RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 RAB2BQ8WUD1 216 aa8.58□□□□□ -1.04
HDAC4-202ENST00000430200 GLMPQ8WWB7 406 aa8.58□□□□□ -1.04
HDAC4-202ENST00000430200 DIRAS2Q96HU8 199 aa8.58□□□□□ -1.04
HDAC4-202ENST00000430200 C6orf62Q9GZU0 229 aaPredicted RBP8.58□□□□□ -1.04
HDAC4-202ENST00000430200 C11orf68Q9H3H3 251 aaKnown RBP8.58□□□□□ -1.04
HDAC4-202ENST00000430200 RABAC1Q9UI14 185 aa8.58□□□□□ -1.04
HDAC4-202ENST00000430200 C14orf166Q9Y224 244 aaKnown RBP8.58□□□□□ -1.04
HDAC4-202ENST00000430200 TRAV2A0A0B4J234 112 aa8.57□□□□□ -1.04
HDAC4-202ENST00000430200 DISC1C4P0D8 188 aa8.57□□□□□ -1.04
HDAC4-202ENST00000430200 DEFB1P60022 68 aa8.57□□□□□ -1.04
HDAC4-202ENST00000430200 LYZL2Q7Z4W2 148 aa8.57□□□□□ -1.04
HDAC4-202ENST00000430200 FAM219AQ8IW50 185 aa8.57□□□□□ -1.04
HDAC4-202ENST00000430200 PHLDA1Q8WV24 401 aaPredicted RBP8.57□□□□□ -1.04
HDAC4-202ENST00000430200 HEYLQ9NQ87 328 aaPredicted RBP8.57□□□□□ -1.04
HDAC4-202ENST00000430200 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.57□□□□□ -1.04
HDAC4-202ENST00000430200 V9GYH0 126 aa8.57□□□□□ -1.04
HDAC4-202ENST00000430200 DNAH17Q9UFH2 4485 aa8.56□□□□□ -1.04
HDAC4-202ENST00000430200 B3GALNT1O75752 331 aa8.56□□□□□ -1.04
HDAC4-202ENST00000430200 ATG12O94817 140 aa8.56□□□□□ -1.04
HDAC4-202ENST00000430200 RBMY1A1P0DJD3 496 aaKnown RBP8.56□□□□□ -1.04
HDAC4-202ENST00000430200 RBMY1CP0DJD4 496 aa8.56□□□□□ -1.04
HDAC4-202ENST00000430200 NPY1RP25929 384 aa8.56□□□□□ -1.04
HDAC4-202ENST00000430200 OR10J1P30954 320 aa8.56□□□□□ -1.04
HDAC4-202ENST00000430200 TNFSF8P32971 234 aa8.56□□□□□ -1.04
HDAC4-202ENST00000430200 HTR2BP41595 481 aa8.56□□□□□ -1.04
HDAC4-202ENST00000430200 TMBIM6P55061 237 aa8.56□□□□□ -1.04
HDAC4-202ENST00000430200 RPL11P62913 178 aaKnown RBP8.56□□□□□ -1.04
HDAC4-202ENST00000430200 PRR20EP86478 221 aa8.56□□□□□ -1.04
HDAC4-202ENST00000430200 PRR20CP86479 221 aa8.56□□□□□ -1.04
HDAC4-202ENST00000430200 PRR20DP86480 221 aa8.56□□□□□ -1.04
HDAC4-202ENST00000430200 PRR20BP86481 221 aa8.56□□□□□ -1.04
HDAC4-202ENST00000430200 PRR20AP86496 221 aa8.56□□□□□ -1.04
HDAC4-202ENST00000430200 KLF9Q13886 244 aaPredicted RBP8.56□□□□□ -1.04
HDAC4-202ENST00000430200 RBMY1FQ15415 496 aaKnown RBP8.56□□□□□ -1.04
HDAC4-202ENST00000430200 ZNF79Q15937 498 aa8.56□□□□□ -1.04
HDAC4-202ENST00000430200 C15orf40Q8WUR7 153 aa8.56□□□□□ -1.04
HDAC4-202ENST00000430200 GATAD1Q8WUU5 269 aa8.56□□□□□ -1.04
HDAC4-202ENST00000430200 METTL26Q96S19 204 aa8.56□□□□□ -1.04
HDAC4-202ENST00000430200 RARRES2Q99969 163 aa8.56□□□□□ -1.04
HDAC4-202ENST00000430200 ENY2Q9NPA8 101 aa8.56□□□□□ -1.04
HDAC4-202ENST00000430200 X6R8D5 127 aa8.56□□□□□ -1.04
HDAC4-202ENST00000430200 PKHD1P08F94 4074 aa8.56□□□□□ -1.04
HDAC4-202ENST00000430200 IGKV1D-37A0A075B6S9 117 aa8.55□□□□□ -1.04
HDAC4-202ENST00000430200 CEBPZOSA8MTT3 80 aa8.55□□□□□ -1.04
HDAC4-202ENST00000430200 DNASE2O00115 360 aaPredicted RBP8.55□□□□□ -1.04
HDAC4-202ENST00000430200 NPPCP23582 126 aa8.55□□□□□ -1.04
HDAC4-202ENST00000430200 SUB1P53999 127 aaKnown RBP eCLIP8.55□□□□□ -1.04
HDAC4-202ENST00000430200 DHODHQ02127 395 aa8.55□□□□□ -1.04
HDAC4-202ENST00000430200 C16orf54Q6UWD8 224 aa8.55□□□□□ -1.04
HDAC4-202ENST00000430200 NPIPB3Q92617 1050 aa8.55□□□□□ -1.04
HDAC4-202ENST00000430200 ACY3Q96HD9 319 aa8.55□□□□□ -1.04
HDAC4-202ENST00000430200 PRRT1Q99946 306 aa8.55□□□□□ -1.04
HDAC4-202ENST00000430200 RBKSQ9H477 322 aa8.55□□□□□ -1.04
HDAC4-202ENST00000430200 CLEC5AQ9NY25 188 aa8.55□□□□□ -1.04
HDAC4-202ENST00000430200 HSPB7Q9UBY9 170 aa8.55□□□□□ -1.04
HDAC4-202ENST00000430200 KIAA1109Q2LD37 5005 aa8.55□□□□□ -1.04
HDAC4-202ENST00000430200 IGHV4-28A0A0C4DH34 117 aa8.54□□□□□ -1.04
HDAC4-202ENST00000430200 IL4P05112 153 aa8.54□□□□□ -1.04
HDAC4-202ENST00000430200 SULT1A3P0DMM9 295 aa8.54□□□□□ -1.04
HDAC4-202ENST00000430200 SULT1A4P0DMN0 295 aa8.54□□□□□ -1.04
HDAC4-202ENST00000430200 AKR1C4P17516 323 aa8.54□□□□□ -1.04
HDAC4-202ENST00000430200 CSNK1G2-AS1Q8NCQ2 148 aa8.54□□□□□ -1.04
HDAC4-202ENST00000430200 OR1S2Q8NGQ3 325 aa8.54□□□□□ -1.04
HDAC4-202ENST00000430200 RNASEH2CQ8TDP1 164 aaKnown RBP8.54□□□□□ -1.04
HDAC4-202ENST00000430200 IL22RA2Q969J5 263 aa8.54□□□□□ -1.04
HDAC4-202ENST00000430200 GRAMD2BQ96HH9 432 aa8.54□□□□□ -1.04
HDAC4-202ENST00000430200 BCL7BQ9BQE9 202 aa8.54□□□□□ -1.04
HDAC4-202ENST00000430200 MCUBQ9NWR8 336 aa8.54□□□□□ -1.04
HDAC4-202ENST00000430200 FBXL17Q9UF56 701 aa8.54□□□□□ -1.04
HDAC4-202ENST00000430200 CELA1Q9UNI1 258 aa8.54□□□□□ -1.04
HDAC4-202ENST00000430200 PKD1P98161 4303 aa8.53□□□□□ -1.04
HDAC4-202ENST00000430200 IGKV1OR2-108A0A075B7D4 117 aa8.53□□□□□ -1.04
HDAC4-202ENST00000430200 ELOA3CA0A087WX78 387 aaPredicted RBP8.53□□□□□ -1.04
HDAC4-202ENST00000430200 A0A0B4J2A0 478 aa8.53□□□□□ -1.04
HDAC4-202ENST00000430200 FAM90A26D6RGX4 464 aa8.53□□□□□ -1.04
HDAC4-202ENST00000430200 TOMM40O96008 361 aa8.53□□□□□ -1.04
HDAC4-202ENST00000430200 HNRNPCP07910 306 aaKnown RBP eCLIP8.53□□□□□ -1.04
HDAC4-202ENST00000430200 PSG1P11464 419 aa8.53□□□□□ -1.04
HDAC4-202ENST00000430200 SLC25A4P12235 298 aa8.53□□□□□ -1.04
HDAC4-202ENST00000430200 YPEL3P61236 119 aaPredicted RBP8.53□□□□□ -1.04
HDAC4-202ENST00000430200 PAFAH1B2P68402 229 aa8.53□□□□□ -1.04
HDAC4-202ENST00000430200 ZNF90Q03938 601 aa8.53□□□□□ -1.04
HDAC4-202ENST00000430200 SMCO1Q147U7 214 aa8.53□□□□□ -1.04
HDAC4-202ENST00000430200 PSMG4Q5JS54 123 aa8.53□□□□□ -1.04
HDAC4-202ENST00000430200 ACTL10Q5JWF8 245 aa8.53□□□□□ -1.04
HDAC4-202ENST00000430200 GDF5OSQ5U4N7 250 aa8.53□□□□□ -1.04
HDAC4-202ENST00000430200 STHQ8IWL8 128 aa8.53□□□□□ -1.04
HDAC4-202ENST00000430200 MCFD2Q8NI22 146 aa8.53□□□□□ -1.04
HDAC4-202ENST00000430200 C11orf45Q8TAV5 145 aa8.53□□□□□ -1.04
HDAC4-202ENST00000430200 DTD1Q8TEA8 209 aa8.53□□□□□ -1.04
HDAC4-202ENST00000430200 SCRT1Q9BWW7 348 aa8.53□□□□□ -1.04
HDAC4-202ENST00000430200 RBM38Q9H0Z9 239 aaKnown RBP8.53□□□□□ -1.04
HDAC4-202ENST00000430200 TMEM231Q9H6L2 316 aa8.53□□□□□ -1.04
HDAC4-202ENST00000430200 SHPKQ9UHJ6 478 aa8.53□□□□□ -1.04
HDAC4-202ENST00000430200 RPS10-NUDT3A0A1W2PQS6 291 aa8.52□□□□□ -1.05
HDAC4-202ENST00000430200 ZNF705EA8MWA4 302 aaPredicted RBP8.52□□□□□ -1.05
HDAC4-202ENST00000430200 BUB3O43684 328 aa8.52□□□□□ -1.05
HDAC4-202ENST00000430200 PITX3O75364 302 aa8.52□□□□□ -1.05
HDAC4-202ENST00000430200 CD5P06127 495 aa8.52□□□□□ -1.05
HDAC4-202ENST00000430200 DHRS2Q13268 280 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms