RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 NDUFA6P56556 154 aa10.25□□□□□ -0.77
DDX56-204ENST00000431640 FAM3BP58499 235 aaPredicted RBP10.25□□□□□ -0.77
DDX56-204ENST00000431640 HCP5Q6MZN7 132 aa10.25□□□□□ -0.77
DDX56-204ENST00000431640 NPBQ8NG41 125 aa10.25□□□□□ -0.77
DDX56-204ENST00000431640 OR5T1Q8NG75 326 aa10.25□□□□□ -0.77
DDX56-204ENST00000431640 SFRP2Q96HF1 295 aa10.25□□□□□ -0.77
DDX56-204ENST00000431640 CCL19Q99731 98 aa10.25□□□□□ -0.77
DDX56-204ENST00000431640 FBXL15Q9H469 300 aa10.25□□□□□ -0.77
DDX56-204ENST00000431640 ASH1LQ9NR48 2969 aaKnown RBP10.25□□□□□ -0.77
DDX56-204ENST00000431640 TNFRSF19Q9NS68 423 aa10.25□□□□□ -0.77
DDX56-204ENST00000431640 HECTD1Q9ULT8 2610 aa10.24□□□□□ -0.77
DDX56-204ENST00000431640 POLQO75417 2590 aa10.24□□□□□ -0.77
DDX56-204ENST00000431640 ABCA12Q86UK0 2595 aa10.24□□□□□ -0.77
DDX56-204ENST00000431640 MALRD1Q5VYJ5 2156 aa10.24□□□□□ -0.77
DDX56-204ENST00000431640 IGKV1D-37A0A075B6S9 117 aa10.24□□□□□ -0.77
DDX56-204ENST00000431640 TEX22C9J3V5 150 aa10.24□□□□□ -0.77
DDX56-204ENST00000431640 HIST1H2BKO60814 126 aa10.24□□□□□ -0.77
DDX56-204ENST00000431640 CNIH1O95406 144 aa10.24□□□□□ -0.77
DDX56-204ENST00000431640 IGHV4-39P01824 125 aa10.24□□□□□ -0.77
DDX56-204ENST00000431640 TYMSP04818 313 aa10.24□□□□□ -0.77
DDX56-204ENST00000431640 REG1AP05451 166 aa10.24□□□□□ -0.77
DDX56-204ENST00000431640 HIST1H2BJP06899 126 aa10.24□□□□□ -0.77
DDX56-204ENST00000431640 HIST1H2BOP23527 126 aa10.24□□□□□ -0.77
DDX56-204ENST00000431640 HIST1H2BBP33778 126 aa10.24□□□□□ -0.77
DDX56-204ENST00000431640 CDX1P47902 265 aaPredicted RBP10.24□□□□□ -0.77
DDX56-204ENST00000431640 HIST1H2BDP58876 126 aa10.24□□□□□ -0.77
DDX56-204ENST00000431640 HIST1H2BCP62807 126 aa10.24□□□□□ -0.77
DDX56-204ENST00000431640 HIST2H2BEQ16778 126 aa10.24□□□□□ -0.77
DDX56-204ENST00000431640 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.24□□□□□ -0.77
DDX56-204ENST00000431640 MINOS1Q5TGZ0 78 aa10.24□□□□□ -0.77
DDX56-204ENST00000431640 NECAP1Q8NC96 275 aa10.24□□□□□ -0.77
DDX56-204ENST00000431640 OCC1Q8TAD7 63 aa10.24□□□□□ -0.77
DDX56-204ENST00000431640 SRSF12Q8WXF0 261 aaKnown RBP10.24□□□□□ -0.77
DDX56-204ENST00000431640 HIST1H2BHQ93079 126 aa10.24□□□□□ -0.77
DDX56-204ENST00000431640 ZNF503Q96F45 646 aa10.24□□□□□ -0.77
DDX56-204ENST00000431640 C12orf57Q99622 126 aa10.24□□□□□ -0.77
DDX56-204ENST00000431640 HIST1H2BNQ99877 126 aa10.24□□□□□ -0.77
DDX56-204ENST00000431640 HIST1H2BMQ99879 126 aa10.24□□□□□ -0.77
DDX56-204ENST00000431640 DERL1Q9BUN8 251 aa10.24□□□□□ -0.77
DDX56-204ENST00000431640 MINOS1-NBL1R4GNA1 71 aa10.24□□□□□ -0.77
DDX56-204ENST00000431640 UNC79Q9P2D8 2635 aa10.24□□□□□ -0.77
DDX56-204ENST00000431640 NBR2O15453 112 aa10.23□□□□□ -0.77
DDX56-204ENST00000431640 TRGC1P0CF51 173 aa10.23□□□□□ -0.77
DDX56-204ENST00000431640 SMIM6P0DI80 62 aa10.23□□□□□ -0.77
DDX56-204ENST00000431640 ZNF90Q03938 601 aa10.23□□□□□ -0.77
DDX56-204ENST00000431640 OR10G8Q8NGN5 311 aa10.23□□□□□ -0.77
DDX56-204ENST00000431640 CFHR4Q92496 578 aa10.23□□□□□ -0.77
DDX56-204ENST00000431640 PERPQ96FX8 193 aa10.23□□□□□ -0.77
DDX56-204ENST00000431640 FAM167A-AS1Q96KT0 104 aa10.23□□□□□ -0.77
DDX56-204ENST00000431640 SLC25A2Q9BXI2 301 aa10.23□□□□□ -0.77
DDX56-204ENST00000431640 OR51M1Q9H341 326 aa10.23□□□□□ -0.77
DDX56-204ENST00000431640 PDZD2O15018 2839 aa10.23□□□□□ -0.77
DDX56-204ENST00000431640 TRAV9-1A0A075B6T8 112 aa10.22□□□□□ -0.77
DDX56-204ENST00000431640 NDUFA3O95167 84 aa10.22□□□□□ -0.77
DDX56-204ENST00000431640 MFAP2P55001 183 aa10.22□□□□□ -0.77
DDX56-204ENST00000431640 LGALS4P56470 323 aa10.22□□□□□ -0.77
DDX56-204ENST00000431640 SUMO1P63165 101 aaKnown RBP10.22□□□□□ -0.77
DDX56-204ENST00000431640 PRB3Q04118 309 aaPredicted RBP10.22□□□□□ -0.77
DDX56-204ENST00000431640 MMDQ15546 238 aa10.22□□□□□ -0.77
DDX56-204ENST00000431640 PATE2Q6UY27 113 aa10.22□□□□□ -0.77
DDX56-204ENST00000431640 OR5AU1Q8NGC0 362 aa10.22□□□□□ -0.77
DDX56-204ENST00000431640 FRZBQ92765 325 aa10.22□□□□□ -0.77
DDX56-204ENST00000431640 PAXXQ9BUH6 204 aa10.22□□□□□ -0.77
DDX56-204ENST00000431640 HILPDAQ9Y5L2 63 aa10.22□□□□□ -0.77
DDX56-204ENST00000431640 TRBV20OR9-2A0A075B6H5 130 aa10.22□□□□□ -0.77
DDX56-204ENST00000431640 A0A1W2PPQ1 181 aa10.22□□□□□ -0.77
DDX56-204ENST00000431640 FABP1P07148 127 aa10.22□□□□□ -0.77
DDX56-204ENST00000431640 CRYBB3P26998 211 aa10.22□□□□□ -0.77
DDX56-204ENST00000431640 GNG4P50150 75 aa10.22□□□□□ -0.77
DDX56-204ENST00000431640 TAS2R60P59551 318 aa10.22□□□□□ -0.77
DDX56-204ENST00000431640 PLP1P60201 277 aa10.22□□□□□ -0.77
DDX56-204ENST00000431640 UBE2L3P68036 154 aaKnown RBP10.22□□□□□ -0.77
DDX56-204ENST00000431640 SSBP2P81877 361 aaPredicted RBP10.22□□□□□ -0.77
DDX56-204ENST00000431640 TEX38Q6PEX7 206 aa10.22□□□□□ -0.77
DDX56-204ENST00000431640 EAF1Q96JC9 268 aaPredicted RBP10.22□□□□□ -0.77
DDX56-204ENST00000431640 ZNF355PQ9NSJ1 428 aa10.22□□□□□ -0.77
DDX56-204ENST00000431640 FCN1O00602 326 aa10.21□□□□□ -0.78
DDX56-204ENST00000431640 PHOX2AO14813 284 aa10.21□□□□□ -0.78
DDX56-204ENST00000431640 HYPMO75409 117 aa10.21□□□□□ -0.78
DDX56-204ENST00000431640 OR10J4P0C629 311 aa10.21□□□□□ -0.78
DDX56-204ENST00000431640 RPL19P84098 196 aaKnown RBP10.21□□□□□ -0.78
DDX56-204ENST00000431640 TIGITQ495A1 244 aa10.21□□□□□ -0.78
DDX56-204ENST00000431640 LDLRAD2Q5SZI1 272 aa10.21□□□□□ -0.78
DDX56-204ENST00000431640 LINC00305Q7Z4B0 112 aa10.21□□□□□ -0.78
DDX56-204ENST00000431640 VMO1Q7Z5L0 202 aa10.21□□□□□ -0.78
DDX56-204ENST00000431640 WNT10AQ9GZT5 417 aa10.21□□□□□ -0.78
DDX56-204ENST00000431640 MRPL36Q9P0J6 103 aaKnown RBP10.21□□□□□ -0.78
DDX56-204ENST00000431640 PITPNC1Q9UKF7 332 aa10.21□□□□□ -0.78
DDX56-204ENST00000431640 TBL2Q9Y4P3 447 aaKnown RBP10.21□□□□□ -0.78
DDX56-204ENST00000431640 TRAV5A0A0B4J249 113 aa10.2□□□□□ -0.78
DDX56-204ENST00000431640 IGHV3-48P01763 117 aa10.2□□□□□ -0.78
DDX56-204ENST00000431640 S100A2P29034 98 aa10.2□□□□□ -0.78
DDX56-204ENST00000431640 EBI3Q14213 229 aa10.2□□□□□ -0.78
DDX56-204ENST00000431640 SGMS2Q8NHU3 365 aa10.2□□□□□ -0.78
DDX56-204ENST00000431640 ELOVL1Q9BW60 279 aa10.2□□□□□ -0.78
DDX56-204ENST00000431640 AURKAIP1Q9NWT8 199 aaPredicted RBP10.2□□□□□ -0.78
DDX56-204ENST00000431640 SPG11Q96JI7 2443 aa10.2□□□□□ -0.78
DDX56-204ENST00000431640 A0A0U1RQK1 487 aa10.19□□□□□ -0.78
DDX56-204ENST00000431640 ZNF320A2RRD8 509 aa10.19□□□□□ -0.78
DDX56-204ENST00000431640 PGPEP1LA6NFU8 196 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms