RNA–Protein interactions for RNA: ENST00000428120.5

FAAP20-209, Transcript of FA core complex associated protein 20, humanhuman

TSL 1 (best)

Gene FAAP20, Length 2,313 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-209ENST00000428120 CTRB1P17538 263 aa18.39■□□□□ 0.53
FAAP20-209ENST00000428120 TAS2R45P59539 299 aa18.39■□□□□ 0.53
FAAP20-209ENST00000428120 CX3CL1P78423 397 aa18.39■□□□□ 0.53
FAAP20-209ENST00000428120 NDPQ00604 133 aa18.39■□□□□ 0.53
FAAP20-209ENST00000428120 SRSF1Q07955 248 aaKnown RBP eCLIP18.39■□□□□ 0.53
FAAP20-209ENST00000428120 CTRB2Q6GPI1 263 aa18.39■□□□□ 0.53
FAAP20-209ENST00000428120 SLC25A2Q9BXI2 301 aa18.39■□□□□ 0.53
FAAP20-209ENST00000428120 TBL2Q9Y4P3 447 aaKnown RBP18.39■□□□□ 0.53
FAAP20-209ENST00000428120 ORM2P19652 201 aa18.39■□□□□ 0.53
FAAP20-209ENST00000428120 SELENOTP62341 195 aa18.39■□□□□ 0.53
FAAP20-209ENST00000428120 FLI1Q01543 452 aaPredicted RBP18.39■□□□□ 0.53
FAAP20-209ENST00000428120 F6UZH7 168 aa18.38■□□□□ 0.53
FAAP20-209ENST00000428120 CXCL1P09341 107 aa18.38■□□□□ 0.53
FAAP20-209ENST00000428120 PQLC2Q6ZP29 291 aa18.38■□□□□ 0.53
FAAP20-209ENST00000428120 MALSU1Q96EH3 234 aa18.38■□□□□ 0.53
FAAP20-209ENST00000428120 FAM167A-AS1Q96KT0 104 aa18.38■□□□□ 0.53
FAAP20-209ENST00000428120 ZNF355PQ9NSJ1 428 aa18.38■□□□□ 0.53
FAAP20-209ENST00000428120 TGIF2-C20orf24A0A0A6YYL0 155 aa18.38■□□□□ 0.53
FAAP20-209ENST00000428120 I3L2K1 104 aa18.38■□□□□ 0.53
FAAP20-209ENST00000428120 FOLR2P14207 255 aa18.38■□□□□ 0.53
FAAP20-209ENST00000428120 OR5AU1Q8NGC0 362 aa18.38■□□□□ 0.53
FAAP20-209ENST00000428120 TMEM167BQ9NRX6 74 aa18.38■□□□□ 0.53
FAAP20-209ENST00000428120 NDUFS6O75380 124 aaKnown RBP18.37■□□□□ 0.53
FAAP20-209ENST00000428120 SNRPCP09234 159 aaKnown RBP18.37■□□□□ 0.53
FAAP20-209ENST00000428120 OR1B1Q8NGR6 318 aa18.37■□□□□ 0.53
FAAP20-209ENST00000428120 PFDN5Q99471 154 aa18.37■□□□□ 0.53
FAAP20-209ENST00000428120 MRPL32Q9BYC8 188 aaKnown RBP18.37■□□□□ 0.53
FAAP20-209ENST00000428120 USP9YO00507 2555 aaPredicted RBP18.37■□□□□ 0.53
FAAP20-209ENST00000428120 CENPVL3A0A0U1RRI6 287 aa18.37■□□□□ 0.53
FAAP20-209ENST00000428120 ANKRD17O75179 2603 aaKnown RBP18.37■□□□□ 0.53
FAAP20-209ENST00000428120 BPIFB3P59826 476 aa18.37■□□□□ 0.53
FAAP20-209ENST00000428120 PTPN13Q12923 2485 aa18.37■□□□□ 0.53
FAAP20-209ENST00000428120 EBI3Q14213 229 aa18.37■□□□□ 0.53
FAAP20-209ENST00000428120 ARPC1AQ92747 370 aa18.37■□□□□ 0.53
FAAP20-209ENST00000428120 TRGV9Q99603 122 aa18.37■□□□□ 0.53
FAAP20-209ENST00000428120 TXNDC17Q9BRA2 123 aa18.37■□□□□ 0.53
FAAP20-209ENST00000428120 SRSF8Q9BRL6 282 aaKnown RBP18.37■□□□□ 0.53
FAAP20-209ENST00000428120 TRBV20OR9-2A0A075B6H5 130 aa18.36■□□□□ 0.53
FAAP20-209ENST00000428120 CXorf65A6NEN9 183 aa18.36■□□□□ 0.53
FAAP20-209ENST00000428120 CLDN34H7C241 214 aa18.36■□□□□ 0.53
FAAP20-209ENST00000428120 NPFFO15130 113 aa18.36■□□□□ 0.53
FAAP20-209ENST00000428120 PYYP10082 97 aa18.36■□□□□ 0.53
FAAP20-209ENST00000428120 C16orf82Q7Z2V1 217 aa18.36■□□□□ 0.53
FAAP20-209ENST00000428120 LINC00305Q7Z4B0 112 aa18.36■□□□□ 0.53
FAAP20-209ENST00000428120 OR1L4Q8NGR5 311 aa18.36■□□□□ 0.53
FAAP20-209ENST00000428120 S4R3C0 116 aa18.36■□□□□ 0.53
FAAP20-209ENST00000428120 FAM106CPP0CH98 169 aa18.35■□□□□ 0.53
FAAP20-209ENST00000428120 ASPHD1Q5U4P2 390 aa18.35■□□□□ 0.53
FAAP20-209ENST00000428120 ZNF562Q6V9R5 426 aa18.35■□□□□ 0.53
FAAP20-209ENST00000428120 VWC2LB2RUY7 222 aa18.35■□□□□ 0.53
FAAP20-209ENST00000428120 UBE2L3P68036 154 aaKnown RBP18.35■□□□□ 0.53
FAAP20-209ENST00000428120 NECAP1Q8NC96 275 aa18.35■□□□□ 0.53
FAAP20-209ENST00000428120 C1orf196B1AJZ1 125 aa18.34■□□□□ 0.53
FAAP20-209ENST00000428120 K7EIM0 57 aa18.34■□□□□ 0.53
FAAP20-209ENST00000428120 HNF1AP20823 631 aa18.34■□□□□ 0.53
FAAP20-209ENST00000428120 POLR3KQ9Y2Y1 108 aaPredicted RBP18.34■□□□□ 0.53
FAAP20-209ENST00000428120 RPS10P46783 165 aaKnown RBP18.34■□□□□ 0.53
FAAP20-209ENST00000428120 PAX8Q06710 450 aa18.34■□□□□ 0.53
FAAP20-209ENST00000428120 LINC01551Q86U37 167 aa18.34■□□□□ 0.53
FAAP20-209ENST00000428120 RNF2Q99496 336 aa18.34■□□□□ 0.53
FAAP20-209ENST00000428120 TMEM242Q9NWH2 141 aa18.34■□□□□ 0.53
FAAP20-209ENST00000428120 ABCA12Q86UK0 2595 aa18.34■□□□□ 0.53
FAAP20-209ENST00000428120 GGTLC3B5MD39 225 aa18.33■□□□□ 0.53
FAAP20-209ENST00000428120 NDUFS8O00217 210 aa18.33■□□□□ 0.53
FAAP20-209ENST00000428120 IGLC1P0CG04 106 aa18.33■□□□□ 0.53
FAAP20-209ENST00000428120 RAB5BP61020 215 aa18.33■□□□□ 0.53
FAAP20-209ENST00000428120 SAV1Q9H4B6 383 aaPredicted RBP18.33■□□□□ 0.53
FAAP20-209ENST00000428120 TIGITQ495A1 244 aa18.33■□□□□ 0.52
FAAP20-209ENST00000428120 BRD3OSQ6XYD6 125 aa18.33■□□□□ 0.52
FAAP20-209ENST00000428120 Q8N9W7 124 aa18.33■□□□□ 0.52
FAAP20-209ENST00000428120 BRS3P32247 399 aa18.32■□□□□ 0.52
FAAP20-209ENST00000428120 RBM14Q96PK6 669 aaKnown RBP18.32■□□□□ 0.52
FAAP20-209ENST00000428120 PSG1P11464 419 aa18.32■□□□□ 0.52
FAAP20-209ENST00000428120 CRYBB3P26998 211 aa18.32■□□□□ 0.52
FAAP20-209ENST00000428120 PAXXQ9BUH6 204 aa18.32■□□□□ 0.52
FAAP20-209ENST00000428120 CTDSP1Q9GZU7 261 aa18.32■□□□□ 0.52
FAAP20-209ENST00000428120 COX6B1P14854 86 aa18.31■□□□□ 0.52
FAAP20-209ENST00000428120 SUMO1P63165 101 aaKnown RBP18.31■□□□□ 0.52
FAAP20-209ENST00000428120 SMUG1Q53HV7 270 aa18.31■□□□□ 0.52
FAAP20-209ENST00000428120 HSPB9Q9BQS6 159 aa18.31■□□□□ 0.52
FAAP20-209ENST00000428120 ELOA3CA0A087WX78 387 aaPredicted RBP18.31■□□□□ 0.52
FAAP20-209ENST00000428120 IGHV7-81A0A0B4J1V7 117 aa18.31■□□□□ 0.52
FAAP20-209ENST00000428120 TRAV40A0A0B4J280 105 aa18.31■□□□□ 0.52
FAAP20-209ENST00000428120 H7BYZ3 331 aa18.31■□□□□ 0.52
FAAP20-209ENST00000428120 LEMD1Q68G75 181 aa18.31■□□□□ 0.52
FAAP20-209ENST00000428120 RASL11BQ9BPW5 248 aa18.31■□□□□ 0.52
FAAP20-209ENST00000428120 ELOVL1Q9BW60 279 aa18.31■□□□□ 0.52
FAAP20-209ENST00000428120 SH2D7A6NKC9 451 aaPredicted RBP18.3■□□□□ 0.52
FAAP20-209ENST00000428120 RPL35P42766 123 aaKnown RBP18.3■□□□□ 0.52
FAAP20-209ENST00000428120 LYZP61626 148 aa18.3■□□□□ 0.52
FAAP20-209ENST00000428120 FANCD2OSQ96PS1 177 aa18.3■□□□□ 0.52
FAAP20-209ENST00000428120 PRELID1Q9Y255 219 aa18.3■□□□□ 0.52
FAAP20-209ENST00000428120 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.3■□□□□ 0.525e-7■■■■□ 21.4
FAAP20-209ENST00000428120 HYPMO75409 117 aa18.29■□□□□ 0.52
FAAP20-209ENST00000428120 IGKV1-17P01599 117 aa18.29■□□□□ 0.52
FAAP20-209ENST00000428120 CLEC12BQ2HXU8 276 aa18.29■□□□□ 0.52
FAAP20-209ENST00000428120 OR51M1Q9H341 326 aa18.29■□□□□ 0.52
FAAP20-209ENST00000428120 C11orf52Q96A22 123 aa18.29■□□□□ 0.52
FAAP20-209ENST00000428120 ARL2-SNX15V9GYD0 113 aa18.29■□□□□ 0.52
FAAP20-209ENST00000428120 EGR2P11161 476 aaPredicted RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms