8NGP0 309 aa7.61□□□□□ -1.19
CUX1-206ENST00000437600 BLNKQ8WV28 456 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms