RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 SMLR1H3BR10 107 aa8.48□□□□□ -1.05
CHD4-202ENST00000430771 BMPR1BO00238 502 aa8.48□□□□□ -1.05
CHD4-202ENST00000430771 ARPC5O15511 151 aa8.48□□□□□ -1.05
CHD4-202ENST00000430771 DFFBO76075 338 aa8.48□□□□□ -1.05
CHD4-202ENST00000430771 TRBV12-3P01733 135 aa8.48□□□□□ -1.05
CHD4-202ENST00000430771 OR10J1P30954 320 aa8.48□□□□□ -1.05
CHD4-202ENST00000430771 HOXD3P31249 432 aaPredicted RBP8.48□□□□□ -1.05
CHD4-202ENST00000430771 GAMTQ14353 236 aa8.48□□□□□ -1.05
CHD4-202ENST00000430771 Q5BKY6 102 aa8.48□□□□□ -1.05
CHD4-202ENST00000430771 TMEM144Q7Z5S9 345 aa8.48□□□□□ -1.05
CHD4-202ENST00000430771 ZNF546Q86UE3 836 aa8.48□□□□□ -1.05
CHD4-202ENST00000430771 OR5C1Q8NGR4 320 aa8.48□□□□□ -1.05
CHD4-202ENST00000430771 NPIPB3Q92617 1050 aa8.48□□□□□ -1.05
CHD4-202ENST00000430771 UQCC1Q9NVA1 299 aa8.48□□□□□ -1.05
CHD4-202ENST00000430771 MRPL36Q9P0J6 103 aaKnown RBP8.48□□□□□ -1.05
CHD4-202ENST00000430771 TNFSF18Q9UNG2 199 aa8.48□□□□□ -1.05
CHD4-202ENST00000430771 TENM1Q9UKZ4 2725 aa8.47□□□□□ -1.05
CHD4-202ENST00000430771 STAB1Q9NY15 2570 aa8.47□□□□□ -1.05
CHD4-202ENST00000430771 IGLC1P0CG04 106 aa8.47□□□□□ -1.05
CHD4-202ENST00000430771 ARL16Q0P5N6 197 aa8.47□□□□□ -1.05
CHD4-202ENST00000430771 ZNF345Q14585 488 aa8.47□□□□□ -1.05
CHD4-202ENST00000430771 CLINT1Q14677 625 aa8.47□□□□□ -1.05
CHD4-202ENST00000430771 VWC2Q2TAL6 325 aa8.47□□□□□ -1.05
CHD4-202ENST00000430771 ZNF600Q6ZNG1 722 aa8.47□□□□□ -1.05
CHD4-202ENST00000430771 C1QL4Q86Z23 238 aa8.47□□□□□ -1.05
CHD4-202ENST00000430771 THAP8Q8NA92 274 aa8.47□□□□□ -1.05
CHD4-202ENST00000430771 TRGV9Q99603 122 aa8.47□□□□□ -1.05
CHD4-202ENST00000430771 ATP5SQ99766 215 aa8.47□□□□□ -1.05
CHD4-202ENST00000430771 NPVFQ9HCQ7 196 aa8.47□□□□□ -1.05
CHD4-202ENST00000430771 RNF222A6NCQ9 220 aa8.46□□□□□ -1.06
CHD4-202ENST00000430771 HMSDA8MTL9 139 aa8.46□□□□□ -1.06
CHD4-202ENST00000430771 NDUFA4O00483 81 aa8.46□□□□□ -1.06
CHD4-202ENST00000430771 TSPAN15O95858 294 aa8.46□□□□□ -1.06
CHD4-202ENST00000430771 TOMM40O96008 361 aa8.46□□□□□ -1.06
CHD4-202ENST00000430771 C1QBP02746 253 aa8.46□□□□□ -1.06
CHD4-202ENST00000430771 CTSGP08311 255 aa8.46□□□□□ -1.06
CHD4-202ENST00000430771 ADMP35318 185 aa8.46□□□□□ -1.06
CHD4-202ENST00000430771 SLURP1P55000 103 aa8.46□□□□□ -1.06
CHD4-202ENST00000430771 NHLH2Q02577 135 aa8.46□□□□□ -1.06
CHD4-202ENST00000430771 OR2F1Q13607 317 aa8.46□□□□□ -1.06
CHD4-202ENST00000430771 RAB31Q13636 194 aa8.46□□□□□ -1.06
CHD4-202ENST00000430771 ZNF266Q14584 549 aa8.46□□□□□ -1.06
CHD4-202ENST00000430771 MLANAQ16655 118 aa8.46□□□□□ -1.06
CHD4-202ENST00000430771 FAM106AQ4KMX7 169 aa8.46□□□□□ -1.06
CHD4-202ENST00000430771 TEPPQ6URK8 271 aa8.46□□□□□ -1.06
CHD4-202ENST00000430771 TREML4Q6UXN2 200 aa8.46□□□□□ -1.06
CHD4-202ENST00000430771 REC114Q7Z4M0 266 aa8.46□□□□□ -1.06
CHD4-202ENST00000430771 DUX3Q96PT4 197 aa8.46□□□□□ -1.06
CHD4-202ENST00000430771 CHRDL1Q9BU40 450 aa8.46□□□□□ -1.06
CHD4-202ENST00000430771 MFFQ9GZY8 342 aa8.46□□□□□ -1.06
CHD4-202ENST00000430771 KCNIP2Q9NS61 270 aa8.46□□□□□ -1.06
CHD4-202ENST00000430771 PEMTQ9UBM1 199 aa8.46□□□□□ -1.06
CHD4-202ENST00000430771 FBXL17Q9UF56 701 aa8.46□□□□□ -1.06
CHD4-202ENST00000430771 DNHD1Q96M86 4753 aa8.45□□□□□ -1.06
CHD4-202ENST00000430771 MPDU1O75352 247 aa8.45□□□□□ -1.06
CHD4-202ENST00000430771 IFNA5P01569 189 aa8.45□□□□□ -1.06
CHD4-202ENST00000430771 FGF7P21781 194 aa8.45□□□□□ -1.06
CHD4-202ENST00000430771 AP2S1P53680 142 aaPredicted RBP8.45□□□□□ -1.06
CHD4-202ENST00000430771 YPEL3P61236 119 aaPredicted RBP8.45□□□□□ -1.06
CHD4-202ENST00000430771 TIGITQ495A1 244 aa8.45□□□□□ -1.06
CHD4-202ENST00000430771 ZFP69Q49AA0 526 aa8.45□□□□□ -1.06
CHD4-202ENST00000430771 GPHB5Q86YW7 130 aa8.45□□□□□ -1.06
CHD4-202ENST00000430771 TMEM190Q8WZ59 177 aa8.45□□□□□ -1.06
CHD4-202ENST00000430771 HYLS1Q96M11 299 aa8.45□□□□□ -1.06
CHD4-202ENST00000430771 GINS3Q9BRX5 216 aa8.45□□□□□ -1.06
CHD4-202ENST00000430771 SMIM3Q9BZL3 60 aa8.45□□□□□ -1.06
CHD4-202ENST00000430771 WDR83OSQ9Y284 106 aa8.45□□□□□ -1.06
CHD4-202ENST00000430771 IGKV1D-37A0A075B6S9 117 aa8.44□□□□□ -1.06
CHD4-202ENST00000430771 A8MWP6 167 aa8.44□□□□□ -1.06
CHD4-202ENST00000430771 LGALS9O00182 355 aa8.44□□□□□ -1.06
CHD4-202ENST00000430771 OVOL1O14753 267 aa8.44□□□□□ -1.06
CHD4-202ENST00000430771 PFDN1O60925 122 aa8.44□□□□□ -1.06
CHD4-202ENST00000430771 OR2C1O95371 312 aa8.44□□□□□ -1.06
CHD4-202ENST00000430771 CFDP00746 253 aaPredicted RBP8.44□□□□□ -1.06
CHD4-202ENST00000430771 IGKV1-17P01599 117 aa8.44□□□□□ -1.06
CHD4-202ENST00000430771 SYNJ2BPP57105 145 aa8.44□□□□□ -1.06
CHD4-202ENST00000430771 SELENOTP62341 195 aa8.44□□□□□ -1.06
CHD4-202ENST00000430771 LINC00482Q8N8I6 264 aa8.44□□□□□ -1.06
CHD4-202ENST00000430771 BPIFCQ8NFQ6 507 aa8.44□□□□□ -1.06
CHD4-202ENST00000430771 OR51G1Q8NGK1 321 aa8.44□□□□□ -1.06
CHD4-202ENST00000430771 Q8WTZ3 238 aa8.44□□□□□ -1.06
CHD4-202ENST00000430771 UFC1Q9Y3C8 167 aa8.44□□□□□ -1.06
CHD4-202ENST00000430771 LSM4Q9Y4Z0 139 aaKnown RBP8.44□□□□□ -1.06
CHD4-202ENST00000430771 PUS1Q9Y606 427 aaKnown RBP eCLIP8.44□□□□□ -1.06
CHD4-202ENST00000430771 IGKV1OR2-108A0A075B7D4 117 aa8.43□□□□□ -1.06
CHD4-202ENST00000430771 BORCS7-ASMTA0A0B4J1R7 106 aa8.43□□□□□ -1.06
CHD4-202ENST00000430771 IGHV3-35A0A0C4DH35 117 aa8.43□□□□□ -1.06
CHD4-202ENST00000430771 A0A0D9SG52 128 aa8.43□□□□□ -1.06
CHD4-202ENST00000430771 KANTRA0A1W2PQU2 76 aa8.43□□□□□ -1.06
CHD4-202ENST00000430771 C17orf112F2Z3M2 114 aa8.43□□□□□ -1.06
CHD4-202ENST00000430771 TAAR5O14804 337 aa8.43□□□□□ -1.06
CHD4-202ENST00000430771 YIF1AO95070 293 aa8.43□□□□□ -1.06
CHD4-202ENST00000430771 RD3LP0DJH9 198 aa8.43□□□□□ -1.06
CHD4-202ENST00000430771 CD33P20138 364 aa8.43□□□□□ -1.06
CHD4-202ENST00000430771 S100A7P31151 101 aa8.43□□□□□ -1.06
CHD4-202ENST00000430771 BMI1P35226 326 aa8.43□□□□□ -1.06
CHD4-202ENST00000430771 CAMLGP49069 296 aa8.43□□□□□ -1.06
CHD4-202ENST00000430771 ELLP55199 621 aaPredicted RBP8.43□□□□□ -1.06
CHD4-202ENST00000430771 KLF5Q13887 457 aaPredicted RBP8.43□□□□□ -1.06
CHD4-202ENST00000430771 BTNL8Q6UX41 500 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 151.7 ms