RNA–Protein interactions for RNA: ENST00000432877.5

CNOT9-204, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-204ENST00000432877 TRIM16LQ309B1 348 aa12.58□□□□□ -0.4
CNOT9-204ENST00000432877 AARDQ4LEZ3 155 aa12.58□□□□□ -0.4
CNOT9-204ENST00000432877 ETFRF1Q6IPR1 90 aa12.58□□□□□ -0.4
CNOT9-204ENST00000432877 ZNF767PQ75MW2 155 aa12.58□□□□□ -0.4
CNOT9-204ENST00000432877 SNX29P2Q8IUI4 249 aa12.58□□□□□ -0.4
CNOT9-204ENST00000432877 FAM219AQ8IW50 185 aa12.58□□□□□ -0.4
CNOT9-204ENST00000432877 ARRDC1Q8N5I2 433 aa12.58□□□□□ -0.4
CNOT9-204ENST00000432877 CCDC71LQ8N9Z2 235 aa12.58□□□□□ -0.4
CNOT9-204ENST00000432877 ZFAND1Q8TCF1 268 aa12.58□□□□□ -0.4
CNOT9-204ENST00000432877 RNASEH2CQ8TDP1 164 aaKnown RBP12.58□□□□□ -0.4
CNOT9-204ENST00000432877 NRN1Q9NPD7 142 aa12.58□□□□□ -0.4
CNOT9-204ENST00000432877 COPZ2Q9P299 210 aa12.58□□□□□ -0.4
CNOT9-204ENST00000432877 XCL2Q9UBD3 114 aa12.58□□□□□ -0.4
CNOT9-204ENST00000432877 COMMD3Q9UBI1 195 aa12.58□□□□□ -0.4
CNOT9-204ENST00000432877 PKHD1P08F94 4074 aa12.58□□□□□ -0.4
CNOT9-204ENST00000432877 TEX48A0A1B0GUV7 120 aa12.57□□□□□ -0.4
CNOT9-204ENST00000432877 FAM90A26D6RGX4 464 aa12.57□□□□□ -0.4
CNOT9-204ENST00000432877 CD74P04233 296 aa12.57□□□□□ -0.4
CNOT9-204ENST00000432877 IGLC1P0CG04 106 aa12.57□□□□□ -0.4
CNOT9-204ENST00000432877 TBPP20226 339 aa12.57□□□□□ -0.4
CNOT9-204ENST00000432877 UCP1P25874 307 aa12.57□□□□□ -0.4
CNOT9-204ENST00000432877 C2orf83Q53S99 150 aa12.57□□□□□ -0.4
CNOT9-204ENST00000432877 SOHLH1Q5JUK2 328 aa12.57□□□□□ -0.4
CNOT9-204ENST00000432877 PRSS54Q6PEW0 395 aa12.57□□□□□ -0.4
CNOT9-204ENST00000432877 ZNF705AQ6ZN79 300 aaPredicted RBP12.57□□□□□ -0.4
CNOT9-204ENST00000432877 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.57□□□□□ -0.4
CNOT9-204ENST00000432877 M0QYG6 137 aa12.56□□□□□ -0.4
CNOT9-204ENST00000432877 HLA-DRB4P13762 266 aa12.56□□□□□ -0.4
CNOT9-204ENST00000432877 PI3P19957 117 aa12.56□□□□□ -0.4
CNOT9-204ENST00000432877 OR10J1P30954 320 aa12.56□□□□□ -0.4
CNOT9-204ENST00000432877 NKX2-1P43699 371 aaPredicted RBP12.56□□□□□ -0.4
CNOT9-204ENST00000432877 DHODHQ02127 395 aa12.56□□□□□ -0.4
CNOT9-204ENST00000432877 RNF212Q495C1 297 aa12.56□□□□□ -0.4
CNOT9-204ENST00000432877 RNASE10Q5GAN6 216 aaKnown RBP12.56□□□□□ -0.4
CNOT9-204ENST00000432877 NOXA1Q86UR1 476 aa12.56□□□□□ -0.4
CNOT9-204ENST00000432877 RNASE11Q8TAA1 199 aaKnown RBP12.56□□□□□ -0.4
CNOT9-204ENST00000432877 YIPF6Q96EC8 236 aa12.56□□□□□ -0.4
CNOT9-204ENST00000432877 CACFD1Q9UGQ2 172 aa12.56□□□□□ -0.4
CNOT9-204ENST00000432877 HLA-DRB4X5D2U9 266 aa12.56□□□□□ -0.4
CNOT9-204ENST00000432877 ZNF705FA8MVS1 300 aaPredicted RBP12.55□□□□□ -0.4
CNOT9-204ENST00000432877 BUB3O43684 328 aa12.55□□□□□ -0.4
CNOT9-204ENST00000432877 ATP6V1G2O95670 118 aa12.55□□□□□ -0.4
CNOT9-204ENST00000432877 ZNF705DP0CH99 300 aaPredicted RBP12.55□□□□□ -0.4
CNOT9-204ENST00000432877 ZNF705BP0CI00 300 aaPredicted RBP12.55□□□□□ -0.4
CNOT9-204ENST00000432877 LSM3P62310 102 aaKnown RBP12.55□□□□□ -0.4
CNOT9-204ENST00000432877 SIGLEC15Q6ZMC9 328 aa12.55□□□□□ -0.4
CNOT9-204ENST00000432877 Q6ZR54 194 aa12.55□□□□□ -0.4
CNOT9-204ENST00000432877 TERB2Q8NHR7 220 aa12.55□□□□□ -0.4
CNOT9-204ENST00000432877 VCX3AQ9NNX9 186 aa12.55□□□□□ -0.4
CNOT9-204ENST00000432877 HEYLQ9NQ87 328 aaPredicted RBP12.55□□□□□ -0.4
CNOT9-204ENST00000432877 PFDN2Q9UHV9 154 aa12.55□□□□□ -0.4
CNOT9-204ENST00000432877 DNAH11Q96DT5 4516 aa12.54□□□□□ -0.4
CNOT9-204ENST00000432877 CDS2O95674 445 aa12.54□□□□□ -0.4
CNOT9-204ENST00000432877 IL4P05112 153 aa12.54□□□□□ -0.4
CNOT9-204ENST00000432877 RD3LP0DJH9 198 aa12.54□□□□□ -0.4
CNOT9-204ENST00000432877 NUP62P37198 522 aaPredicted RBP12.54□□□□□ -0.4
CNOT9-204ENST00000432877 RND2P52198 227 aa12.54□□□□□ -0.4
CNOT9-204ENST00000432877 OXA1LQ15070 435 aa12.54□□□□□ -0.4
CNOT9-204ENST00000432877 SP6Q3SY56 376 aa12.54□□□□□ -0.4
CNOT9-204ENST00000432877 Q6ZRM9 215 aa12.54□□□□□ -0.4
CNOT9-204ENST00000432877 UBE2DNLQ8IWF7 75 aa12.54□□□□□ -0.4
CNOT9-204ENST00000432877 CLUHP3Q96NS8 147 aa12.54□□□□□ -0.4
CNOT9-204ENST00000432877 RFNGQ9Y644 331 aa12.54□□□□□ -0.4
CNOT9-204ENST00000432877 DYNC1H1Q14204 4646 aaKnown RBP12.54□□□□□ -0.4
CNOT9-204ENST00000432877 AGRNO00468 2067 aa12.53□□□□□ -0.4
CNOT9-204ENST00000432877 TOMM40O96008 361 aa12.53□□□□□ -0.4
CNOT9-204ENST00000432877 ELK1P19419 428 aa12.53□□□□□ -0.4
CNOT9-204ENST00000432877 USF2Q15853 346 aaPredicted RBP12.53□□□□□ -0.4
CNOT9-204ENST00000432877 C15orf40Q8WUR7 153 aa12.53□□□□□ -0.4
CNOT9-204ENST00000432877 ABHD1Q96SE0 405 aa12.53□□□□□ -0.4
CNOT9-204ENST00000432877 SCRT1Q9BWW7 348 aa12.53□□□□□ -0.4
CNOT9-204ENST00000432877 KLK11Q9UBX7 282 aa12.53□□□□□ -0.4
CNOT9-204ENST00000432877 PKD1P98161 4303 aa12.52□□□□□ -0.41
CNOT9-204ENST00000432877 A0A0G2JRQ6 117 aa12.52□□□□□ -0.41
CNOT9-204ENST00000432877 CD3DP04234 171 aa12.52□□□□□ -0.41
CNOT9-204ENST00000432877 ID1P41134 155 aa12.52□□□□□ -0.41
CNOT9-204ENST00000432877 SPATA31B1PQ5VZV4 182 aa12.52□□□□□ -0.41
CNOT9-204ENST00000432877 SLC24A4Q8NFF2 622 aa12.52□□□□□ -0.41
CNOT9-204ENST00000432877 NIPSNAP3BQ9BS92 247 aa12.52□□□□□ -0.41
CNOT9-204ENST00000432877 TMEM222Q9H0R3 208 aa12.52□□□□□ -0.41
CNOT9-204ENST00000432877 DKK2Q9UBU2 259 aa12.52□□□□□ -0.41
CNOT9-204ENST00000432877 MTFP1Q9UDX5 166 aa12.52□□□□□ -0.41
CNOT9-204ENST00000432877 HPGDSO60760 199 aa12.51□□□□□ -0.41
CNOT9-204ENST00000432877 MZT2AQ6P582 158 aa12.51□□□□□ -0.41
CNOT9-204ENST00000432877 FOXI2Q6ZQN5 318 aa12.51□□□□□ -0.41
CNOT9-204ENST00000432877 NPIPB3Q92617 1050 aa12.51□□□□□ -0.41
CNOT9-204ENST00000432877 A0A087WXM4 84 aa12.5□□□□□ -0.41
CNOT9-204ENST00000432877 TEX13DA0A0J9YY54 714 aaPredicted RBP12.5□□□□□ -0.41
CNOT9-204ENST00000432877 CEBPZOSA8MTT3 80 aa12.5□□□□□ -0.41
CNOT9-204ENST00000432877 RORCP51449 518 aa12.5□□□□□ -0.41
CNOT9-204ENST00000432877 EMP1P54849 157 aa12.5□□□□□ -0.41
CNOT9-204ENST00000432877 FAM3BP58499 235 aaPredicted RBP12.5□□□□□ -0.41
CNOT9-204ENST00000432877 C1orf134Q5TEV5 83 aa12.5□□□□□ -0.41
CNOT9-204ENST00000432877 OR13C8Q8NGS7 320 aa12.5□□□□□ -0.41
CNOT9-204ENST00000432877 RBPMSQ93062 196 aaKnown RBP12.5□□□□□ -0.41
CNOT9-204ENST00000432877 SAV1Q9H4B6 383 aaPredicted RBP12.5□□□□□ -0.41
CNOT9-204ENST00000432877 IGLV2-18A0A075B6J9 118 aa12.49□□□□□ -0.41
CNOT9-204ENST00000432877 FAM25AB3EWG3 89 aa12.49□□□□□ -0.41
CNOT9-204ENST00000432877 FAM25CB3EWG5 89 aa12.49□□□□□ -0.41
CNOT9-204ENST00000432877 FAM25GB3EWG6 89 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms