RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 FAM209BQ5JX69 171 aa6.13□□□□□ -1.43
HMGA1P4-201ENST00000428643 LAMTOR1Q6IAA8 161 aa6.13□□□□□ -1.43
HMGA1P4-201ENST00000428643 ZNF343Q6P1L6 599 aa6.13□□□□□ -1.43
HMGA1P4-201ENST00000428643 BTNL8Q6UX41 500 aa6.13□□□□□ -1.43
HMGA1P4-201ENST00000428643 TREML4Q6UXN2 200 aa6.13□□□□□ -1.43
HMGA1P4-201ENST00000428643 C18orf65Q6ZTR6 163 aa6.13□□□□□ -1.43
HMGA1P4-201ENST00000428643 ZNF491Q8N8L2 437 aa6.13□□□□□ -1.43
HMGA1P4-201ENST00000428643 HSD17B11Q8NBQ5 300 aa6.13□□□□□ -1.43
HMGA1P4-201ENST00000428643 TMEM116Q8NCL8 245 aa6.13□□□□□ -1.43
HMGA1P4-201ENST00000428643 OR4X1Q8NH49 305 aa6.13□□□□□ -1.43
HMGA1P4-201ENST00000428643 C4orf3Q8WVX3 66 aa6.13□□□□□ -1.43
HMGA1P4-201ENST00000428643 TXN2Q99757 166 aa6.13□□□□□ -1.43
HMGA1P4-201ENST00000428643 ZNF471Q9BX82 626 aaPredicted RBP6.13□□□□□ -1.43
HMGA1P4-201ENST00000428643 WFDC1Q9HC57 220 aa6.13□□□□□ -1.43
HMGA1P4-201ENST00000428643 WDR83OSQ9Y284 106 aa6.13□□□□□ -1.43
HMGA1P4-201ENST00000428643 TSSC4Q9Y5U2 329 aaPredicted RBP6.13□□□□□ -1.43
HMGA1P4-201ENST00000428643 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.12□□□□□ -1.43
HMGA1P4-201ENST00000428643 COL6A5A8TX70 2615 aa6.12□□□□□ -1.43
HMGA1P4-201ENST00000428643 F8W735 103 aaPredicted RBP6.12□□□□□ -1.43
HMGA1P4-201ENST00000428643 PLXNB1O43157 2135 aa6.12□□□□□ -1.43
HMGA1P4-201ENST00000428643 TGOLN2O43493 480 aa6.12□□□□□ -1.43
HMGA1P4-201ENST00000428643 MPDU1O75352 247 aa6.12□□□□□ -1.43
HMGA1P4-201ENST00000428643 TRBV12-3P01733 135 aa6.12□□□□□ -1.43
HMGA1P4-201ENST00000428643 CLEC3BP05452 202 aa6.12□□□□□ -1.43
HMGA1P4-201ENST00000428643 IGLC1P0CG04 106 aa6.12□□□□□ -1.43
HMGA1P4-201ENST00000428643 CDX1P47902 265 aaPredicted RBP6.12□□□□□ -1.43
HMGA1P4-201ENST00000428643 KRTAP10-3P60369 221 aa6.12□□□□□ -1.43
HMGA1P4-201ENST00000428643 RAB31Q13636 194 aa6.12□□□□□ -1.43
HMGA1P4-201ENST00000428643 KIAA0141Q14154 515 aaPredicted RBP6.12□□□□□ -1.43
HMGA1P4-201ENST00000428643 OPCMLQ14982 345 aa6.12□□□□□ -1.43
HMGA1P4-201ENST00000428643 DEFB136Q30KP8 78 aa6.12□□□□□ -1.43
HMGA1P4-201ENST00000428643 NSUN5P1Q3KNT7 163 aa6.12□□□□□ -1.43
HMGA1P4-201ENST00000428643 TIGITQ495A1 244 aa6.12□□□□□ -1.43
HMGA1P4-201ENST00000428643 RPL7L1Q6DKI1 246 aaKnown RBP6.12□□□□□ -1.43
HMGA1P4-201ENST00000428643 TEPPQ6URK8 271 aa6.12□□□□□ -1.43
HMGA1P4-201ENST00000428643 C8orf86Q6ZUL3 223 aa6.12□□□□□ -1.43
HMGA1P4-201ENST00000428643 TMEM144Q7Z5S9 345 aa6.12□□□□□ -1.43
HMGA1P4-201ENST00000428643 ZNF709Q8N972 641 aa6.12□□□□□ -1.43
HMGA1P4-201ENST00000428643 MGST2Q99735 147 aa6.12□□□□□ -1.43
HMGA1P4-201ENST00000428643 WDR61Q9GZS3 305 aaKnown RBP6.12□□□□□ -1.43
HMGA1P4-201ENST00000428643 NPVFQ9HCQ7 196 aa6.12□□□□□ -1.43
HMGA1P4-201ENST00000428643 KCNIP2Q9NS61 270 aa6.12□□□□□ -1.43
HMGA1P4-201ENST00000428643 PEF1Q9UBV8 284 aaKnown RBP6.12□□□□□ -1.43
HMGA1P4-201ENST00000428643 BOLA1Q9Y3E2 137 aa6.12□□□□□ -1.43
HMGA1P4-201ENST00000428643 TET2Q6N021 2002 aaPredicted RBP6.11□□□□□ -1.43
HMGA1P4-201ENST00000428643 IGHV4OR15-8A0A075B7B6 117 aa6.11□□□□□ -1.43
HMGA1P4-201ENST00000428643 IGKV1OR2-108A0A075B7D4 117 aa6.11□□□□□ -1.43
HMGA1P4-201ENST00000428643 TRAV30A0A087WSZ9 112 aa6.11□□□□□ -1.43
HMGA1P4-201ENST00000428643 A0A087WW49 117 aa6.11□□□□□ -1.43
HMGA1P4-201ENST00000428643 IGHV3-35A0A0C4DH35 117 aa6.11□□□□□ -1.43
HMGA1P4-201ENST00000428643 C17orf112F2Z3M2 114 aa6.11□□□□□ -1.43
HMGA1P4-201ENST00000428643 BMPR1BO00238 502 aa6.11□□□□□ -1.43
HMGA1P4-201ENST00000428643 AGPAT2O15120 278 aa6.11□□□□□ -1.43
HMGA1P4-201ENST00000428643 JTBO76095 146 aa6.11□□□□□ -1.43
HMGA1P4-201ENST00000428643 YIF1AO95070 293 aa6.11□□□□□ -1.43
HMGA1P4-201ENST00000428643 IGKV1-17P01599 117 aa6.11□□□□□ -1.43
HMGA1P4-201ENST00000428643 TPT1P13693 172 aaKnown RBP6.11□□□□□ -1.43
HMGA1P4-201ENST00000428643 FCGR2BP31994 310 aaPredicted RBP6.11□□□□□ -1.43
HMGA1P4-201ENST00000428643 CAMLGP49069 296 aa6.11□□□□□ -1.43
HMGA1P4-201ENST00000428643 EIF5AP63241 154 aaKnown RBP6.11□□□□□ -1.43
HMGA1P4-201ENST00000428643 RUNX1Q01196 453 aa6.11□□□□□ -1.43
HMGA1P4-201ENST00000428643 ZNF90Q03938 601 aa6.11□□□□□ -1.43
HMGA1P4-201ENST00000428643 RELQ04864 619 aaPredicted RBP6.11□□□□□ -1.43
HMGA1P4-201ENST00000428643 SPSB3Q6PJ21 355 aa6.11□□□□□ -1.43
HMGA1P4-201ENST00000428643 C12orf54Q6X4T0 127 aa6.11□□□□□ -1.43
HMGA1P4-201ENST00000428643 CYP2G1PQ6ZSU1 146 aa6.11□□□□□ -1.43
HMGA1P4-201ENST00000428643 NDUFA11Q86Y39 141 aa6.11□□□□□ -1.43
HMGA1P4-201ENST00000428643 C3orf56Q8N813 242 aa6.11□□□□□ -1.43
HMGA1P4-201ENST00000428643 THAP8Q8NA92 274 aa6.11□□□□□ -1.43
HMGA1P4-201ENST00000428643 DPF1Q92782 380 aa6.11□□□□□ -1.43
HMGA1P4-201ENST00000428643 ATP6V0BQ99437 205 aa6.11□□□□□ -1.43
HMGA1P4-201ENST00000428643 TRGV9Q99603 122 aa6.11□□□□□ -1.43
HMGA1P4-201ENST00000428643 RSG1Q9BU20 258 aa6.11□□□□□ -1.43
HMGA1P4-201ENST00000428643 CHRDL1Q9BU40 450 aa6.11□□□□□ -1.43
HMGA1P4-201ENST00000428643 GGTLC1Q9BX51 225 aa6.11□□□□□ -1.43
HMGA1P4-201ENST00000428643 NPCDR1Q9BY65 106 aa6.11□□□□□ -1.43
HMGA1P4-201ENST00000428643 CYTL1Q9NRR1 136 aa6.11□□□□□ -1.43
HMGA1P4-201ENST00000428643 PLA2G2EQ9NZK7 142 aa6.11□□□□□ -1.43
HMGA1P4-201ENST00000428643 LSM4Q9Y4Z0 139 aaKnown RBP6.11□□□□□ -1.43
HMGA1P4-201ENST00000428643 FBN1P35555 2871 aaKnown RBP6.11□□□□□ -1.43
HMGA1P4-201ENST00000428643 IGKV1D-37A0A075B6S9 117 aa6.1□□□□□ -1.43
HMGA1P4-201ENST00000428643 I3L521 148 aa6.1□□□□□ -1.43
HMGA1P4-201ENST00000428643 GGCTO75223 188 aaKnown RBP6.1□□□□□ -1.43
HMGA1P4-201ENST00000428643 OR2C1O95371 312 aa6.1□□□□□ -1.43
HMGA1P4-201ENST00000428643 TOMM40O96008 361 aa6.1□□□□□ -1.43
HMGA1P4-201ENST00000428643 CTSGP08311 255 aa6.1□□□□□ -1.43
HMGA1P4-201ENST00000428643 LINC00869P0C866 280 aa6.1□□□□□ -1.43
HMGA1P4-201ENST00000428643 RD3LP0DJH9 198 aa6.1□□□□□ -1.43
HMGA1P4-201ENST00000428643 ZP3P21754 424 aa6.1□□□□□ -1.43
HMGA1P4-201ENST00000428643 ATP6V0CP27449 155 aa6.1□□□□□ -1.43
HMGA1P4-201ENST00000428643 ADMP35318 185 aa6.1□□□□□ -1.43
HMGA1P4-201ENST00000428643 ELLP55199 621 aaPredicted RBP6.1□□□□□ -1.43
HMGA1P4-201ENST00000428643 LYZP61626 148 aa6.1□□□□□ -1.43
HMGA1P4-201ENST00000428643 ZNF616Q08AN1 781 aa6.1□□□□□ -1.43
HMGA1P4-201ENST00000428643 RPEL1Q2QD12 228 aa6.1□□□□□ -1.43
HMGA1P4-201ENST00000428643 ZNF600Q6ZNG1 722 aa6.1□□□□□ -1.43
HMGA1P4-201ENST00000428643 SLC51BQ86UW2 128 aa6.1□□□□□ -1.43
HMGA1P4-201ENST00000428643 BPIFCQ8NFQ6 507 aa6.1□□□□□ -1.43
HMGA1P4-201ENST00000428643 OR1N2Q8NGR9 330 aa6.1□□□□□ -1.43
HMGA1P4-201ENST00000428643 GNPNAT1Q96EK6 184 aaPredicted RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms