RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 ZNF331Q9NQX6 463 aaPredicted RBP8.36□□□□□ -1.07
CD44-210ENST00000434472 NAT8BQ9UHF3 227 aa8.36□□□□□ -1.07
CD44-210ENST00000434472 A8MWP6 167 aa8.35□□□□□ -1.07
CD44-210ENST00000434472 C22orf46C9J442 243 aa8.35□□□□□ -1.07
CD44-210ENST00000434472 PLAUP00749 431 aa8.35□□□□□ -1.07
CD44-210ENST00000434472 LIPFP07098 398 aa8.35□□□□□ -1.07
CD44-210ENST00000434472 FAM87AP0C7U9 286 aa8.35□□□□□ -1.07
CD44-210ENST00000434472 ORM2P19652 201 aa8.35□□□□□ -1.07
CD44-210ENST00000434472 FXYD3Q14802 87 aa8.35□□□□□ -1.07
CD44-210ENST00000434472 USF2Q15853 346 aaPredicted RBP8.35□□□□□ -1.07
CD44-210ENST00000434472 TMEM183BQ1AE95 376 aa8.35□□□□□ -1.07
CD44-210ENST00000434472 HCP5Q6MZN7 132 aa8.35□□□□□ -1.07
CD44-210ENST00000434472 ST6GALNAC3Q8NDV1 305 aa8.35□□□□□ -1.07
CD44-210ENST00000434472 LY6G5BQ8NDX9 201 aa8.35□□□□□ -1.07
CD44-210ENST00000434472 OR1B1Q8NGR6 318 aa8.35□□□□□ -1.07
CD44-210ENST00000434472 LINC01560Q8TB33 94 aa8.35□□□□□ -1.07
CD44-210ENST00000434472 WIPF2Q8TF74 440 aaPredicted RBP8.35□□□□□ -1.07
CD44-210ENST00000434472 NDUFAF3Q9BU61 184 aa8.35□□□□□ -1.07
CD44-210ENST00000434472 RAB1BQ9H0U4 201 aa8.35□□□□□ -1.07
CD44-210ENST00000434472 MRPL36Q9P0J6 103 aaKnown RBP8.35□□□□□ -1.07
CD44-210ENST00000434472 EPDR1Q9UM22 224 aa8.35□□□□□ -1.07
CD44-210ENST00000434472 MSRB2Q9Y3D2 182 aa8.35□□□□□ -1.07
CD44-210ENST00000434472 MUC3AQ02505 3323 aa8.35□□□□□ -1.07
CD44-210ENST00000434472 PRRC2CQ9Y520 2896 aaKnown RBP8.34□□□□□ -1.07
CD44-210ENST00000434472 GRIFINA4D1Z8 144 aa8.34□□□□□ -1.07
CD44-210ENST00000434472 FAM90A27PA6NNH2 459 aa8.34□□□□□ -1.07
CD44-210ENST00000434472 TEX22C9J3V5 150 aa8.34□□□□□ -1.07
CD44-210ENST00000434472 LY6LH3BQJ8 138 aa8.34□□□□□ -1.07
CD44-210ENST00000434472 SLC25A5P05141 298 aaKnown RBP8.34□□□□□ -1.07
CD44-210ENST00000434472 HIST1H1EP10412 219 aaKnown RBP8.34□□□□□ -1.07
CD44-210ENST00000434472 MBD6Q96DN6 1003 aa8.34□□□□□ -1.07
CD44-210ENST00000434472 TIMD4Q96H15 378 aa8.34□□□□□ -1.07
CD44-210ENST00000434472 RBM14Q96PK6 669 aaKnown RBP8.34□□□□□ -1.07
CD44-210ENST00000434472 KLF12Q9Y4X4 402 aa8.34□□□□□ -1.07
CD44-210ENST00000434472 ICE1Q9Y2F5 2266 aa8.34□□□□□ -1.07
CD44-210ENST00000434472 ZNF705FA8MVS1 300 aaPredicted RBP8.33□□□□□ -1.08
CD44-210ENST00000434472 CCL21O00585 134 aa8.33□□□□□ -1.08
CD44-210ENST00000434472 NUPR1O60356 82 aa8.33□□□□□ -1.08
CD44-210ENST00000434472 SERF1AO75920 110 aa8.33□□□□□ -1.08
CD44-210ENST00000434472 MOSP00540 346 aa8.33□□□□□ -1.08
CD44-210ENST00000434472 IGHV3-48P01763 117 aa8.33□□□□□ -1.08
CD44-210ENST00000434472 NBEAP1P0C6P0 100 aa8.33□□□□□ -1.08
CD44-210ENST00000434472 ZNF705DP0CH99 300 aaPredicted RBP8.33□□□□□ -1.08
CD44-210ENST00000434472 ZNF705BP0CI00 300 aaPredicted RBP8.33□□□□□ -1.08
CD44-210ENST00000434472 COX7A1P24310 79 aa8.33□□□□□ -1.08
CD44-210ENST00000434472 CNTFRP26992 372 aa8.33□□□□□ -1.08
CD44-210ENST00000434472 BRS3P32247 399 aa8.33□□□□□ -1.08
CD44-210ENST00000434472 CEACAM3P40198 252 aa8.33□□□□□ -1.08
CD44-210ENST00000434472 MFAP2P55001 183 aa8.33□□□□□ -1.08
CD44-210ENST00000434472 KLRB1Q12918 225 aa8.33□□□□□ -1.08
CD44-210ENST00000434472 C1orf194Q5T5A4 169 aa8.33□□□□□ -1.08
CD44-210ENST00000434472 TPTE2P1Q5T6R2 138 aa8.33□□□□□ -1.08
CD44-210ENST00000434472 C5orf17Q8NAS9 161 aa8.33□□□□□ -1.08
CD44-210ENST00000434472 FMC1Q96HJ9 113 aa8.33□□□□□ -1.08
CD44-210ENST00000434472 TMEM14CQ9P0S9 112 aa8.33□□□□□ -1.08
CD44-210ENST00000434472 TP53TG3Q9ULZ0 132 aa8.33□□□□□ -1.08
CD44-210ENST00000434472 HIGD1AQ9Y241 93 aa8.33□□□□□ -1.08
CD44-210ENST00000434472 TNCP24821 2201 aa8.33□□□□□ -1.08
CD44-210ENST00000434472 A0A1B0GUS0 222 aa8.32□□□□□ -1.08
CD44-210ENST00000434472 PGPA6NDG6 321 aa8.32□□□□□ -1.08
CD44-210ENST00000434472 LYNX1G3V0Z9 82 aa8.32□□□□□ -1.08
CD44-210ENST00000434472 M0R1W7 72 aa8.32□□□□□ -1.08
CD44-210ENST00000434472 APCSP02743 223 aa8.32□□□□□ -1.08
CD44-210ENST00000434472 LYNX1P0DP58 116 aa8.32□□□□□ -1.08
CD44-210ENST00000434472 TCL1AP56279 114 aa8.32□□□□□ -1.08
CD44-210ENST00000434472 PLGLAQ15195 96 aa8.32□□□□□ -1.08
CD44-210ENST00000434472 SIGLECL1Q8N7X8 197 aa8.32□□□□□ -1.08
CD44-210ENST00000434472 NUDT10Q8NFP7 164 aa8.32□□□□□ -1.08
CD44-210ENST00000434472 NEU4Q8WWR8 484 aaPredicted RBP8.32□□□□□ -1.08
CD44-210ENST00000434472 SRSF12Q8WXF0 261 aaKnown RBP8.32□□□□□ -1.08
CD44-210ENST00000434472 NUDT11Q96G61 164 aa8.32□□□□□ -1.08
CD44-210ENST00000434472 ATG101Q9BSB4 218 aa8.32□□□□□ -1.08
CD44-210ENST00000434472 SAMD10Q9BYL1 202 aa8.32□□□□□ -1.08
CD44-210ENST00000434472 FBXL15Q9H469 300 aa8.32□□□□□ -1.08
CD44-210ENST00000434472 ONECUT1Q9UBC0 465 aa8.32□□□□□ -1.08
CD44-210ENST00000434472 RNF24Q9Y225 148 aa8.32□□□□□ -1.08
CD44-210ENST00000434472 ZGRF1Q86YA3 2104 aa8.32□□□□□ -1.08
CD44-210ENST00000434472 ZNF292O60281 2723 aa8.32□□□□□ -1.08
CD44-210ENST00000434472 TOMM40O96008 361 aa8.32□□□□□ -1.08
CD44-210ENST00000434472 GP9P14770 177 aa8.32□□□□□ -1.08
CD44-210ENST00000434472 HTR1DP28221 377 aa8.32□□□□□ -1.08
CD44-210ENST00000434472 MRPL54Q6P161 138 aaKnown RBP8.32□□□□□ -1.08
CD44-210ENST00000434472 ATP5L2Q7Z4Y8 100 aa8.32□□□□□ -1.08
CD44-210ENST00000434472 S100A7AQ86SG5 101 aa8.32□□□□□ -1.08
CD44-210ENST00000434472 OR11H6Q8NGC7 330 aa8.32□□□□□ -1.08
CD44-210ENST00000434472 TSKUQ8WUA8 353 aa8.32□□□□□ -1.08
CD44-210ENST00000434472 GPR82Q96P67 336 aa8.32□□□□□ -1.08
CD44-210ENST00000434472 HSPB9Q9BQS6 159 aa8.32□□□□□ -1.08
CD44-210ENST00000434472 GNB4Q9HAV0 340 aa8.32□□□□□ -1.08
CD44-210ENST00000434472 ZNF586Q9NXT0 402 aa8.32□□□□□ -1.08
CD44-210ENST00000434472 ZNF492Q9P255 531 aa8.32□□□□□ -1.08
CD44-210ENST00000434472 DPM3Q9P2X0 92 aa8.32□□□□□ -1.08
CD44-210ENST00000434472 FRYQ5TBA9 3013 aa8.31□□□□□ -1.08
CD44-210ENST00000434472 TRAV34A0A0B4J273 112 aa8.31□□□□□ -1.08
CD44-210ENST00000434472 KIR2DL5BA0A0G2JN68 375 aa8.31□□□□□ -1.08
CD44-210ENST00000434472 KIR2DL5BA0A0G2JPC4 375 aa8.31□□□□□ -1.08
CD44-210ENST00000434472 I3L2K1 104 aa8.31□□□□□ -1.08
CD44-210ENST00000434472 SPINK4O60575 86 aa8.31□□□□□ -1.08
CD44-210ENST00000434472 IGLC1P0CG04 106 aa8.31□□□□□ -1.08
CD44-210ENST00000434472 LINC00310P59036 64 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms