RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 IGHV3-49A0A0A0MS15 119 aa11.09□□□□□ -0.63
SGCE-204ENST00000428696 LGALS9O00182 355 aa11.09□□□□□ -0.63
SGCE-204ENST00000428696 CBLN1P23435 193 aa11.09□□□□□ -0.63
SGCE-204ENST00000428696 FCGR2BP31994 310 aaPredicted RBP11.09□□□□□ -0.63
SGCE-204ENST00000428696 H2BFSP57053 126 aa11.09□□□□□ -0.63
SGCE-204ENST00000428696 KRTAP10-11P60412 298 aa11.09□□□□□ -0.63
SGCE-204ENST00000428696 IL34Q6ZMJ4 242 aa11.09□□□□□ -0.63
SGCE-204ENST00000428696 REC114Q7Z4M0 266 aa11.09□□□□□ -0.63
SGCE-204ENST00000428696 OR10P1Q8NGE3 313 aa11.09□□□□□ -0.63
SGCE-204ENST00000428696 Q8WTZ3 238 aa11.09□□□□□ -0.63
SGCE-204ENST00000428696 WDR89Q96FK6 387 aaPredicted RBP11.09□□□□□ -0.63
SGCE-204ENST00000428696 ZNF436Q9C0F3 470 aaPredicted RBP11.09□□□□□ -0.63
SGCE-204ENST00000428696 PUS1Q9Y606 427 aaKnown RBP eCLIP11.09□□□□□ -0.63
SGCE-204ENST00000428696 FAM24AA6NFZ4 105 aa11.08□□□□□ -0.64
SGCE-204ENST00000428696 TSC22D2O75157 780 aa11.08□□□□□ -0.64
SGCE-204ENST00000428696 CCNKO75909 580 aa11.08□□□□□ -0.64
SGCE-204ENST00000428696 TAS2R30P59541 319 aa11.08□□□□□ -0.64
SGCE-204ENST00000428696 AKR1C1Q04828 323 aa11.08□□□□□ -0.64
SGCE-204ENST00000428696 OXA1LQ15070 435 aa11.08□□□□□ -0.64
SGCE-204ENST00000428696 TOMM20LQ6UXN7 152 aa11.08□□□□□ -0.64
SGCE-204ENST00000428696 ZNF600Q6ZNG1 722 aa11.08□□□□□ -0.64
SGCE-204ENST00000428696 NMES1Q9C002 83 aa11.08□□□□□ -0.64
SGCE-204ENST00000428696 ZMAT5Q9UDW3 170 aaKnown RBP11.08□□□□□ -0.64
SGCE-204ENST00000428696 FBN3Q75N90 2809 aa11.08□□□□□ -0.64
SGCE-204ENST00000428696 IGHV3OR16-13A0A075B7E8 117 aa11.07□□□□□ -0.64
SGCE-204ENST00000428696 IGHV3-74A0A0B4J1X5 117 aa11.07□□□□□ -0.64
SGCE-204ENST00000428696 CST7O76096 145 aa11.07□□□□□ -0.64
SGCE-204ENST00000428696 RD3LP0DJH9 198 aa11.07□□□□□ -0.64
SGCE-204ENST00000428696 FCN2Q15485 313 aa11.07□□□□□ -0.64
SGCE-204ENST00000428696 TMEM217Q8N7C4 229 aa11.07□□□□□ -0.64
SGCE-204ENST00000428696 TMEM116Q8NCL8 245 aa11.07□□□□□ -0.64
SGCE-204ENST00000428696 OR1S2Q8NGQ3 325 aa11.07□□□□□ -0.64
SGCE-204ENST00000428696 TMEM190Q8WZ59 177 aa11.07□□□□□ -0.64
SGCE-204ENST00000428696 DAZ1Q9NQZ3 744 aaKnown RBP11.07□□□□□ -0.64
SGCE-204ENST00000428696 TRAV14DV4A0A0A6YYC5 116 aa11.06□□□□□ -0.64
SGCE-204ENST00000428696 IGHV3-66A0A0C4DH42 116 aa11.06□□□□□ -0.64
SGCE-204ENST00000428696 TMEM213A2RRL7 107 aa11.06□□□□□ -0.64
SGCE-204ENST00000428696 IGKV1-17P01599 117 aa11.06□□□□□ -0.64
SGCE-204ENST00000428696 IGLC1P0CG04 106 aa11.06□□□□□ -0.64
SGCE-204ENST00000428696 CXCL3P19876 107 aa11.06□□□□□ -0.64
SGCE-204ENST00000428696 IL15RAQ13261 267 aa11.06□□□□□ -0.64
SGCE-204ENST00000428696 OR2F1Q13607 317 aa11.06□□□□□ -0.64
SGCE-204ENST00000428696 GUCA2BQ16661 112 aa11.06□□□□□ -0.64
SGCE-204ENST00000428696 DEFB121Q5J5C9 76 aa11.06□□□□□ -0.64
SGCE-204ENST00000428696 TMEM14EPQ6UXP3 125 aa11.06□□□□□ -0.64
SGCE-204ENST00000428696 ACOT7LQ6ZUV0 252 aa11.06□□□□□ -0.64
SGCE-204ENST00000428696 PPP1R1CQ8WVI7 109 aa11.06□□□□□ -0.64
SGCE-204ENST00000428696 PRR25Q96S07 402 aa11.06□□□□□ -0.64
SGCE-204ENST00000428696 DEDDO75618 318 aa11.05□□□□□ -0.64
SGCE-204ENST00000428696 ZNF90Q03938 601 aa11.05□□□□□ -0.64
SGCE-204ENST00000428696 CD300EQ496F6 205 aaPredicted RBP11.05□□□□□ -0.64
SGCE-204ENST00000428696 BTNL8Q6UX41 500 aa11.05□□□□□ -0.64
SGCE-204ENST00000428696 ADAMTSL5Q6ZMM2 481 aa11.05□□□□□ -0.64
SGCE-204ENST00000428696 GINS3Q9BRX5 216 aa11.05□□□□□ -0.64
SGCE-204ENST00000428696 PBDC1Q9BVG4 233 aa11.05□□□□□ -0.64
SGCE-204ENST00000428696 OR5AC2Q9NZP5 309 aa11.05□□□□□ -0.64
SGCE-204ENST00000428696 MRPL27Q9P0M9 148 aaKnown RBP11.05□□□□□ -0.64
SGCE-204ENST00000428696 E5RGE8 158 aa11.04□□□□□ -0.64
SGCE-204ENST00000428696 IGLV1-51P01701 117 aa11.04□□□□□ -0.64
SGCE-204ENST00000428696 FABP1P07148 127 aa11.04□□□□□ -0.64
SGCE-204ENST00000428696 NPPCP23582 126 aa11.04□□□□□ -0.64
SGCE-204ENST00000428696 ELLP55199 621 aaPredicted RBP11.04□□□□□ -0.64
SGCE-204ENST00000428696 DEFB114Q30KQ6 69 aa11.04□□□□□ -0.64
SGCE-204ENST00000428696 KPRPQ5T749 579 aaPredicted RBP11.04□□□□□ -0.64
SGCE-204ENST00000428696 RBPMS2Q6ZRY4 209 aaKnown RBP11.04□□□□□ -0.64
SGCE-204ENST00000428696 STX12Q86Y82 276 aa11.04□□□□□ -0.64
SGCE-204ENST00000428696 OR11H7Q8NGC8 314 aa11.04□□□□□ -0.64
SGCE-204ENST00000428696 MARC2Q969Z3 335 aa11.04□□□□□ -0.64
SGCE-204ENST00000428696 AURKAIP1Q9NWT8 199 aaPredicted RBP11.04□□□□□ -0.64
SGCE-204ENST00000428696 ZNF256Q9Y2P7 627 aaPredicted RBP11.04□□□□□ -0.64
SGCE-204ENST00000428696 IGKV3-7A0A075B6H7 116 aa11.03□□□□□ -0.64
SGCE-204ENST00000428696 IZUMO1RA6ND01 250 aa11.03□□□□□ -0.64
SGCE-204ENST00000428696 A8MWP6 167 aa11.03□□□□□ -0.64
SGCE-204ENST00000428696 K7EMT4 169 aa11.03□□□□□ -0.64
SGCE-204ENST00000428696 SCAF4O95104 1147 aaKnown RBP11.03□□□□□ -0.64
SGCE-204ENST00000428696 IL4P05112 153 aa11.03□□□□□ -0.64
SGCE-204ENST00000428696 PSG1P11464 419 aa11.03□□□□□ -0.64
SGCE-204ENST00000428696 YPEL3P61236 119 aaPredicted RBP11.03□□□□□ -0.64
SGCE-204ENST00000428696 RPL11P62913 178 aaKnown RBP11.03□□□□□ -0.64
SGCE-204ENST00000428696 SLC38A11Q08AI6 406 aa11.03□□□□□ -0.64
SGCE-204ENST00000428696 EGFEM1PQ0D2K5 195 aa11.03□□□□□ -0.64
SGCE-204ENST00000428696 ARL16Q0P5N6 197 aa11.03□□□□□ -0.64
SGCE-204ENST00000428696 LCN12Q6JVE5 192 aa11.03□□□□□ -0.64
SGCE-204ENST00000428696 LILRB2Q8N423 598 aa11.03□□□□□ -0.64
SGCE-204ENST00000428696 NARS2Q96I59 477 aaKnown RBP11.03□□□□□ -0.64
SGCE-204ENST00000428696 METTL26Q96S19 204 aa11.03□□□□□ -0.64
SGCE-204ENST00000428696 SIGLEC8Q9NYZ4 499 aa11.03□□□□□ -0.64
SGCE-204ENST00000428696 TECRQ9NZ01 308 aaKnown RBP11.03□□□□□ -0.64
SGCE-204ENST00000428696 MLXQ9UH92 298 aa11.03□□□□□ -0.64
SGCE-204ENST00000428696 IGHV7-4-1A0A0J9YVY3 117 aa11.02□□□□□ -0.64
SGCE-204ENST00000428696 WI2-2373I1.2A0A1W2PRP0 233 aa11.02□□□□□ -0.64
SGCE-204ENST00000428696 IGSF23A1L1A6 192 aa11.02□□□□□ -0.64
SGCE-204ENST00000428696 PMS2P5A8MQ11 134 aa11.02□□□□□ -0.64
SGCE-204ENST00000428696 PRSS46E5RG02 174 aa11.02□□□□□ -0.64
SGCE-204ENST00000428696 PET100P0DJ07 73 aa11.02□□□□□ -0.64
SGCE-204ENST00000428696 GP9P14770 177 aa11.02□□□□□ -0.64
SGCE-204ENST00000428696 DLK1P80370 383 aa11.02□□□□□ -0.64
SGCE-204ENST00000428696 TMEM252Q8N6L7 170 aa11.02□□□□□ -0.64
SGCE-204ENST00000428696 OR51G1Q8NGK1 321 aa11.02□□□□□ -0.64
SGCE-204ENST00000428696 THAP6Q8TBB0 222 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms