RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 TAS2R43P59537 309 aa2.47□□□□□ -2.01
PTPN4-204ENST00000431283 TPBGQ13641 420 aa2.47□□□□□ -2.01
PTPN4-204ENST00000431283 HMGN3Q15651 99 aa2.47□□□□□ -2.01
PTPN4-204ENST00000431283 RTL8BQ17RB0 113 aa2.47□□□□□ -2.01
PTPN4-204ENST00000431283 DEFB114Q30KQ6 69 aa2.47□□□□□ -2.01
PTPN4-204ENST00000431283 VMA21Q3ZAQ7 101 aa2.47□□□□□ -2.01
PTPN4-204ENST00000431283 Q499Y3 187 aa2.47□□□□□ -2.01
PTPN4-204ENST00000431283 TTC23Q5W5X9 447 aa2.47□□□□□ -2.01
PTPN4-204ENST00000431283 GLT8D1Q68CQ7 371 aa2.47□□□□□ -2.01
PTPN4-204ENST00000431283 LINC00322Q6ZN03 302 aaPredicted RBP2.47□□□□□ -2.01
PTPN4-204ENST00000431283 FAM223AQ8IWN6 122 aa2.47□□□□□ -2.01
PTPN4-204ENST00000431283 C10orf67Q8IYJ2 551 aa2.47□□□□□ -2.01
PTPN4-204ENST00000431283 SLC38A6Q8IZM9 456 aa2.47□□□□□ -2.01
PTPN4-204ENST00000431283 RNF182Q8N6D2 247 aa2.47□□□□□ -2.01
PTPN4-204ENST00000431283 DRAXINQ8NBI3 349 aaPredicted RBP2.47□□□□□ -2.01
PTPN4-204ENST00000431283 NECAP1Q8NC96 275 aa2.47□□□□□ -2.01
PTPN4-204ENST00000431283 OR52B4Q8NGK2 314 aa2.47□□□□□ -2.01
PTPN4-204ENST00000431283 OR52I1Q8NGK6 324 aa2.47□□□□□ -2.01
PTPN4-204ENST00000431283 KCNG3Q8TAE7 436 aa2.47□□□□□ -2.01
PTPN4-204ENST00000431283 MRPL30Q8TCC3 161 aaKnown RBP2.47□□□□□ -2.01
PTPN4-204ENST00000431283 DEDD2Q8WXF8 326 aa2.47□□□□□ -2.01
PTPN4-204ENST00000431283 ABHD14BQ96IU4 210 aa2.47□□□□□ -2.01
PTPN4-204ENST00000431283 SLC29A1Q99808 456 aa2.47□□□□□ -2.01
PTPN4-204ENST00000431283 FAAP24Q9BTP7 215 aa2.47□□□□□ -2.01
PTPN4-204ENST00000431283 GGTLC1Q9BX51 225 aa2.47□□□□□ -2.01
PTPN4-204ENST00000431283 SLC35D1Q9NTN3 355 aa2.47□□□□□ -2.01
PTPN4-204ENST00000431283 PLEKHJ1Q9NW61 149 aa2.47□□□□□ -2.01
PTPN4-204ENST00000431283 KMT2AQ03164 3969 aa2.47□□□□□ -2.01
PTPN4-204ENST00000431283 ALMS1Q8TCU4 4167 aa2.46□□□□□ -2.01
PTPN4-204ENST00000431283 TNCP24821 2201 aa2.46□□□□□ -2.01
PTPN4-204ENST00000431283 FRAS1Q86XX4 4008 aa2.46□□□□□ -2.02
PTPN4-204ENST00000431283 TRAV8-7A0A075B6U6 113 aa2.46□□□□□ -2.02
PTPN4-204ENST00000431283 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.46□□□□□ -2.02
PTPN4-204ENST00000431283 ZNF320A2RRD8 509 aa2.46□□□□□ -2.02
PTPN4-204ENST00000431283 IZUMO1RA6ND01 250 aa2.46□□□□□ -2.02
PTPN4-204ENST00000431283 C2orf70A6NJV1 201 aa2.46□□□□□ -2.02
PTPN4-204ENST00000431283 M0R1X1 148 aa2.46□□□□□ -2.02
PTPN4-204ENST00000431283 LGALS9O00182 355 aa2.46□□□□□ -2.02
PTPN4-204ENST00000431283 DYNC1I1O14576 645 aa2.46□□□□□ -2.02
PTPN4-204ENST00000431283 GGCTO75223 188 aaKnown RBP2.46□□□□□ -2.02
PTPN4-204ENST00000431283 ATP5HO75947 161 aa2.46□□□□□ -2.02
PTPN4-204ENST00000431283 DHFRP00374 187 aa2.46□□□□□ -2.02
PTPN4-204ENST00000431283 TRBV12-3P01733 135 aa2.46□□□□□ -2.02
PTPN4-204ENST00000431283 IFNA4P05014 189 aa2.46□□□□□ -2.02
PTPN4-204ENST00000431283 LIMS3P0CW19 117 aa2.46□□□□□ -2.02
PTPN4-204ENST00000431283 LIMS4P0CW20 117 aa2.46□□□□□ -2.02
PTPN4-204ENST00000431283 AREGP15514 252 aa2.46□□□□□ -2.02
PTPN4-204ENST00000431283 SERPINB10P48595 397 aa2.46□□□□□ -2.02
PTPN4-204ENST00000431283 ETV1P50549 477 aa2.46□□□□□ -2.02
PTPN4-204ENST00000431283 RND3P61587 244 aa2.46□□□□□ -2.02
PTPN4-204ENST00000431283 MRPS15P82914 257 aaKnown RBP2.46□□□□□ -2.02
PTPN4-204ENST00000431283 RHOGP84095 191 aa2.46□□□□□ -2.02
PTPN4-204ENST00000431283 TNFRSF9Q07011 255 aa2.46□□□□□ -2.02
PTPN4-204ENST00000431283 PJVKQ0ZLH3 352 aa2.46□□□□□ -2.02
PTPN4-204ENST00000431283 ARFRP1Q13795 201 aa2.46□□□□□ -2.02
PTPN4-204ENST00000431283 EXOSC2Q13868 293 aaKnown RBP2.46□□□□□ -2.02
PTPN4-204ENST00000431283 TNXAQ16473 311 aa2.46□□□□□ -2.02
PTPN4-204ENST00000431283 AARDQ4LEZ3 155 aa2.46□□□□□ -2.02
PTPN4-204ENST00000431283 OR2G6Q5TZ20 316 aa2.46□□□□□ -2.02
PTPN4-204ENST00000431283 LGALS9CQ6DKI2 356 aa2.46□□□□□ -2.02
PTPN4-204ENST00000431283 C6orf201Q7Z4U5 140 aa2.46□□□□□ -2.02
PTPN4-204ENST00000431283 LYG2Q86SG7 212 aa2.46□□□□□ -2.02
PTPN4-204ENST00000431283 GPHB5Q86YW7 130 aa2.46□□□□□ -2.02
PTPN4-204ENST00000431283 CBR4Q8N4T8 237 aa2.46□□□□□ -2.02
PTPN4-204ENST00000431283 RPP25LQ8N5L8 163 aaKnown RBP2.46□□□□□ -2.02
PTPN4-204ENST00000431283 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.46□□□□□ -2.02
PTPN4-204ENST00000431283 ZNF555Q8NEP9 628 aa2.46□□□□□ -2.02
PTPN4-204ENST00000431283 OR51G1Q8NGK1 321 aa2.46□□□□□ -2.02
PTPN4-204ENST00000431283 OR10J5Q8NHC4 309 aa2.46□□□□□ -2.02
PTPN4-204ENST00000431283 ACOT12Q8WYK0 555 aa2.46□□□□□ -2.02
PTPN4-204ENST00000431283 PTX4Q96A99 478 aa2.46□□□□□ -2.02
PTPN4-204ENST00000431283 SPIN2AQ99865 258 aa2.46□□□□□ -2.02
PTPN4-204ENST00000431283 SPIN2BQ9BPZ2 258 aa2.46□□□□□ -2.02
PTPN4-204ENST00000431283 AGMATQ9BSE5 352 aa2.46□□□□□ -2.02
PTPN4-204ENST00000431283 DCUN1D5Q9BTE7 237 aa2.46□□□□□ -2.02
PTPN4-204ENST00000431283 C9orf16Q9BUW7 83 aa2.46□□□□□ -2.02
PTPN4-204ENST00000431283 TMEM59Q9BXS4 323 aa2.46□□□□□ -2.02
PTPN4-204ENST00000431283 C6orf62Q9GZU0 229 aaPredicted RBP2.46□□□□□ -2.02
PTPN4-204ENST00000431283 FGF20Q9NP95 211 aaPredicted RBP2.46□□□□□ -2.02
PTPN4-204ENST00000431283 C12orf4Q9NQ89 552 aa2.46□□□□□ -2.02
PTPN4-204ENST00000431283 ZC4H2Q9NQZ6 224 aa2.46□□□□□ -2.02
PTPN4-204ENST00000431283 TP53TG1Q9Y2A0 90 aa2.46□□□□□ -2.02
PTPN4-204ENST00000431283 RBM7Q9Y580 266 aaKnown RBP2.46□□□□□ -2.02
PTPN4-204ENST00000431283 TRBV9A0A0B4J1U6 114 aa2.45□□□□□ -2.02
PTPN4-204ENST00000431283 TRAV25A0A0B4J276 109 aa2.45□□□□□ -2.02
PTPN4-204ENST00000431283 PNMA8CA0A1B0GUJ8 204 aa2.45□□□□□ -2.02
PTPN4-204ENST00000431283 LOC100130705A0A1B0GUX0 176 aa2.45□□□□□ -2.02
PTPN4-204ENST00000431283 TRDCB7Z8K6 153 aa2.45□□□□□ -2.02
PTPN4-204ENST00000431283 CYB5BO43169 146 aa2.45□□□□□ -2.02
PTPN4-204ENST00000431283 OR2J3O76001 311 aa2.45□□□□□ -2.02
PTPN4-204ENST00000431283 NAPSAO96009 420 aa2.45□□□□□ -2.02
PTPN4-204ENST00000431283 SCTP09683 121 aa2.45□□□□□ -2.02
PTPN4-204ENST00000431283 APELAP0DMC3 54 aa2.45□□□□□ -2.02
PTPN4-204ENST00000431283 DEFA4P12838 97 aa2.45□□□□□ -2.02
PTPN4-204ENST00000431283 SRMP19623 302 aa2.45□□□□□ -2.02
PTPN4-204ENST00000431283 CBLN1P23435 193 aa2.45□□□□□ -2.02
PTPN4-204ENST00000431283 HTR2CP28335 458 aa2.45□□□□□ -2.02
PTPN4-204ENST00000431283 TCTAP57738 103 aa2.45□□□□□ -2.02
PTPN4-204ENST00000431283 UBE2KP61086 200 aa2.45□□□□□ -2.02
PTPN4-204ENST00000431283 HLA-DRB3P79483 266 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms