RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 TMEM231Q9H6L2 316 aa11.27□□□□□ -0.61
SEC13-210ENST00000428626 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.27□□□□□ -0.61
SEC13-210ENST00000428626 A0A1W2PS18 150 aa11.26□□□□□ -0.61
SEC13-210ENST00000428626 CRYM-AS1A6NIL9 109 aa11.26□□□□□ -0.61
SEC13-210ENST00000428626 RGS5O15539 181 aa11.26□□□□□ -0.61
SEC13-210ENST00000428626 B3GALNT1O75752 331 aa11.26□□□□□ -0.61
SEC13-210ENST00000428626 SSBP1Q04837 148 aaKnown RBP11.26□□□□□ -0.61
SEC13-210ENST00000428626 USF2Q15853 346 aaPredicted RBP11.26□□□□□ -0.61
SEC13-210ENST00000428626 TMEM268Q5VZI3 342 aa11.26□□□□□ -0.61
SEC13-210ENST00000428626 STHQ8IWL8 128 aa11.26□□□□□ -0.61
SEC13-210ENST00000428626 C15orf40Q8WUR7 153 aa11.26□□□□□ -0.61
SEC13-210ENST00000428626 GLMPQ8WWB7 406 aa11.26□□□□□ -0.61
SEC13-210ENST00000428626 GRAMD2BQ96HH9 432 aa11.26□□□□□ -0.61
SEC13-210ENST00000428626 HEYLQ9NQ87 328 aaPredicted RBP11.26□□□□□ -0.61
SEC13-210ENST00000428626 C14orf166Q9Y224 244 aaKnown RBP11.26□□□□□ -0.61
SEC13-210ENST00000428626 X6R8D5 127 aa11.26□□□□□ -0.61
SEC13-210ENST00000428626 HERC2O95714 4834 aa11.26□□□□□ -0.61
SEC13-210ENST00000428626 IGHV4-28A0A0C4DH34 117 aa11.25□□□□□ -0.61
SEC13-210ENST00000428626 HTR2BP41595 481 aa11.25□□□□□ -0.61
SEC13-210ENST00000428626 DHODHQ02127 395 aa11.25□□□□□ -0.61
SEC13-210ENST00000428626 SURF2Q15527 256 aaPredicted RBP11.25□□□□□ -0.61
SEC13-210ENST00000428626 C16orf54Q6UWD8 224 aa11.25□□□□□ -0.61
SEC13-210ENST00000428626 CSNK1G2-AS1Q8NCQ2 148 aa11.25□□□□□ -0.61
SEC13-210ENST00000428626 SLC24A4Q8NFF2 622 aa11.25□□□□□ -0.61
SEC13-210ENST00000428626 OR51S1Q8NGJ8 323 aa11.25□□□□□ -0.61
SEC13-210ENST00000428626 MFFQ9GZY8 342 aa11.25□□□□□ -0.61
SEC13-210ENST00000428626 CLEC5AQ9NY25 188 aa11.25□□□□□ -0.61
SEC13-210ENST00000428626 TMEM56-RWDD3S4R434 201 aa11.25□□□□□ -0.61
SEC13-210ENST00000428626 HECTD4Q9Y4D8 3996 aa11.25□□□□□ -0.61
SEC13-210ENST00000428626 TRAV30A0A087WSZ9 112 aa11.24□□□□□ -0.61
SEC13-210ENST00000428626 ELOA3CA0A087WX78 387 aaPredicted RBP11.24□□□□□ -0.61
SEC13-210ENST00000428626 OR10J1P30954 320 aa11.24□□□□□ -0.61
SEC13-210ENST00000428626 YPEL3P61236 119 aaPredicted RBP11.24□□□□□ -0.61
SEC13-210ENST00000428626 ACTL10Q5JWF8 245 aa11.24□□□□□ -0.61
SEC13-210ENST00000428626 OR1S2Q8NGQ3 325 aa11.24□□□□□ -0.61
SEC13-210ENST00000428626 APLNQ9ULZ1 77 aa11.24□□□□□ -0.61
SEC13-210ENST00000428626 RPS10-NUDT3A0A1W2PQS6 291 aa11.23□□□□□ -0.61
SEC13-210ENST00000428626 CEBPZOSA8MTT3 80 aa11.23□□□□□ -0.61
SEC13-210ENST00000428626 ZNF705EA8MWA4 302 aaPredicted RBP11.23□□□□□ -0.61
SEC13-210ENST00000428626 DISC1C4P0D8 188 aa11.23□□□□□ -0.61
SEC13-210ENST00000428626 CTDSPLO15194 276 aa11.23□□□□□ -0.61
SEC13-210ENST00000428626 IFNA4P05014 189 aa11.23□□□□□ -0.61
SEC13-210ENST00000428626 HNRNPCP07910 306 aaKnown RBP eCLIP11.23□□□□□ -0.61
SEC13-210ENST00000428626 AKAIN1P0CW23 69 aa11.23□□□□□ -0.61
SEC13-210ENST00000428626 MRPS10P82664 201 aaKnown RBP11.23□□□□□ -0.61
SEC13-210ENST00000428626 DHRS2Q13268 280 aa11.23□□□□□ -0.61
SEC13-210ENST00000428626 NMSQ5H8A3 153 aa11.23□□□□□ -0.61
SEC13-210ENST00000428626 DYNC2LI1Q8TCX1 351 aa11.23□□□□□ -0.61
SEC13-210ENST00000428626 RNASEH2CQ8TDP1 164 aaKnown RBP11.23□□□□□ -0.61
SEC13-210ENST00000428626 C2CD4CQ8TF44 421 aa11.23□□□□□ -0.61
SEC13-210ENST00000428626 NPIPB3Q92617 1050 aa11.23□□□□□ -0.61
SEC13-210ENST00000428626 RAB40CQ96S21 281 aa11.23□□□□□ -0.61
SEC13-210ENST00000428626 MRPS26Q9BYN8 205 aaKnown RBP11.23□□□□□ -0.61
SEC13-210ENST00000428626 ANKRD20A5PA0PJZ0 165 aa11.22□□□□□ -0.61
SEC13-210ENST00000428626 IL4P05112 153 aa11.22□□□□□ -0.61
SEC13-210ENST00000428626 SPP1P10451 314 aa11.22□□□□□ -0.61
SEC13-210ENST00000428626 SLC25A4P12235 298 aa11.22□□□□□ -0.61
SEC13-210ENST00000428626 NPY1RP25929 384 aa11.22□□□□□ -0.61
SEC13-210ENST00000428626 SUPT4H1P63272 117 aaKnown RBP11.22□□□□□ -0.61
SEC13-210ENST00000428626 IL18Q14116 193 aa11.22□□□□□ -0.61
SEC13-210ENST00000428626 PSMG4Q5JS54 123 aa11.22□□□□□ -0.61
SEC13-210ENST00000428626 GPR141Q7Z602 305 aa11.22□□□□□ -0.61
SEC13-210ENST00000428626 Q8WTZ3 238 aa11.22□□□□□ -0.61
SEC13-210ENST00000428626 DIRAS2Q96HU8 199 aa11.22□□□□□ -0.61
SEC13-210ENST00000428626 HRH4Q9H3N8 390 aa11.22□□□□□ -0.61
SEC13-210ENST00000428626 IGLL5B9A064 214 aa11.21□□□□□ -0.61
SEC13-210ENST00000428626 FAM90A26D6RGX4 464 aa11.21□□□□□ -0.61
SEC13-210ENST00000428626 BUB3O43684 328 aa11.21□□□□□ -0.61
SEC13-210ENST00000428626 HLA-DMBP28068 263 aa11.21□□□□□ -0.61
SEC13-210ENST00000428626 MORN3Q6PF18 240 aaPredicted RBP11.21□□□□□ -0.61
SEC13-210ENST00000428626 GSG1LQ6UXU4 331 aa11.21□□□□□ -0.61
SEC13-210ENST00000428626 Q6ZTC4 211 aa11.21□□□□□ -0.61
SEC13-210ENST00000428626 CLVS1Q8IUQ0 354 aaPredicted RBP11.21□□□□□ -0.61
SEC13-210ENST00000428626 ACY3Q96HD9 319 aa11.21□□□□□ -0.61
SEC13-210ENST00000428626 KRTAP17-1Q9BYP8 105 aa11.21□□□□□ -0.61
SEC13-210ENST00000428626 CELA1Q9UNI1 258 aa11.21□□□□□ -0.61
SEC13-210ENST00000428626 HELTA6NFD8 242 aa11.2□□□□□ -0.62
SEC13-210ENST00000428626 GSTZ1O43708 216 aaPredicted RBP11.2□□□□□ -0.62
SEC13-210ENST00000428626 SCGB2A1O75556 95 aa11.2□□□□□ -0.62
SEC13-210ENST00000428626 TOMM40O96008 361 aa11.2□□□□□ -0.62
SEC13-210ENST00000428626 SULT1A3P0DMM9 295 aa11.2□□□□□ -0.62
SEC13-210ENST00000428626 SULT1A4P0DMN0 295 aa11.2□□□□□ -0.62
SEC13-210ENST00000428626 MIFP14174 115 aa11.2□□□□□ -0.62
SEC13-210ENST00000428626 DEFB1P60022 68 aa11.2□□□□□ -0.62
SEC13-210ENST00000428626 LYZL2Q7Z4W2 148 aa11.2□□□□□ -0.62
SEC13-210ENST00000428626 IL22RA2Q969J5 263 aa11.2□□□□□ -0.62
SEC13-210ENST00000428626 NARS2Q96I59 477 aaKnown RBP11.2□□□□□ -0.62
SEC13-210ENST00000428626 PRRT1Q99946 306 aa11.2□□□□□ -0.62
SEC13-210ENST00000428626 SOSTQ9BQB4 213 aa11.2□□□□□ -0.62
SEC13-210ENST00000428626 CCDC59Q9P031 241 aaKnown RBP11.2□□□□□ -0.62
SEC13-210ENST00000428626 HSPB7Q9UBY9 170 aa11.2□□□□□ -0.62
SEC13-210ENST00000428626 IGKV1D-37A0A075B6S9 117 aa11.19□□□□□ -0.62
SEC13-210ENST00000428626 RD3LP0DJH9 198 aa11.19□□□□□ -0.62
SEC13-210ENST00000428626 PSG1P11464 419 aa11.19□□□□□ -0.62
SEC13-210ENST00000428626 TMEM41BQ5BJD5 291 aa11.19□□□□□ -0.62
SEC13-210ENST00000428626 OR51G1Q8NGK1 321 aa11.19□□□□□ -0.62
SEC13-210ENST00000428626 SCRT1Q9BWW7 348 aa11.19□□□□□ -0.62
SEC13-210ENST00000428626 SLIRPQ9GZT3 109 aaKnown RBP11.19□□□□□ -0.62
SEC13-210ENST00000428626 RBKSQ9H477 322 aa11.19□□□□□ -0.62
SEC13-210ENST00000428626 TBC1D24Q9ULP9 559 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms