RNA–Protein interactions for RNA: ENST00000428128.1

RGPD1-203, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

TSL 1 (best)

Gene RGPD1, Length 3,479 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-203ENST00000428128 TCTEX1D1Q8N7M0 179 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 PBDC1Q9BVG4 233 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 TMEM147Q9BVK8 224 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 GABARAPL3Q9BY60 117 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 OCR1Q9BZK8 76 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 EFCAB1Q9HAE3 211 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 LSM2Q9Y333 95 aaKnown RBP2.29□□□□□ -2.04
RGPD1-203ENST00000428128 AMMECR1Q9Y4X0 333 aaPredicted RBP2.29□□□□□ -2.04
RGPD1-203ENST00000428128 ARHGAP21Q5T5U3 1957 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 IGLV5-39A0A0G2JS06 123 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 LOC389332A0A1B0GUA5 103 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 RBMY1BA6NDE4 496 aaKnown RBP2.29□□□□□ -2.04
RGPD1-203ENST00000428128 RBMY1EA6NEQ0 496 aaKnown RBP2.29□□□□□ -2.04
RGPD1-203ENST00000428128 A8MXK9 166 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 K7EQS6 105 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 GNG7O60262 68 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 RBMY1DP0C7P1 496 aaKnown RBP2.29□□□□□ -2.04
RGPD1-203ENST00000428128 RBMY1A1P0DJD3 496 aaKnown RBP2.29□□□□□ -2.04
RGPD1-203ENST00000428128 HMGA1P17096 107 aaKnown RBP2.29□□□□□ -2.04
RGPD1-203ENST00000428128 TAS2R19P59542 299 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 UBE2NP61088 152 aaKnown RBP2.29□□□□□ -2.04
RGPD1-203ENST00000428128 COPZ1P61923 177 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 CYCSP99999 105 aaKnown RBP2.29□□□□□ -2.04
RGPD1-203ENST00000428128 ZNF79Q15937 498 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 ADAMTSL4-AS1Q5T5F5 129 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 Q6Q795 121 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 GLIPR1L1Q6UWM5 242 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 PHF5AQ7RTV0 110 aaKnown RBP2.29□□□□□ -2.04
RGPD1-203ENST00000428128 FAM19A3Q7Z5A8 133 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 LRP11Q86VZ4 500 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 OR2G3Q8NGZ4 309 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 ZNF519Q8TB69 540 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 LCN9Q8WX39 176 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 GNPNAT1Q96EK6 184 aaPredicted RBP2.29□□□□□ -2.04
RGPD1-203ENST00000428128 SLC25A44Q96H78 314 aaPredicted RBP2.29□□□□□ -2.04
RGPD1-203ENST00000428128 TEX37Q96LM6 180 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 IP6K3Q96PC2 410 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 TRIB3Q96RU7 358 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 NKX6-2Q9C056 277 aaPredicted RBP2.29□□□□□ -2.04
RGPD1-203ENST00000428128 AICDAQ9GZX7 198 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 SPAG17Q6Q759 2223 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 USP9YO00507 2555 aaPredicted RBP2.28□□□□□ -2.04
RGPD1-203ENST00000428128 A0A1B0GVT2 93 aa2.28□□□□□ -2.04
RGPD1-203ENST00000428128 UCHL1P09936 223 aa2.28□□□□□ -2.04
RGPD1-203ENST00000428128 HOXA5P20719 270 aa2.28□□□□□ -2.04
RGPD1-203ENST00000428128 GNG4P50150 75 aa2.28□□□□□ -2.04
RGPD1-203ENST00000428128 MP68P56378 58 aa2.28□□□□□ -2.04
RGPD1-203ENST00000428128 HERVK_113P61574 105 aa2.28□□□□□ -2.04
RGPD1-203ENST00000428128 DCDP81605 110 aaKnown RBP2.28□□□□□ -2.04
RGPD1-203ENST00000428128 LPAL2Q16609 132 aa2.28□□□□□ -2.04
RGPD1-203ENST00000428128 SPANXN3Q5MJ09 141 aa2.28□□□□□ -2.04
RGPD1-203ENST00000428128 C10orf91Q5T1B1 145 aa2.28□□□□□ -2.04
RGPD1-203ENST00000428128 LCE5AQ5TCM9 118 aa2.28□□□□□ -2.04
RGPD1-203ENST00000428128 LYPD2Q6UXB3 125 aa2.28□□□□□ -2.04
RGPD1-203ENST00000428128 KTN1-AS1Q86SY8 53 aa2.28□□□□□ -2.04
RGPD1-203ENST00000428128 FNDC9Q8TBE3 224 aa2.28□□□□□ -2.04
RGPD1-203ENST00000428128 MS4A6EQ96DS6 147 aa2.28□□□□□ -2.04
RGPD1-203ENST00000428128 LPAR5Q9H1C0 372 aa2.28□□□□□ -2.04
RGPD1-203ENST00000428128 NAT8Q9UHE5 227 aa2.28□□□□□ -2.04
RGPD1-203ENST00000428128 PCYT1BQ9Y5K3 369 aaPredicted RBP2.28□□□□□ -2.04
RGPD1-203ENST00000428128 HIVEP3Q5T1R4 2406 aa2.28□□□□□ -2.04
RGPD1-203ENST00000428128 A0A1B0GW54 56 aa2.28□□□□□ -2.04
RGPD1-203ENST00000428128 FGF12P61328 243 aa2.28□□□□□ -2.04
RGPD1-203ENST00000428128 CLLU1Q5K131 121 aa2.28□□□□□ -2.04
RGPD1-203ENST00000428128 MRPL2Q5T653 305 aaKnown RBP2.28□□□□□ -2.04
RGPD1-203ENST00000428128 NXNL2Q5VZ03 156 aa2.28□□□□□ -2.04
RGPD1-203ENST00000428128 IGFL3Q6UXB1 125 aa2.28□□□□□ -2.04
RGPD1-203ENST00000428128 CTAGE3PQ8IX95 158 aa2.28□□□□□ -2.04
RGPD1-203ENST00000428128 OR2M3Q8NG83 312 aa2.28□□□□□ -2.04
RGPD1-203ENST00000428128 OR11H7Q8NGC8 314 aa2.28□□□□□ -2.04
RGPD1-203ENST00000428128 TMEM158Q8WZ71 300 aa2.28□□□□□ -2.04
RGPD1-203ENST00000428128 TP53RKQ96S44 253 aa2.28□□□□□ -2.04
RGPD1-203ENST00000428128 CCL13Q99616 98 aa2.28□□□□□ -2.04
RGPD1-203ENST00000428128 ULBP3Q9BZM4 244 aa2.28□□□□□ -2.04
RGPD1-203ENST00000428128 DPM3Q9P2X0 92 aa2.28□□□□□ -2.04
RGPD1-203ENST00000428128 C7orf66A4D0T2 115 aa2.27□□□□□ -2.05
RGPD1-203ENST00000428128 UBFD1O14562 309 aaKnown RBP2.27□□□□□ -2.05
RGPD1-203ENST00000428128 CXorf1O96002 111 aa2.27□□□□□ -2.05
RGPD1-203ENST00000428128 PIPP12273 146 aaPredicted RBP2.27□□□□□ -2.05
RGPD1-203ENST00000428128 BTCP35070 178 aa2.27□□□□□ -2.05
RGPD1-203ENST00000428128 PPP1CCP36873 323 aaKnown RBP2.27□□□□□ -2.05
RGPD1-203ENST00000428128 NUDT2P50583 147 aa2.27□□□□□ -2.05
RGPD1-203ENST00000428128 P2RX1P51575 399 aa2.27□□□□□ -2.05
RGPD1-203ENST00000428128 GRB2P62993 217 aaKnown RBP2.27□□□□□ -2.05
RGPD1-203ENST00000428128 HOXC5Q00444 222 aa2.27□□□□□ -2.05
RGPD1-203ENST00000428128 EBI3Q14213 229 aa2.27□□□□□ -2.05
RGPD1-203ENST00000428128 JOSD1Q15040 202 aaPredicted RBP2.27□□□□□ -2.05
RGPD1-203ENST00000428128 HSD17B12Q53GQ0 312 aa2.27□□□□□ -2.05
RGPD1-203ENST00000428128 YIPF7Q8N8F6 280 aa2.27□□□□□ -2.05
RGPD1-203ENST00000428128 GPX7Q96SL4 187 aaPredicted RBP2.27□□□□□ -2.05
RGPD1-203ENST00000428128 SPANXDQ9BXN6 97 aa2.27□□□□□ -2.05
RGPD1-203ENST00000428128 MRPL32Q9BYC8 188 aaKnown RBP2.27□□□□□ -2.05
RGPD1-203ENST00000428128 TMEM191AQ9H0A3 160 aa2.27□□□□□ -2.05
RGPD1-203ENST00000428128 GTSF1LQ9H1H1 148 aa2.27□□□□□ -2.05
RGPD1-203ENST00000428128 ZNF286AQ9HBT8 521 aa2.27□□□□□ -2.05
RGPD1-203ENST00000428128 CCL28Q9NRJ3 127 aa2.27□□□□□ -2.05
RGPD1-203ENST00000428128 SCN3BQ9NY72 215 aa2.27□□□□□ -2.05
RGPD1-203ENST00000428128 DSPPQ9NZW4 1301 aa2.27□□□□□ -2.05
RGPD1-203ENST00000428128 SCN1AP35498 2009 aa2.27□□□□□ -2.05
RGPD1-203ENST00000428128 PHF3Q92576 2039 aaKnown RBP2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms