RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 LINC00305Q7Z4B0 112 aa10.14□□□□□ -0.79
CDH3-202ENST00000429102 TCTEX1D1Q8N7M0 179 aa10.14□□□□□ -0.79
CDH3-202ENST00000429102 TMEM14BQ9NUH8 114 aa10.14□□□□□ -0.79
CDH3-202ENST00000429102 PRR33A8MZF0 331 aa10.14□□□□□ -0.79
CDH3-202ENST00000429102 AMY1AP04745 511 aa10.14□□□□□ -0.79
CDH3-202ENST00000429102 AREGP15514 252 aa10.14□□□□□ -0.79
CDH3-202ENST00000429102 UQCRFS1P47985 274 aa10.14□□□□□ -0.79
CDH3-202ENST00000429102 COMPP49747 757 aaPredicted RBP10.14□□□□□ -0.79
CDH3-202ENST00000429102 FXYD7P58549 80 aa10.14□□□□□ -0.79
CDH3-202ENST00000429102 TEX43Q6ZNM6 134 aa10.14□□□□□ -0.79
CDH3-202ENST00000429102 NUDT10Q8NFP7 164 aa10.14□□□□□ -0.79
CDH3-202ENST00000429102 NUDT11Q96G61 164 aa10.14□□□□□ -0.79
CDH3-202ENST00000429102 KCNS1Q96KK3 526 aa10.14□□□□□ -0.79
CDH3-202ENST00000429102 RNF2Q99496 336 aa10.14□□□□□ -0.79
CDH3-202ENST00000429102 SLC25A33Q9BSK2 321 aa10.14□□□□□ -0.79
CDH3-202ENST00000429102 PRNDQ9UKY0 176 aa10.14□□□□□ -0.79
CDH3-202ENST00000429102 SPG11Q96JI7 2443 aa10.14□□□□□ -0.79
CDH3-202ENST00000429102 UPK2O00526 184 aa10.14□□□□□ -0.79
CDH3-202ENST00000429102 NUP35Q8NFH5 326 aa10.14□□□□□ -0.79
CDH3-202ENST00000429102 FNDC4Q9H6D8 234 aaPredicted RBP10.14□□□□□ -0.79
CDH3-202ENST00000429102 LYNX1G3V0Z9 82 aa10.13□□□□□ -0.79
CDH3-202ENST00000429102 LYNX1P0DP58 116 aa10.13□□□□□ -0.79
CDH3-202ENST00000429102 GDF5OSQ5U4N7 250 aa10.13□□□□□ -0.79
CDH3-202ENST00000429102 C1orf174Q8IYL3 243 aa10.13□□□□□ -0.79
CDH3-202ENST00000429102 SSUH2Q9Y2M2 353 aa10.13□□□□□ -0.79
CDH3-202ENST00000429102 TRAV17A0A0B4J275 112 aa10.13□□□□□ -0.79
CDH3-202ENST00000429102 hDV102S1A0JD36 115 aa10.13□□□□□ -0.79
CDH3-202ENST00000429102 FAM87AP0C7U9 286 aa10.13□□□□□ -0.79
CDH3-202ENST00000429102 CORO2AQ92828 525 aa10.13□□□□□ -0.79
CDH3-202ENST00000429102 DAZAP1Q96EP5 407 aaKnown RBP10.13□□□□□ -0.79
CDH3-202ENST00000429102 UQCR10Q9UDW1 63 aa10.13□□□□□ -0.79
CDH3-202ENST00000429102 IGHV1-46P01743 117 aa10.13□□□□□ -0.79
CDH3-202ENST00000429102 SELENOTP62341 195 aa10.13□□□□□ -0.79
CDH3-202ENST00000429102 GNB1LQ9BYB4 327 aa10.13□□□□□ -0.79
CDH3-202ENST00000429102 BET1LQ9NYM9 111 aa10.13□□□□□ -0.79
CDH3-202ENST00000429102 DKK4Q9UBT3 224 aa10.13□□□□□ -0.79
CDH3-202ENST00000429102 SLC25A10Q9UBX3 287 aaPredicted RBP10.13□□□□□ -0.79
CDH3-202ENST00000429102 SLC25A15Q9Y619 301 aa10.13□□□□□ -0.79
CDH3-202ENST00000429102 IGF2RP11717 2491 aa10.12□□□□□ -0.79
CDH3-202ENST00000429102 IGHV3OR16-8A0A075B7F1 116 aa10.12□□□□□ -0.79
CDH3-202ENST00000429102 K7EM74 188 aa10.12□□□□□ -0.79
CDH3-202ENST00000429102 RNASE2P10153 161 aaKnown RBP10.12□□□□□ -0.79
CDH3-202ENST00000429102 SPACA3Q8IXA5 215 aa10.12□□□□□ -0.79
CDH3-202ENST00000429102 OR4B1Q8NGF8 309 aa10.12□□□□□ -0.79
CDH3-202ENST00000429102 C18orf32Q8TCD1 76 aa10.12□□□□□ -0.79
CDH3-202ENST00000429102 DDB2Q92466 427 aa10.12□□□□□ -0.79
CDH3-202ENST00000429102 hADV38S2A0JD32 116 aa10.12□□□□□ -0.79
CDH3-202ENST00000429102 COX7A1P24310 79 aa10.12□□□□□ -0.79
CDH3-202ENST00000429102 CNTFRP26992 372 aa10.12□□□□□ -0.79
CDH3-202ENST00000429102 WDR73Q6P4I2 378 aa10.12□□□□□ -0.79
CDH3-202ENST00000429102 NIT1Q86X76 327 aa10.12□□□□□ -0.79
CDH3-202ENST00000429102 NEUROG1Q92886 237 aa10.12□□□□□ -0.79
CDH3-202ENST00000429102 SFXN3Q9BWM7 321 aa10.12□□□□□ -0.79
CDH3-202ENST00000429102 FOXA2Q9Y261 457 aaPredicted RBP10.12□□□□□ -0.79
CDH3-202ENST00000429102 LYZP61626 148 aa10.12□□□□□ -0.79
CDH3-202ENST00000429102 PRCDQ00LT1 54 aa10.12□□□□□ -0.79
CDH3-202ENST00000429102 WT1-ASQ06250 92 aa10.12□□□□□ -0.79
CDH3-202ENST00000429102 CD69Q07108 199 aa10.12□□□□□ -0.79
CDH3-202ENST00000429102 LYPD2Q6UXB3 125 aa10.12□□□□□ -0.79
CDH3-202ENST00000429102 SEM1Q6ZVN7 128 aa10.12□□□□□ -0.79
CDH3-202ENST00000429102 MUC15Q8N387 334 aa10.12□□□□□ -0.79
CDH3-202ENST00000429102 NOTCH3Q9UM47 2321 aa10.11□□□□□ -0.79
CDH3-202ENST00000429102 TMEM11P17152 192 aa10.11□□□□□ -0.79
CDH3-202ENST00000429102 MZT1Q08AG7 82 aa10.11□□□□□ -0.79
CDH3-202ENST00000429102 PLGLAQ15195 96 aa10.11□□□□□ -0.79
CDH3-202ENST00000429102 EBLN2Q6P2I7 272 aa10.11□□□□□ -0.79
CDH3-202ENST00000429102 C20orf144Q9BQM9 153 aa10.11□□□□□ -0.79
CDH3-202ENST00000429102 SERTM2A0A1B0GWG4 89 aa10.11□□□□□ -0.79
CDH3-202ENST00000429102 F2RL2O00254 374 aa10.11□□□□□ -0.79
CDH3-202ENST00000429102 PEX7O00628 323 aa10.11□□□□□ -0.79
CDH3-202ENST00000429102 IGLV2-8P01709 118 aa10.11□□□□□ -0.79
CDH3-202ENST00000429102 KLHDC1Q8N7A1 406 aa10.11□□□□□ -0.79
CDH3-202ENST00000429102 GAFA1Q96PS6 74 aa10.11□□□□□ -0.79
CDH3-202ENST00000429102 SLC25A2Q9BXI2 301 aa10.11□□□□□ -0.79
CDH3-202ENST00000429102 IGHV3-35A0A0C4DH35 117 aa10.11□□□□□ -0.79
CDH3-202ENST00000429102 C9JCJ5 164 aa10.11□□□□□ -0.79
CDH3-202ENST00000429102 HSBP1L1C9JCN9 74 aa10.11□□□□□ -0.79
CDH3-202ENST00000429102 J3QW42 95 aa10.11□□□□□ -0.79
CDH3-202ENST00000429102 RBP4P02753 201 aa10.11□□□□□ -0.79
CDH3-202ENST00000429102 IGLC2P0DOY2 106 aa10.11□□□□□ -0.79
CDH3-202ENST00000429102 IGLC3P0DOY3 106 aa10.11□□□□□ -0.79
CDH3-202ENST00000429102 PPOXP50336 477 aa10.11□□□□□ -0.79
CDH3-202ENST00000429102 TBR1Q16650 682 aa10.11□□□□□ -0.79
CDH3-202ENST00000429102 PRNTQ86SH4 94 aa10.11□□□□□ -0.79
CDH3-202ENST00000429102 PDPNQ86YL7 162 aa10.11□□□□□ -0.79
CDH3-202ENST00000429102 TXNDC17Q9BRA2 123 aa10.11□□□□□ -0.79
CDH3-202ENST00000429102 ZNF430Q9H8G1 570 aaPredicted RBP10.11□□□□□ -0.79
CDH3-202ENST00000429102 LOC389332A0A1B0GUA5 103 aa10.1□□□□□ -0.79
CDH3-202ENST00000429102 CHEK1O14757 476 aa10.1□□□□□ -0.79
CDH3-202ENST00000429102 HLA-DQA1P01909 254 aa10.1□□□□□ -0.79
CDH3-202ENST00000429102 EXOC3-AS1Q8N2X6 119 aa10.1□□□□□ -0.79
CDH3-202ENST00000429102 OR1L8Q8NGR8 309 aa10.1□□□□□ -0.79
CDH3-202ENST00000429102 RNASE8Q8TDE3 154 aaKnown RBP10.1□□□□□ -0.79
CDH3-202ENST00000429102 NUDT3O95989 172 aa10.1□□□□□ -0.79
CDH3-202ENST00000429102 TNFSF4P23510 183 aa10.1□□□□□ -0.79
CDH3-202ENST00000429102 CA7P43166 264 aa10.1□□□□□ -0.79
CDH3-202ENST00000429102 TMEM177Q53S58 311 aa10.1□□□□□ -0.79
CDH3-202ENST00000429102 PATE2Q6UY27 113 aa10.1□□□□□ -0.79
CDH3-202ENST00000429102 LINC00322Q6ZN03 302 aaPredicted RBP10.1□□□□□ -0.79
CDH3-202ENST00000429102 CIARTQ8N365 385 aaPredicted RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms