RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 CLEC12BQ2HXU8 276 aa11.11□□□□□ -0.63
HOXC4-202ENST00000430889 OR10G8Q8NGN5 311 aa11.11□□□□□ -0.63
HOXC4-202ENST00000430889 FXYD5Q96DB9 178 aa11.11□□□□□ -0.63
HOXC4-202ENST00000430889 MISP3Q96FF7 219 aa11.11□□□□□ -0.63
HOXC4-202ENST00000430889 IGF2BP2-AS1Q96M15 143 aa11.11□□□□□ -0.63
HOXC4-202ENST00000430889 TNFRSF19Q9NS68 423 aa11.11□□□□□ -0.63
HOXC4-202ENST00000430889 I3L2K1 104 aa11.1□□□□□ -0.63
HOXC4-202ENST00000430889 S100A9P06702 114 aaKnown RBP11.1□□□□□ -0.63
HOXC4-202ENST00000430889 MYCNOSP40205 109 aa11.1□□□□□ -0.63
HOXC4-202ENST00000430889 LGALS4P56470 323 aa11.1□□□□□ -0.63
HOXC4-202ENST00000430889 UBE2L3P68036 154 aaKnown RBP11.1□□□□□ -0.63
HOXC4-202ENST00000430889 S100A12P80511 92 aa11.1□□□□□ -0.63
HOXC4-202ENST00000430889 FBLN7Q53RD9 439 aa11.1□□□□□ -0.63
HOXC4-202ENST00000430889 CENPWQ5EE01 88 aa11.1□□□□□ -0.63
HOXC4-202ENST00000430889 BTF3L4Q96K17 158 aa11.1□□□□□ -0.63
HOXC4-202ENST00000430889 PITPNC1Q9UKF7 332 aa11.1□□□□□ -0.63
HOXC4-202ENST00000430889 TRAV9-1A0A075B6T8 112 aa11.09□□□□□ -0.63
HOXC4-202ENST00000430889 HELTA6NFD8 242 aa11.09□□□□□ -0.63
HOXC4-202ENST00000430889 MOSP00540 346 aa11.09□□□□□ -0.63
HOXC4-202ENST00000430889 PYYP10082 97 aa11.09□□□□□ -0.63
HOXC4-202ENST00000430889 PDLIM4P50479 330 aa11.09□□□□□ -0.63
HOXC4-202ENST00000430889 LHFPL4Q7Z7J7 247 aa11.09□□□□□ -0.63
HOXC4-202ENST00000430889 SGMS2Q8NHU3 365 aa11.09□□□□□ -0.63
HOXC4-202ENST00000430889 PAXXQ9BUH6 204 aa11.09□□□□□ -0.63
HOXC4-202ENST00000430889 GPR61Q9BZJ8 451 aa11.09□□□□□ -0.63
HOXC4-202ENST00000430889 GAR1Q9NY12 217 aaKnown RBP11.09□□□□□ -0.63
HOXC4-202ENST00000430889 IL36BQ9NZH7 164 aa11.09□□□□□ -0.63
HOXC4-202ENST00000430889 NBR2O15453 112 aa11.08□□□□□ -0.64
HOXC4-202ENST00000430889 GCGP01275 180 aa11.08□□□□□ -0.64
HOXC4-202ENST00000430889 APELAP0DMC3 54 aa11.08□□□□□ -0.64
HOXC4-202ENST00000430889 HNF1AP20823 631 aa11.08□□□□□ -0.64
HOXC4-202ENST00000430889 ZFP36P26651 326 aaKnown RBP11.08□□□□□ -0.64
HOXC4-202ENST00000430889 CEACAM3P40198 252 aa11.08□□□□□ -0.64
HOXC4-202ENST00000430889 UQCRFS1P47985 274 aa11.08□□□□□ -0.64
HOXC4-202ENST00000430889 SUMO1P63165 101 aaKnown RBP11.08□□□□□ -0.64
HOXC4-202ENST00000430889 Q8N6K4 173 aa11.08□□□□□ -0.64
HOXC4-202ENST00000430889 OR51M1Q9H341 326 aa11.08□□□□□ -0.64
HOXC4-202ENST00000430889 V9GYV3 84 aa11.08□□□□□ -0.64
HOXC4-202ENST00000430889 TACC2O95359 2948 aa11.08□□□□□ -0.64
HOXC4-202ENST00000430889 PCP4L1A6NKN8 68 aa11.08□□□□□ -0.64
HOXC4-202ENST00000430889 NDUFS7O75251 213 aa11.08□□□□□ -0.64
HOXC4-202ENST00000430889 IGLC1P0CG04 106 aa11.08□□□□□ -0.64
HOXC4-202ENST00000430889 HOXB4P17483 251 aaPredicted RBP11.08□□□□□ -0.64
HOXC4-202ENST00000430889 CDKN1AP38936 164 aa11.08□□□□□ -0.64
HOXC4-202ENST00000430889 GPR6P46095 362 aaPredicted RBP11.08□□□□□ -0.64
HOXC4-202ENST00000430889 GNG4P50150 75 aa11.08□□□□□ -0.64
HOXC4-202ENST00000430889 LINC00305Q7Z4B0 112 aa11.08□□□□□ -0.64
HOXC4-202ENST00000430889 ZNF329Q86UD4 541 aa11.08□□□□□ -0.64
HOXC4-202ENST00000430889 SIRPDQ9H106 197 aa11.08□□□□□ -0.64
HOXC4-202ENST00000430889 CHD8Q9HCK8 2581 aa11.07□□□□□ -0.64
HOXC4-202ENST00000430889 OOSP1A8MZH6 123 aa11.07□□□□□ -0.64
HOXC4-202ENST00000430889 C19orf84I3L1E1 186 aa11.07□□□□□ -0.64
HOXC4-202ENST00000430889 TAS2R60P59551 318 aa11.07□□□□□ -0.64
HOXC4-202ENST00000430889 YPEL3P61236 119 aaPredicted RBP11.07□□□□□ -0.64
HOXC4-202ENST00000430889 EBI3Q14213 229 aa11.07□□□□□ -0.64
HOXC4-202ENST00000430889 MMDQ15546 238 aa11.07□□□□□ -0.64
HOXC4-202ENST00000430889 PYY3Q5JQD4 70 aa11.07□□□□□ -0.64
HOXC4-202ENST00000430889 VMO1Q7Z5L0 202 aa11.07□□□□□ -0.64
HOXC4-202ENST00000430889 TMEM183AQ8IXX5 376 aa11.07□□□□□ -0.64
HOXC4-202ENST00000430889 DYNAPQ8N1N2 210 aa11.07□□□□□ -0.64
HOXC4-202ENST00000430889 IGFBPL1Q8WX77 278 aa11.07□□□□□ -0.64
HOXC4-202ENST00000430889 C22orf15Q8WYQ4 148 aa11.07□□□□□ -0.64
HOXC4-202ENST00000430889 PERPQ96FX8 193 aa11.07□□□□□ -0.64
HOXC4-202ENST00000430889 OSTCQ9NRP0 149 aa11.07□□□□□ -0.64
HOXC4-202ENST00000430889 CDC42EP3Q9UKI2 254 aa11.07□□□□□ -0.64
HOXC4-202ENST00000430889 HILPDAQ9Y5L2 63 aa11.07□□□□□ -0.64
HOXC4-202ENST00000430889 SPTBN1Q01082 2364 aaKnown RBP11.06□□□□□ -0.64
HOXC4-202ENST00000430889 A0A0U1RQK1 487 aa11.06□□□□□ -0.64
HOXC4-202ENST00000430889 ZNF320A2RRD8 509 aa11.06□□□□□ -0.64
HOXC4-202ENST00000430889 K7EIM0 57 aa11.06□□□□□ -0.64
HOXC4-202ENST00000430889 SLC17A3O00476 420 aa11.06□□□□□ -0.64
HOXC4-202ENST00000430889 GP9P14770 177 aa11.06□□□□□ -0.64
HOXC4-202ENST00000430889 OR5I1Q13606 314 aa11.06□□□□□ -0.64
HOXC4-202ENST00000430889 STXBP6Q8NFX7 210 aa11.06□□□□□ -0.64
HOXC4-202ENST00000430889 WNT10AQ9GZT5 417 aa11.06□□□□□ -0.64
HOXC4-202ENST00000430889 IGHV3-21A0A0B4J1V1 117 aa11.05□□□□□ -0.64
HOXC4-202ENST00000430889 ISLRO14498 428 aa11.05□□□□□ -0.64
HOXC4-202ENST00000430889 HYPMO75409 117 aa11.05□□□□□ -0.64
HOXC4-202ENST00000430889 GNLYP22749 145 aa11.05□□□□□ -0.64
HOXC4-202ENST00000430889 S100A2P29034 98 aa11.05□□□□□ -0.64
HOXC4-202ENST00000430889 EFNA4P52798 201 aa11.05□□□□□ -0.64
HOXC4-202ENST00000430889 C5orf64Q2M2E5 130 aa11.05□□□□□ -0.64
HOXC4-202ENST00000430889 MINOS1Q5TGZ0 78 aa11.05□□□□□ -0.64
HOXC4-202ENST00000430889 AJUBAQ96IF1 538 aa11.05□□□□□ -0.64
HOXC4-202ENST00000430889 HIST1H2BLQ99880 126 aa11.05□□□□□ -0.64
HOXC4-202ENST00000430889 GSX1Q9H4S2 264 aaPredicted RBP11.05□□□□□ -0.64
HOXC4-202ENST00000430889 NIT2Q9NQR4 276 aa11.05□□□□□ -0.64
HOXC4-202ENST00000430889 MINOS1-NBL1R4GNA1 71 aa11.05□□□□□ -0.64
HOXC4-202ENST00000430889 OVOL3O00110 214 aa11.04□□□□□ -0.64
HOXC4-202ENST00000430889 IGKV1-17P01599 117 aa11.04□□□□□ -0.64
HOXC4-202ENST00000430889 ORM2P19652 201 aa11.04□□□□□ -0.64
HOXC4-202ENST00000430889 PLGLAQ15195 96 aa11.04□□□□□ -0.64
HOXC4-202ENST00000430889 TIGITQ495A1 244 aa11.04□□□□□ -0.64
HOXC4-202ENST00000430889 ASPHD1Q5U4P2 390 aa11.04□□□□□ -0.64
HOXC4-202ENST00000430889 OR10D4PQ8NGN7 298 aa11.04□□□□□ -0.64
HOXC4-202ENST00000430889 OR1B1Q8NGR6 318 aa11.04□□□□□ -0.64
HOXC4-202ENST00000430889 UBTD1Q9HAC8 227 aa11.04□□□□□ -0.64
HOXC4-202ENST00000430889 IGHV2-70DA0A0C4DH43 119 aa11.04□□□□□ -0.64
HOXC4-202ENST00000430889 PEX7O00628 323 aa11.04□□□□□ -0.64
HOXC4-202ENST00000430889 PDZD11Q5EBL8 140 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms