RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 ZNF600Q6ZNG1 722 aa11.8□□□□□ -0.52
TREX1-201ENST00000433541 GINS3Q9BRX5 216 aa11.8□□□□□ -0.52
TREX1-201ENST00000433541 PUS1Q9Y606 427 aaKnown RBP eCLIP11.8□□□□□ -0.52
TREX1-201ENST00000433541 TMEM213A2RRL7 107 aa11.79□□□□□ -0.52
TREX1-201ENST00000433541 ZFP92A6NM28 416 aa11.79□□□□□ -0.52
TREX1-201ENST00000433541 SIX6O95475 246 aa11.79□□□□□ -0.52
TREX1-201ENST00000433541 GP9P14770 177 aa11.79□□□□□ -0.52
TREX1-201ENST00000433541 ELLP55199 621 aaPredicted RBP11.79□□□□□ -0.52
TREX1-201ENST00000433541 AKR1C1Q04828 323 aa11.79□□□□□ -0.52
TREX1-201ENST00000433541 GUCA2BQ16661 112 aa11.79□□□□□ -0.52
TREX1-201ENST00000433541 BTNL8Q6UX41 500 aa11.79□□□□□ -0.52
TREX1-201ENST00000433541 OR1S2Q8NGQ3 325 aa11.79□□□□□ -0.52
TREX1-201ENST00000433541 MARC2Q969Z3 335 aa11.79□□□□□ -0.52
TREX1-201ENST00000433541 SMIM8Q96KF7 97 aa11.79□□□□□ -0.52
TREX1-201ENST00000433541 SIGLEC8Q9NYZ4 499 aa11.79□□□□□ -0.52
TREX1-201ENST00000433541 TECRQ9NZ01 308 aaKnown RBP11.79□□□□□ -0.52
TREX1-201ENST00000433541 WI2-2373I1.2A0A1W2PRP0 233 aa11.78□□□□□ -0.52
TREX1-201ENST00000433541 K7EPK0 472 aa11.78□□□□□ -0.52
TREX1-201ENST00000433541 GPX4P36969 197 aaPredicted RBP11.78□□□□□ -0.52
TREX1-201ENST00000433541 CAV2P51636 162 aa11.78□□□□□ -0.52
TREX1-201ENST00000433541 CD300EQ496F6 205 aaPredicted RBP11.78□□□□□ -0.52
TREX1-201ENST00000433541 TMEM116Q8NCL8 245 aa11.78□□□□□ -0.52
TREX1-201ENST00000433541 NARS2Q96I59 477 aaKnown RBP11.78□□□□□ -0.52
TREX1-201ENST00000433541 MRPL27Q9P0M9 148 aaKnown RBP11.78□□□□□ -0.52
TREX1-201ENST00000433541 MGAT4CQ9UBM8 478 aa11.78□□□□□ -0.52
TREX1-201ENST00000433541 IGHV3-49A0A0A0MS15 119 aa11.77□□□□□ -0.53
TREX1-201ENST00000433541 TRAV14DV4A0A0A6YYC5 116 aa11.77□□□□□ -0.53
TREX1-201ENST00000433541 FABP1P07148 127 aa11.77□□□□□ -0.53
TREX1-201ENST00000433541 METTL15P1P0C7V9 234 aa11.77□□□□□ -0.53
TREX1-201ENST00000433541 BMI1P35226 326 aa11.77□□□□□ -0.53
TREX1-201ENST00000433541 RAB32Q13637 225 aa11.77□□□□□ -0.53
TREX1-201ENST00000433541 GAMTQ14353 236 aa11.77□□□□□ -0.53
TREX1-201ENST00000433541 LRRC37A5PQ49AS3 106 aa11.77□□□□□ -0.53
TREX1-201ENST00000433541 TOMM20LQ6UXN7 152 aa11.77□□□□□ -0.53
TREX1-201ENST00000433541 RBPMS2Q6ZRY4 209 aaKnown RBP11.77□□□□□ -0.53
TREX1-201ENST00000433541 GTSCR1Q86UQ5 136 aa11.77□□□□□ -0.53
TREX1-201ENST00000433541 OR2K2Q8NGT1 345 aa11.77□□□□□ -0.53
TREX1-201ENST00000433541 Q8WTZ3 238 aa11.77□□□□□ -0.53
TREX1-201ENST00000433541 ALG5Q9Y673 324 aa11.77□□□□□ -0.53
TREX1-201ENST00000433541 IGHV3OR16-13A0A075B7E8 117 aa11.76□□□□□ -0.53
TREX1-201ENST00000433541 IGHV3-74A0A0B4J1X5 117 aa11.76□□□□□ -0.53
TREX1-201ENST00000433541 C7orf66A4D0T2 115 aa11.76□□□□□ -0.53
TREX1-201ENST00000433541 TSC22D2O75157 780 aa11.76□□□□□ -0.53
TREX1-201ENST00000433541 SCAF4O95104 1147 aaKnown RBP11.76□□□□□ -0.53
TREX1-201ENST00000433541 RLN2P04090 185 aa11.76□□□□□ -0.53
TREX1-201ENST00000433541 IGLC1P0CG04 106 aa11.76□□□□□ -0.53
TREX1-201ENST00000433541 TAS2R30P59541 319 aa11.76□□□□□ -0.53
TREX1-201ENST00000433541 RRAS2P62070 204 aaPredicted RBP11.76□□□□□ -0.53
TREX1-201ENST00000433541 CYCSP99999 105 aaKnown RBP11.76□□□□□ -0.53
TREX1-201ENST00000433541 ACOT7LQ6ZUV0 252 aa11.76□□□□□ -0.53
TREX1-201ENST00000433541 OR10P1Q8NGE3 313 aa11.76□□□□□ -0.53
TREX1-201ENST00000433541 MLXQ9UH92 298 aa11.76□□□□□ -0.53
TREX1-201ENST00000433541 IZUMO1RA6ND01 250 aa11.75□□□□□ -0.53
TREX1-201ENST00000433541 K7EIL1 84 aa11.75□□□□□ -0.53
TREX1-201ENST00000433541 K7EMT4 169 aa11.75□□□□□ -0.53
TREX1-201ENST00000433541 IGKV1-17P01599 117 aa11.75□□□□□ -0.53
TREX1-201ENST00000433541 IL4P05112 153 aa11.75□□□□□ -0.53
TREX1-201ENST00000433541 RD3LP0DJH9 198 aa11.75□□□□□ -0.53
TREX1-201ENST00000433541 NPPCP23582 126 aa11.75□□□□□ -0.53
TREX1-201ENST00000433541 DEFB114Q30KQ6 69 aa11.75□□□□□ -0.53
TREX1-201ENST00000433541 ADAMTSL5Q6ZMM2 481 aa11.75□□□□□ -0.53
TREX1-201ENST00000433541 METTL26Q96S19 204 aa11.75□□□□□ -0.53
TREX1-201ENST00000433541 PBDC1Q9BVG4 233 aa11.75□□□□□ -0.53
TREX1-201ENST00000433541 IGHV7-4-1A0A0J9YVY3 117 aa11.74□□□□□ -0.53
TREX1-201ENST00000433541 CCNKO75909 580 aa11.74□□□□□ -0.53
TREX1-201ENST00000433541 PAX9P55771 341 aa11.74□□□□□ -0.53
TREX1-201ENST00000433541 YPEL3P61236 119 aaPredicted RBP11.74□□□□□ -0.53
TREX1-201ENST00000433541 LAMTOR1Q6IAA8 161 aa11.74□□□□□ -0.53
TREX1-201ENST00000433541 TMEM61Q8N0U2 210 aa11.74□□□□□ -0.53
TREX1-201ENST00000433541 WDR89Q96FK6 387 aaPredicted RBP11.74□□□□□ -0.53
TREX1-201ENST00000433541 RHPN1-AS1Q9BWJ2 59 aa11.74□□□□□ -0.53
TREX1-201ENST00000433541 NMES1Q9C002 83 aa11.74□□□□□ -0.53
TREX1-201ENST00000433541 MED28Q9H204 178 aa11.74□□□□□ -0.53
TREX1-201ENST00000433541 IGHV3-66A0A0C4DH42 116 aa11.73□□□□□ -0.53
TREX1-201ENST00000433541 TOMM40O96008 361 aa11.73□□□□□ -0.53
TREX1-201ENST00000433541 RPL11P62913 178 aaKnown RBP11.73□□□□□ -0.53
TREX1-201ENST00000433541 OR2F1Q13607 317 aa11.73□□□□□ -0.53
TREX1-201ENST00000433541 TMEM14EPQ6UXP3 125 aa11.73□□□□□ -0.53
TREX1-201ENST00000433541 STX12Q86Y82 276 aa11.73□□□□□ -0.53
TREX1-201ENST00000433541 LILRB2Q8N423 598 aa11.73□□□□□ -0.53
TREX1-201ENST00000433541 TMEM231Q9H6L2 316 aa11.73□□□□□ -0.53
TREX1-201ENST00000433541 ZFAND3Q9H8U3 227 aa11.73□□□□□ -0.53
TREX1-201ENST00000433541 SMPXQ9UHP9 88 aa11.73□□□□□ -0.53
TREX1-201ENST00000433541 IGKV3-7A0A075B6H7 116 aa11.72□□□□□ -0.53
TREX1-201ENST00000433541 FAM24AA6NFZ4 105 aa11.72□□□□□ -0.53
TREX1-201ENST00000433541 CST7O76096 145 aa11.72□□□□□ -0.53
TREX1-201ENST00000433541 PET100P0DJ07 73 aa11.72□□□□□ -0.53
TREX1-201ENST00000433541 C8orf88P0DMB2 117 aa11.72□□□□□ -0.53
TREX1-201ENST00000433541 PSG1P11464 419 aa11.72□□□□□ -0.53
TREX1-201ENST00000433541 H2BFSP57053 126 aa11.72□□□□□ -0.53
TREX1-201ENST00000433541 CD81P60033 236 aa11.72□□□□□ -0.53
TREX1-201ENST00000433541 LYZP61626 148 aa11.72□□□□□ -0.53
TREX1-201ENST00000433541 DLK1P80370 383 aa11.72□□□□□ -0.53
TREX1-201ENST00000433541 TMEM217Q8N7C4 229 aa11.72□□□□□ -0.53
TREX1-201ENST00000433541 OR51G1Q8NGK1 321 aa11.72□□□□□ -0.53
TREX1-201ENST00000433541 PPP1R14BQ96C90 147 aa11.72□□□□□ -0.53
TREX1-201ENST00000433541 GRAMD2BQ96HH9 432 aa11.72□□□□□ -0.53
TREX1-201ENST00000433541 SMAD5-AS1Q9Y6J3 95 aa11.72□□□□□ -0.53
TREX1-201ENST00000433541 A0A1W2PS18 150 aa11.71□□□□□ -0.53
TREX1-201ENST00000433541 PRSS46E5RG02 174 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms