RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 IGHV1-24A0A0C4DH33 117 aa6.15□□□□□ -1.42
CPSF6-202ENST00000435070 SH2D2AQ9NP31 389 aa6.15□□□□□ -1.42
CPSF6-202ENST00000435070 A0A0G2JLM5 398 aa6.15□□□□□ -1.43
CPSF6-202ENST00000435070 SPAARA0A1B0GVQ0 90 aa6.15□□□□□ -1.43
CPSF6-202ENST00000435070 CDIPTO14735 213 aa6.15□□□□□ -1.43
CPSF6-202ENST00000435070 MYOD1P15172 320 aa6.15□□□□□ -1.43
CPSF6-202ENST00000435070 Q6ZR03 302 aa6.15□□□□□ -1.43
CPSF6-202ENST00000435070 RPEQ96AT9 228 aa6.15□□□□□ -1.43
CPSF6-202ENST00000435070 GALMQ96C23 342 aa6.15□□□□□ -1.43
CPSF6-202ENST00000435070 DPH3Q96FX2 82 aa6.15□□□□□ -1.43
CPSF6-202ENST00000435070 AAMDCQ9H7C9 122 aa6.15□□□□□ -1.43
CPSF6-202ENST00000435070 TMEM140Q9NV12 185 aa6.15□□□□□ -1.43
CPSF6-202ENST00000435070 F11RQ9Y624 299 aaKnown RBP6.15□□□□□ -1.43
CPSF6-202ENST00000435070 TRAV26-1A0A087WT03 109 aa6.15□□□□□ -1.43
CPSF6-202ENST00000435070 LILRA5A6NI73 299 aa6.15□□□□□ -1.43
CPSF6-202ENST00000435070 PRSS57Q6UWY2 283 aa6.15□□□□□ -1.43
CPSF6-202ENST00000435070 ACP7Q6ZNF0 438 aa6.15□□□□□ -1.43
CPSF6-202ENST00000435070 ZNF645Q8N7E2 425 aa6.15□□□□□ -1.43
CPSF6-202ENST00000435070 NPFFR1Q9GZQ6 430 aa6.15□□□□□ -1.43
CPSF6-202ENST00000435070 RP1L1Q8IWN7 2480 aaPredicted RBP6.15□□□□□ -1.43
CPSF6-202ENST00000435070 ZNF716A6NP11 495 aa6.15□□□□□ -1.43
CPSF6-202ENST00000435070 CYC1P08574 325 aa6.15□□□□□ -1.43
CPSF6-202ENST00000435070 KIR3DS1Q14943 382 aa6.15□□□□□ -1.43
CPSF6-202ENST00000435070 OR10W1Q8NGF6 305 aa6.15□□□□□ -1.43
CPSF6-202ENST00000435070 C11orf52Q96A22 123 aa6.15□□□□□ -1.43
CPSF6-202ENST00000435070 SNRNP40Q96DI7 357 aaKnown RBP6.15□□□□□ -1.43
CPSF6-202ENST00000435070 DCTN5Q9BTE1 182 aa6.15□□□□□ -1.43
CPSF6-202ENST00000435070 SCRT2Q9NQ03 307 aa6.15□□□□□ -1.43
CPSF6-202ENST00000435070 TSSC4Q9Y5U2 329 aaPredicted RBP6.15□□□□□ -1.43
CPSF6-202ENST00000435070 SMIM27A0A1W2PRY6 76 aa6.14□□□□□ -1.43
CPSF6-202ENST00000435070 KLF7O75840 302 aaPredicted RBP6.14□□□□□ -1.43
CPSF6-202ENST00000435070 MC5RP33032 325 aa6.14□□□□□ -1.43
CPSF6-202ENST00000435070 PI4KAP42356 2102 aa6.14□□□□□ -1.43
CPSF6-202ENST00000435070 RAB9AP51151 201 aa6.14□□□□□ -1.43
CPSF6-202ENST00000435070 POM121L2Q96KW2 1035 aa6.14□□□□□ -1.43
CPSF6-202ENST00000435070 SIGMAR1Q99720 223 aa6.14□□□□□ -1.43
CPSF6-202ENST00000435070 CHCHD2Q9Y6H1 151 aaPredicted RBP6.14□□□□□ -1.43
CPSF6-202ENST00000435070 INTS1Q8N201 2190 aaKnown RBP6.14□□□□□ -1.43
CPSF6-202ENST00000435070 TRAV5A0A0B4J249 113 aa6.14□□□□□ -1.43
CPSF6-202ENST00000435070 C12orf77C9JDV5 145 aa6.14□□□□□ -1.43
CPSF6-202ENST00000435070 SLC25A17O43808 307 aa6.14□□□□□ -1.43
CPSF6-202ENST00000435070 IL4P05112 153 aa6.14□□□□□ -1.43
CPSF6-202ENST00000435070 TEPPQ6URK8 271 aa6.14□□□□□ -1.43
CPSF6-202ENST00000435070 FAM214BQ7L5A3 538 aa6.14□□□□□ -1.43
CPSF6-202ENST00000435070 WFDC3Q8IUB2 231 aa6.14□□□□□ -1.43
CPSF6-202ENST00000435070 CHODLQ9H9P2 273 aa6.14□□□□□ -1.43
CPSF6-202ENST00000435070 MOB4Q9Y3A3 225 aa6.14□□□□□ -1.43
CPSF6-202ENST00000435070 IGHV1OR21-1A0A087WYE8 117 aa6.14□□□□□ -1.43
CPSF6-202ENST00000435070 IGLV2-8P01709 118 aa6.14□□□□□ -1.43
CPSF6-202ENST00000435070 NMUP48645 174 aa6.14□□□□□ -1.43
CPSF6-202ENST00000435070 ATP5IP56385 69 aaPredicted RBP6.14□□□□□ -1.43
CPSF6-202ENST00000435070 GNG3P63215 75 aa6.14□□□□□ -1.43
CPSF6-202ENST00000435070 DYNLRB2Q8TF09 96 aa6.14□□□□□ -1.43
CPSF6-202ENST00000435070 C1QTNF5Q9BXJ0 243 aa6.14□□□□□ -1.43
CPSF6-202ENST00000435070 RAB1BQ9H0U4 201 aa6.14□□□□□ -1.43
CPSF6-202ENST00000435070 JKAMPQ9P055 326 aa6.14□□□□□ -1.43
CPSF6-202ENST00000435070 MT-CO3P00414 261 aa6.14□□□□□ -1.43
CPSF6-202ENST00000435070 MLANAQ16655 118 aa6.14□□□□□ -1.43
CPSF6-202ENST00000435070 Q6ZS52 159 aa6.14□□□□□ -1.43
CPSF6-202ENST00000435070 VWC2LB2RUY7 222 aa6.14□□□□□ -1.43
CPSF6-202ENST00000435070 HLA-DRB1P01911 266 aa6.14□□□□□ -1.43
CPSF6-202ENST00000435070 CCR5P51681 352 aa6.14□□□□□ -1.43
CPSF6-202ENST00000435070 VMA21Q3ZAQ7 101 aa6.14□□□□□ -1.43
CPSF6-202ENST00000435070 GUSBP11Q6P575 273 aa6.14□□□□□ -1.43
CPSF6-202ENST00000435070 OR4C13Q8NGP0 309 aa6.14□□□□□ -1.43
CPSF6-202ENST00000435070 PGLYRP4Q96LB8 373 aa6.14□□□□□ -1.43
CPSF6-202ENST00000435070 NABP2Q9BQ15 211 aa6.14□□□□□ -1.43
CPSF6-202ENST00000435070 ROS1P08922 2347 aa6.13□□□□□ -1.43
CPSF6-202ENST00000435070 KMT2EQ8IZD2 1858 aa6.13□□□□□ -1.43
CPSF6-202ENST00000435070 PSPNO60542 156 aa6.13□□□□□ -1.43
CPSF6-202ENST00000435070 MPDU1O75352 247 aa6.13□□□□□ -1.43
CPSF6-202ENST00000435070 FKBP2P26885 142 aaKnown RBP6.13□□□□□ -1.43
CPSF6-202ENST00000435070 DSCR4P56555 118 aaPredicted RBP6.13□□□□□ -1.43
CPSF6-202ENST00000435070 UFSP1Q6NVU6 142 aa6.13□□□□□ -1.43
CPSF6-202ENST00000435070 OR2V2Q96R30 315 aa6.13□□□□□ -1.43
CPSF6-202ENST00000435070 IGKV3-7A0A075B6H7 116 aa6.13□□□□□ -1.43
CPSF6-202ENST00000435070 C9orf118A6NHY6 69 aa6.13□□□□□ -1.43
CPSF6-202ENST00000435070 K7EP34 96 aa6.13□□□□□ -1.43
CPSF6-202ENST00000435070 Q6P435 159 aa6.13□□□□□ -1.43
CPSF6-202ENST00000435070 C2orf91Q6ZV80 131 aa6.13□□□□□ -1.43
CPSF6-202ENST00000435070 FADS6Q8N9I5 356 aa6.13□□□□□ -1.43
CPSF6-202ENST00000435070 STXBP6Q8NFX7 210 aa6.13□□□□□ -1.43
CPSF6-202ENST00000435070 GUCD1Q96NT3 240 aa6.13□□□□□ -1.43
CPSF6-202ENST00000435070 AMMECR1Q9Y4X0 333 aaPredicted RBP6.13□□□□□ -1.43
CPSF6-202ENST00000435070 TRANK1O15050 2925 aa6.13□□□□□ -1.43
CPSF6-202ENST00000435070 TRAV21A0A0B4J279 112 aa6.13□□□□□ -1.43
CPSF6-202ENST00000435070 K7EMI3 77 aa6.13□□□□□ -1.43
CPSF6-202ENST00000435070 PLAUP00749 431 aa6.13□□□□□ -1.43
CPSF6-202ENST00000435070 IGHV3-48P01763 117 aa6.13□□□□□ -1.43
CPSF6-202ENST00000435070 P0C879 139 aa6.13□□□□□ -1.43
CPSF6-202ENST00000435070 FXYD7P58549 80 aa6.13□□□□□ -1.43
CPSF6-202ENST00000435070 HSD52Q0P140 79 aa6.13□□□□□ -1.43
CPSF6-202ENST00000435070 GUSBP1Q15486 140 aa6.13□□□□□ -1.43
CPSF6-202ENST00000435070 FAM120AOSQ5T036 256 aa6.13□□□□□ -1.43
CPSF6-202ENST00000435070 RBPMS2Q6ZRY4 209 aaKnown RBP6.13□□□□□ -1.43
CPSF6-202ENST00000435070 OR8A1Q8NGG7 326 aa6.13□□□□□ -1.43
CPSF6-202ENST00000435070 ZNF503-AS2A6NEH8 195 aa6.13□□□□□ -1.43
CPSF6-202ENST00000435070 WNT9BO14905 357 aa6.13□□□□□ -1.43
CPSF6-202ENST00000435070 WDR82Q6UXN9 313 aa6.13□□□□□ -1.43
CPSF6-202ENST00000435070 ZNF497Q6ZNH5 498 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms