RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 KLF9Q13886 244 aaPredicted RBP13.55□□□□□ -0.24
PSPC1-202ENST00000427943 NMSQ5H8A3 153 aa13.55□□□□□ -0.24
PSPC1-202ENST00000427943 LEMD1Q68G75 181 aa13.55□□□□□ -0.24
PSPC1-202ENST00000427943 PRSS54Q6PEW0 395 aa13.55□□□□□ -0.24
PSPC1-202ENST00000427943 LYZL2Q7Z4W2 148 aa13.55□□□□□ -0.24
PSPC1-202ENST00000427943 RNASEH2CQ8TDP1 164 aaKnown RBP13.55□□□□□ -0.24
PSPC1-202ENST00000427943 V9GYH0 126 aa13.55□□□□□ -0.24
PSPC1-202ENST00000427943 TRAV30A0A087WSZ9 112 aa13.54□□□□□ -0.24
PSPC1-202ENST00000427943 A0A0B4J2A0 478 aa13.54□□□□□ -0.24
PSPC1-202ENST00000427943 CXorf65A6NEN9 183 aa13.54□□□□□ -0.24
PSPC1-202ENST00000427943 SLC25A4P12235 298 aa13.54□□□□□ -0.24
PSPC1-202ENST00000427943 CRYBB3P26998 211 aa13.54□□□□□ -0.24
PSPC1-202ENST00000427943 OR10J1P30954 320 aa13.54□□□□□ -0.24
PSPC1-202ENST00000427943 FAUP35544 74 aaKnown RBP13.54□□□□□ -0.24
PSPC1-202ENST00000427943 P2RY1P47900 373 aa13.54□□□□□ -0.24
PSPC1-202ENST00000427943 TNFRSF9Q07011 255 aa13.54□□□□□ -0.24
PSPC1-202ENST00000427943 SMCO1Q147U7 214 aa13.54□□□□□ -0.24
PSPC1-202ENST00000427943 RBMS2Q15434 407 aaKnown RBP13.54□□□□□ -0.24
PSPC1-202ENST00000427943 TMED4Q7Z7H5 227 aa13.54□□□□□ -0.24
PSPC1-202ENST00000427943 STXBP6Q8NFX7 210 aa13.54□□□□□ -0.24
PSPC1-202ENST00000427943 CSTL1Q9H114 145 aa13.54□□□□□ -0.24
PSPC1-202ENST00000427943 SHPKQ9UHJ6 478 aa13.54□□□□□ -0.24
PSPC1-202ENST00000427943 A0A1W2PS18 150 aa13.53□□□□□ -0.24
PSPC1-202ENST00000427943 IFNA10P01566 189 aa13.53□□□□□ -0.24
PSPC1-202ENST00000427943 CCR6P51684 374 aa13.53□□□□□ -0.24
PSPC1-202ENST00000427943 ZNF79Q15937 498 aa13.53□□□□□ -0.24
PSPC1-202ENST00000427943 LGI3Q8N145 548 aa13.53□□□□□ -0.24
PSPC1-202ENST00000427943 TOMM5Q8N4H5 51 aa13.53□□□□□ -0.24
PSPC1-202ENST00000427943 OR1S2Q8NGQ3 325 aa13.53□□□□□ -0.24
PSPC1-202ENST00000427943 RBKSQ9H477 322 aa13.53□□□□□ -0.24
PSPC1-202ENST00000427943 HSPB7Q9UBY9 170 aa13.53□□□□□ -0.24
PSPC1-202ENST00000427943 TRAV2A0A0B4J234 112 aa13.52□□□□□ -0.25
PSPC1-202ENST00000427943 MPTX1A8MV57 137 aa13.52□□□□□ -0.25
PSPC1-202ENST00000427943 ANXA3P12429 323 aa13.52□□□□□ -0.25
PSPC1-202ENST00000427943 AP3S2P59780 193 aa13.52□□□□□ -0.25
PSPC1-202ENST00000427943 DTD1Q8TEA8 209 aa13.52□□□□□ -0.25
PSPC1-202ENST00000427943 NPIPB3Q92617 1050 aa13.52□□□□□ -0.25
PSPC1-202ENST00000427943 ACY3Q96HD9 319 aa13.52□□□□□ -0.25
PSPC1-202ENST00000427943 NARS2Q96I59 477 aaKnown RBP13.52□□□□□ -0.25
PSPC1-202ENST00000427943 CA1P00915 261 aaPredicted RBP13.51□□□□□ -0.25
PSPC1-202ENST00000427943 S100A5P33763 92 aa13.51□□□□□ -0.25
PSPC1-202ENST00000427943 SRPXP78539 464 aa13.51□□□□□ -0.25
PSPC1-202ENST00000427943 ETFRF1Q6IPR1 90 aa13.51□□□□□ -0.25
PSPC1-202ENST00000427943 OR1S1Q8NH92 325 aa13.51□□□□□ -0.25
PSPC1-202ENST00000427943 Q8WTZ3 238 aa13.51□□□□□ -0.25
PSPC1-202ENST00000427943 RBM38Q9H0Z9 239 aaKnown RBP13.51□□□□□ -0.25
PSPC1-202ENST00000427943 CACFD1Q9UGQ2 172 aa13.51□□□□□ -0.25
PSPC1-202ENST00000427943 K7EQG2 157 aa13.5□□□□□ -0.25
PSPC1-202ENST00000427943 IL4P05112 153 aa13.5□□□□□ -0.25
PSPC1-202ENST00000427943 HNRNPCP07910 306 aaKnown RBP eCLIP13.5□□□□□ -0.25
PSPC1-202ENST00000427943 ZNF688P0C7X2 276 aa13.5□□□□□ -0.25
PSPC1-202ENST00000427943 VAMP1P23763 118 aa13.5□□□□□ -0.25
PSPC1-202ENST00000427943 YPEL3P61236 119 aaPredicted RBP13.5□□□□□ -0.25
PSPC1-202ENST00000427943 USF2Q15853 346 aaPredicted RBP13.5□□□□□ -0.25
PSPC1-202ENST00000427943 CCDC190Q86UF4 302 aa13.5□□□□□ -0.25
PSPC1-202ENST00000427943 NOXA1Q86UR1 476 aa13.5□□□□□ -0.25
PSPC1-202ENST00000427943 GRAMD2BQ96HH9 432 aa13.5□□□□□ -0.25
PSPC1-202ENST00000427943 ALMS1Q8TCU4 4167 aa13.5□□□□□ -0.25
PSPC1-202ENST00000427943 U3KQ87 197 aa13.49□□□□□ -0.25
PSPC1-202ENST00000427943 U3KQE9 123 aa13.49□□□□□ -0.25
PSPC1-202ENST00000427943 HYDINQ4G0P3 5121 aa13.49□□□□□ -0.25
PSPC1-202ENST00000427943 NUPR2A6NF83 97 aa13.48□□□□□ -0.25
PSPC1-202ENST00000427943 TOMM40O96008 361 aa13.48□□□□□ -0.25
PSPC1-202ENST00000427943 IFNA4P05014 189 aa13.48□□□□□ -0.25
PSPC1-202ENST00000427943 TMEM128Q5BJH2 165 aa13.48□□□□□ -0.25
PSPC1-202ENST00000427943 STHQ8IWL8 128 aa13.48□□□□□ -0.25
PSPC1-202ENST00000427943 DCANP1Q8TF63 244 aa13.48□□□□□ -0.25
PSPC1-202ENST00000427943 GATAD1Q8WUU5 269 aa13.48□□□□□ -0.25
PSPC1-202ENST00000427943 GLMPQ8WWB7 406 aa13.48□□□□□ -0.25
PSPC1-202ENST00000427943 RARRES2Q99969 163 aa13.48□□□□□ -0.25
PSPC1-202ENST00000427943 DNAH1Q9P2D7 4330 aa13.48□□□□□ -0.25
PSPC1-202ENST00000427943 DUXBA0A1W2PPF3 345 aa13.47□□□□□ -0.25
PSPC1-202ENST00000427943 KNCNA6PVL3 124 aa13.47□□□□□ -0.25
PSPC1-202ENST00000427943 IAPPP10997 89 aa13.47□□□□□ -0.25
PSPC1-202ENST00000427943 DHRS2Q13268 280 aa13.47□□□□□ -0.25
PSPC1-202ENST00000427943 C16orf54Q6UWD8 224 aa13.47□□□□□ -0.25
PSPC1-202ENST00000427943 TMEM217Q8N7C4 229 aa13.47□□□□□ -0.25
PSPC1-202ENST00000427943 OR11H2Q8NH07 326 aa13.47□□□□□ -0.25
PSPC1-202ENST00000427943 RD3LP0DJH9 198 aa13.46□□□□□ -0.25
PSPC1-202ENST00000427943 EIF2B2P49770 351 aaKnown RBP13.46□□□□□ -0.25
PSPC1-202ENST00000427943 PPP1R1AQ13522 171 aa13.46□□□□□ -0.25
PSPC1-202ENST00000427943 OR51G1Q8NGK1 321 aa13.46□□□□□ -0.25
PSPC1-202ENST00000427943 SLC25A21Q9BQT8 299 aaPredicted RBP13.46□□□□□ -0.25
PSPC1-202ENST00000427943 HELTA6NFD8 242 aa13.45□□□□□ -0.26
PSPC1-202ENST00000427943 PITX3O75364 302 aa13.45□□□□□ -0.26
PSPC1-202ENST00000427943 PSG1P11464 419 aa13.45□□□□□ -0.26
PSPC1-202ENST00000427943 ATF4P18848 351 aaPredicted RBP13.45□□□□□ -0.26
PSPC1-202ENST00000427943 CEMP1Q6PRD7 247 aaPredicted RBP13.45□□□□□ -0.26
PSPC1-202ENST00000427943 TRPT1Q86TN4 253 aaKnown RBP13.45□□□□□ -0.26
PSPC1-202ENST00000427943 CENPSQ8N2Z9 138 aa13.45□□□□□ -0.26
PSPC1-202ENST00000427943 LRTM2Q8N967 370 aa13.45□□□□□ -0.26
PSPC1-202ENST00000427943 LINC00476Q8WZB0 136 aa13.45□□□□□ -0.26
PSPC1-202ENST00000427943 SLC35E1Q96K37 410 aa13.45□□□□□ -0.26
PSPC1-202ENST00000427943 PBDC1Q9BVG4 233 aa13.45□□□□□ -0.26
PSPC1-202ENST00000427943 SRRQ9GZT4 340 aa13.45□□□□□ -0.26
PSPC1-202ENST00000427943 PIGBOS1A0A0B4J2F0 54 aa13.44□□□□□ -0.26
PSPC1-202ENST00000427943 ZFP92A6NM28 416 aa13.44□□□□□ -0.26
PSPC1-202ENST00000427943 DEFB4AO15263 64 aa13.44□□□□□ -0.26
PSPC1-202ENST00000427943 SFT2D2O95562 160 aa13.44□□□□□ -0.26
PSPC1-202ENST00000427943 C4BPBP20851 252 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms