RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 OR52E5Q8NH55 327 aa12.47□□□□□ -0.41
TRIM39-209ENST00000428728 GRAMD2BQ96HH9 432 aa12.47□□□□□ -0.41
TRIM39-209ENST00000428728 DIRAS2Q96HU8 199 aa12.47□□□□□ -0.41
TRIM39-209ENST00000428728 PRR13Q9NZ81 148 aa12.47□□□□□ -0.41
TRIM39-209ENST00000428728 TRAV30A0A087WSZ9 112 aa12.46□□□□□ -0.41
TRIM39-209ENST00000428728 KNCNA6PVL3 124 aa12.46□□□□□ -0.41
TRIM39-209ENST00000428728 IGLC1P0CG04 106 aa12.46□□□□□ -0.41
TRIM39-209ENST00000428728 C2orf83Q53S99 150 aa12.46□□□□□ -0.41
TRIM39-209ENST00000428728 PRSS54Q6PEW0 395 aa12.46□□□□□ -0.41
TRIM39-209ENST00000428728 TRPT1Q86TN4 253 aaKnown RBP12.46□□□□□ -0.41
TRIM39-209ENST00000428728 CLVS1Q8IUQ0 354 aaPredicted RBP12.46□□□□□ -0.41
TRIM39-209ENST00000428728 OR51S1Q8NGJ8 323 aa12.46□□□□□ -0.41
TRIM39-209ENST00000428728 GPR132Q9UNW8 380 aa12.46□□□□□ -0.41
TRIM39-209ENST00000428728 IFNA4P05014 189 aa12.45□□□□□ -0.42
TRIM39-209ENST00000428728 SLC25A4P12235 298 aa12.45□□□□□ -0.42
TRIM39-209ENST00000428728 C4BPBP20851 252 aa12.45□□□□□ -0.42
TRIM39-209ENST00000428728 NPY1RP25929 384 aa12.45□□□□□ -0.42
TRIM39-209ENST00000428728 OR10J1P30954 320 aa12.45□□□□□ -0.42
TRIM39-209ENST00000428728 DHRS2Q13268 280 aa12.45□□□□□ -0.42
TRIM39-209ENST00000428728 RNASEH2CQ8TDP1 164 aaKnown RBP12.45□□□□□ -0.42
TRIM39-209ENST00000428728 DCANP1Q8TF63 244 aa12.45□□□□□ -0.42
TRIM39-209ENST00000428728 TMEM170AQ8WVE7 144 aa12.45□□□□□ -0.42
TRIM39-209ENST00000428728 PRRT1Q99946 306 aa12.45□□□□□ -0.42
TRIM39-209ENST00000428728 CTDSPLO15194 276 aa12.44□□□□□ -0.42
TRIM39-209ENST00000428728 HNRNPCP07910 306 aaKnown RBP eCLIP12.44□□□□□ -0.42
TRIM39-209ENST00000428728 EIF2B2P49770 351 aaKnown RBP12.44□□□□□ -0.42
TRIM39-209ENST00000428728 ACTL10Q5JWF8 245 aa12.44□□□□□ -0.42
TRIM39-209ENST00000428728 Q8NAQ8 132 aa12.44□□□□□ -0.42
TRIM39-209ENST00000428728 Q8WTZ3 238 aa12.44□□□□□ -0.42
TRIM39-209ENST00000428728 ACY3Q96HD9 319 aa12.44□□□□□ -0.42
TRIM39-209ENST00000428728 CCDC59Q9P031 241 aaKnown RBP12.44□□□□□ -0.42
TRIM39-209ENST00000428728 ANKRD20A5PA0PJZ0 165 aa12.43□□□□□ -0.42
TRIM39-209ENST00000428728 IL4P05112 153 aa12.43□□□□□ -0.42
TRIM39-209ENST00000428728 GIG44P09565 113 aaPredicted RBP12.43□□□□□ -0.42
TRIM39-209ENST00000428728 SULT1A3P0DMM9 295 aa12.43□□□□□ -0.42
TRIM39-209ENST00000428728 SULT1A4P0DMN0 295 aa12.43□□□□□ -0.42
TRIM39-209ENST00000428728 SPP1P10451 314 aa12.43□□□□□ -0.42
TRIM39-209ENST00000428728 USF2Q15853 346 aaPredicted RBP12.43□□□□□ -0.42
TRIM39-209ENST00000428728 PSMG4Q5JS54 123 aa12.43□□□□□ -0.42
TRIM39-209ENST00000428728 LGALS9CQ6DKI2 356 aa12.43□□□□□ -0.42
TRIM39-209ENST00000428728 DYNC2LI1Q8TCX1 351 aa12.43□□□□□ -0.42
TRIM39-209ENST00000428728 GLMPQ8WWB7 406 aa12.43□□□□□ -0.42
TRIM39-209ENST00000428728 NPIPB3Q92617 1050 aa12.43□□□□□ -0.42
TRIM39-209ENST00000428728 TMEM56-RWDD3S4R434 201 aa12.43□□□□□ -0.42
TRIM39-209ENST00000428728 U3KQE9 123 aa12.43□□□□□ -0.42
TRIM39-209ENST00000428728 IGHV4-28A0A0C4DH34 117 aa12.42□□□□□ -0.42
TRIM39-209ENST00000428728 HELTA6NFD8 242 aa12.42□□□□□ -0.42
TRIM39-209ENST00000428728 YPEL3P61236 119 aaPredicted RBP12.42□□□□□ -0.42
TRIM39-209ENST00000428728 ETFRF1Q6IPR1 90 aa12.42□□□□□ -0.42
TRIM39-209ENST00000428728 MORN3Q6PF18 240 aaPredicted RBP12.42□□□□□ -0.42
TRIM39-209ENST00000428728 C16orf54Q6UWD8 224 aa12.42□□□□□ -0.42
TRIM39-209ENST00000428728 RAB2BQ8WUD1 216 aa12.42□□□□□ -0.42
TRIM39-209ENST00000428728 MCUBQ9NWR8 336 aa12.42□□□□□ -0.42
TRIM39-209ENST00000428728 CLEC5AQ9NY25 188 aa12.42□□□□□ -0.42
TRIM39-209ENST00000428728 IFNA10P01566 189 aa12.41□□□□□ -0.42
TRIM39-209ENST00000428728 AKR1C4P17516 323 aa12.41□□□□□ -0.42
TRIM39-209ENST00000428728 TMEM41BQ5BJD5 291 aa12.41□□□□□ -0.42
TRIM39-209ENST00000428728 C2CD4CQ8TF44 421 aa12.41□□□□□ -0.42
TRIM39-209ENST00000428728 IL22RA2Q969J5 263 aa12.41□□□□□ -0.42
TRIM39-209ENST00000428728 RABL2AQ9UBK7 228 aaPredicted RBP12.41□□□□□ -0.42
TRIM39-209ENST00000428728 SCP2D1Q9UJQ7 156 aa12.41□□□□□ -0.42
TRIM39-209ENST00000428728 RABL2BQ9UNT1 228 aa12.41□□□□□ -0.42
TRIM39-209ENST00000428728 KCNIP3Q9Y2W7 256 aa12.41□□□□□ -0.42
TRIM39-209ENST00000428728 GSTZ1O43708 216 aaPredicted RBP12.4□□□□□ -0.42
TRIM39-209ENST00000428728 TOMM40O96008 361 aa12.4□□□□□ -0.42
TRIM39-209ENST00000428728 RBMY1A1P0DJD3 496 aaKnown RBP12.4□□□□□ -0.42
TRIM39-209ENST00000428728 RBMY1CP0DJD4 496 aa12.4□□□□□ -0.42
TRIM39-209ENST00000428728 RBMY1FQ15415 496 aaKnown RBP12.4□□□□□ -0.42
TRIM39-209ENST00000428728 NMSQ5H8A3 153 aa12.4□□□□□ -0.42
TRIM39-209ENST00000428728 NOXA1Q86UR1 476 aa12.4□□□□□ -0.42
TRIM39-209ENST00000428728 DTD1Q8TEA8 209 aa12.4□□□□□ -0.42
TRIM39-209ENST00000428728 KMT2AQ03164 3969 aa12.4□□□□□ -0.42
TRIM39-209ENST00000428728 IGLL5B9A064 214 aa12.39□□□□□ -0.43
TRIM39-209ENST00000428728 FAM90A26D6RGX4 464 aa12.39□□□□□ -0.43
TRIM39-209ENST00000428728 RD3LP0DJH9 198 aa12.39□□□□□ -0.43
TRIM39-209ENST00000428728 MIFP14174 115 aa12.39□□□□□ -0.43
TRIM39-209ENST00000428728 SUPT4H1P63272 117 aaKnown RBP12.39□□□□□ -0.43
TRIM39-209ENST00000428728 SMCO1Q147U7 214 aa12.39□□□□□ -0.43
TRIM39-209ENST00000428728 SIGLEC15Q6ZMC9 328 aa12.39□□□□□ -0.43
TRIM39-209ENST00000428728 LYZL2Q7Z4W2 148 aa12.39□□□□□ -0.43
TRIM39-209ENST00000428728 RAB40CQ96S21 281 aa12.39□□□□□ -0.43
TRIM39-209ENST00000428728 RBKSQ9H477 322 aa12.39□□□□□ -0.43
TRIM39-209ENST00000428728 HSPB7Q9UBY9 170 aa12.39□□□□□ -0.43
TRIM39-209ENST00000428728 RSL24D1Q9UHA3 163 aaKnown RBP12.39□□□□□ -0.43
TRIM39-209ENST00000428728 A0A0B4J2A0 478 aa12.38□□□□□ -0.43
TRIM39-209ENST00000428728 ZNF705EA8MWA4 302 aaPredicted RBP12.38□□□□□ -0.43
TRIM39-209ENST00000428728 NOL3O60936 208 aaKnown RBP12.38□□□□□ -0.43
TRIM39-209ENST00000428728 PSG1P11464 419 aa12.38□□□□□ -0.43
TRIM39-209ENST00000428728 CCR6P51684 374 aa12.38□□□□□ -0.43
TRIM39-209ENST00000428728 AP2S1P53680 142 aaPredicted RBP12.38□□□□□ -0.43
TRIM39-209ENST00000428728 TMBIM6P55061 237 aa12.38□□□□□ -0.43
TRIM39-209ENST00000428728 SNRPD3P62318 126 aaKnown RBP12.38□□□□□ -0.43
TRIM39-209ENST00000428728 LGI3Q8N145 548 aa12.38□□□□□ -0.43
TRIM39-209ENST00000428728 OR51G1Q8NGK1 321 aa12.38□□□□□ -0.43
TRIM39-209ENST00000428728 SCGB3A2Q96PL1 93 aa12.38□□□□□ -0.43
TRIM39-209ENST00000428728 PBDC1Q9BVG4 233 aa12.38□□□□□ -0.43
TRIM39-209ENST00000428728 CACFD1Q9UGQ2 172 aa12.38□□□□□ -0.43
TRIM39-209ENST00000428728 SHPKQ9UHJ6 478 aa12.38□□□□□ -0.43
TRIM39-209ENST00000428728 TBC1D24Q9ULP9 559 aa12.38□□□□□ -0.43
TRIM39-209ENST00000428728 X6R8D5 127 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms