RNA–Protein interactions for RNA: ENST00000427826.1

PHF1-204, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-204ENST00000427826 GBGT1Q8N5D6 347 aa11.23□□□□□ -0.61
PHF1-204ENST00000427826 OR1S2Q8NGQ3 325 aa11.23□□□□□ -0.61
PHF1-204ENST00000427826 MRPL36Q9P0J6 103 aaKnown RBP11.23□□□□□ -0.61
PHF1-204ENST00000427826 LYSTQ99698 3801 aa11.22□□□□□ -0.61
PHF1-204ENST00000427826 DFFBO76075 338 aa11.22□□□□□ -0.61
PHF1-204ENST00000427826 IGKV1-17P01599 117 aa11.22□□□□□ -0.61
PHF1-204ENST00000427826 APOHP02749 345 aaPredicted RBP11.22□□□□□ -0.61
PHF1-204ENST00000427826 RPL35AP18077 110 aaKnown RBP11.22□□□□□ -0.61
PHF1-204ENST00000427826 NPY1RP25929 384 aa11.22□□□□□ -0.61
PHF1-204ENST00000427826 CRYBB3P26998 211 aa11.22□□□□□ -0.61
PHF1-204ENST00000427826 ATP5IP56385 69 aaPredicted RBP11.22□□□□□ -0.61
PHF1-204ENST00000427826 SUPT4H1P63272 117 aaKnown RBP11.22□□□□□ -0.61
PHF1-204ENST00000427826 SMCO1Q147U7 214 aa11.22□□□□□ -0.61
PHF1-204ENST00000427826 PRSS54Q6PEW0 395 aa11.22□□□□□ -0.61
PHF1-204ENST00000427826 LYZL2Q7Z4W2 148 aa11.22□□□□□ -0.61
PHF1-204ENST00000427826 TMED4Q7Z7H5 227 aa11.22□□□□□ -0.61
PHF1-204ENST00000427826 APRG1Q8IVJ8 170 aa11.22□□□□□ -0.61
PHF1-204ENST00000427826 Q8WTZ3 238 aa11.22□□□□□ -0.61
PHF1-204ENST00000427826 RNF183Q96D59 192 aa11.22□□□□□ -0.61
PHF1-204ENST00000427826 GRAMD2BQ96HH9 432 aa11.22□□□□□ -0.61
PHF1-204ENST00000427826 SLC25A21Q9BQT8 299 aaPredicted RBP11.22□□□□□ -0.61
PHF1-204ENST00000427826 MS4A6AQ9H2W1 248 aa11.22□□□□□ -0.61
PHF1-204ENST00000427826 MAP6D1Q9H9H5 199 aa11.22□□□□□ -0.61
PHF1-204ENST00000427826 HSPB7Q9UBY9 170 aa11.22□□□□□ -0.61
PHF1-204ENST00000427826 U3KQ87 197 aa11.22□□□□□ -0.61
PHF1-204ENST00000427826 TENM2Q9NT68 2774 aa11.22□□□□□ -0.61
PHF1-204ENST00000427826 DUXBA0A1W2PPF3 345 aa11.21□□□□□ -0.61
PHF1-204ENST00000427826 NAP1L6A6NFF2 107 aa11.21□□□□□ -0.61
PHF1-204ENST00000427826 IFNA10P01566 189 aa11.21□□□□□ -0.61
PHF1-204ENST00000427826 YPEL3P61236 119 aaPredicted RBP11.21□□□□□ -0.61
PHF1-204ENST00000427826 TNFRSF9Q07011 255 aa11.21□□□□□ -0.61
PHF1-204ENST00000427826 DEFB135Q30KP9 77 aa11.21□□□□□ -0.61
PHF1-204ENST00000427826 TIGITQ495A1 244 aa11.21□□□□□ -0.61
PHF1-204ENST00000427826 TMEM128Q5BJH2 165 aa11.21□□□□□ -0.61
PHF1-204ENST00000427826 LILRB2Q8N423 598 aa11.21□□□□□ -0.61
PHF1-204ENST00000427826 CSTL1Q9H114 145 aa11.21□□□□□ -0.61
PHF1-204ENST00000427826 IGHV3-66A0A0C4DH42 116 aa11.2□□□□□ -0.62
PHF1-204ENST00000427826 CENPXA8MT69 81 aa11.2□□□□□ -0.62
PHF1-204ENST00000427826 MPTX1A8MV57 137 aa11.2□□□□□ -0.62
PHF1-204ENST00000427826 JTBO76095 146 aa11.2□□□□□ -0.62
PHF1-204ENST00000427826 IGLC1P0CG04 106 aa11.2□□□□□ -0.62
PHF1-204ENST00000427826 OR10J1P30954 320 aa11.2□□□□□ -0.62
PHF1-204ENST00000427826 EIF2B2P49770 351 aaKnown RBP11.2□□□□□ -0.62
PHF1-204ENST00000427826 RND2P52198 227 aa11.2□□□□□ -0.62
PHF1-204ENST00000427826 RBMS2Q15434 407 aaKnown RBP11.2□□□□□ -0.62
PHF1-204ENST00000427826 BAK1Q16611 211 aa11.2□□□□□ -0.62
PHF1-204ENST00000427826 TMEM217Q8N7C4 229 aa11.2□□□□□ -0.62
PHF1-204ENST00000427826 DTD1Q8TEA8 209 aa11.2□□□□□ -0.62
PHF1-204ENST00000427826 PRR13Q9NZ81 148 aa11.2□□□□□ -0.62
PHF1-204ENST00000427826 NXPH3O95157 252 aa11.19□□□□□ -0.62
PHF1-204ENST00000427826 LINC00299Q6ZSB3 139 aa11.19□□□□□ -0.62
PHF1-204ENST00000427826 OR1S1Q8NH92 325 aa11.19□□□□□ -0.62
PHF1-204ENST00000427826 C7orf50Q9BRJ6 194 aaKnown RBP11.19□□□□□ -0.62
PHF1-204ENST00000427826 RBKSQ9H477 322 aa11.19□□□□□ -0.62
PHF1-204ENST00000427826 RABAC1Q9UI14 185 aa11.19□□□□□ -0.62
PHF1-204ENST00000427826 A0A0J9YWU9 116 aa11.18□□□□□ -0.62
PHF1-204ENST00000427826 LINC00854A0A1B0GVQ3 168 aa11.18□□□□□ -0.62
PHF1-204ENST00000427826 HELTA6NFD8 242 aa11.18□□□□□ -0.62
PHF1-204ENST00000427826 A6NHS1 94 aa11.18□□□□□ -0.62
PHF1-204ENST00000427826 IL7P13232 177 aa11.18□□□□□ -0.62
PHF1-204ENST00000427826 ATF4P18848 351 aaPredicted RBP11.18□□□□□ -0.62
PHF1-204ENST00000427826 VAMP1P23763 118 aa11.18□□□□□ -0.62
PHF1-204ENST00000427826 P2RY1P47900 373 aa11.18□□□□□ -0.62
PHF1-204ENST00000427826 AP2S1P53680 142 aaPredicted RBP11.18□□□□□ -0.62
PHF1-204ENST00000427826 CNPY1Q3B7I2 92 aa11.18□□□□□ -0.62
PHF1-204ENST00000427826 LYG2Q86SG7 212 aa11.18□□□□□ -0.62
PHF1-204ENST00000427826 CENPSQ8N2Z9 138 aa11.18□□□□□ -0.62
PHF1-204ENST00000427826 LRTM2Q8N967 370 aa11.18□□□□□ -0.62
PHF1-204ENST00000427826 GATAD1Q8WUU5 269 aa11.18□□□□□ -0.62
PHF1-204ENST00000427826 TMEM170AQ8WVE7 144 aa11.18□□□□□ -0.62
PHF1-204ENST00000427826 NPIPB3Q92617 1050 aa11.18□□□□□ -0.62
PHF1-204ENST00000427826 ACY3Q96HD9 319 aa11.18□□□□□ -0.62
PHF1-204ENST00000427826 SDHCQ99643 169 aaPredicted RBP11.18□□□□□ -0.62
PHF1-204ENST00000427826 SACSQ9NZJ4 4579 aa11.18□□□□□ -0.62
PHF1-204ENST00000427826 IFNA4P05014 189 aa11.17□□□□□ -0.62
PHF1-204ENST00000427826 HNRNPCP07910 306 aaKnown RBP eCLIP11.17□□□□□ -0.62
PHF1-204ENST00000427826 RD3LP0DJH9 198 aa11.17□□□□□ -0.62
PHF1-204ENST00000427826 SLC25A6P12236 298 aa11.17□□□□□ -0.62
PHF1-204ENST00000427826 GPX4P36969 197 aaPredicted RBP11.17□□□□□ -0.62
PHF1-204ENST00000427826 DEFB131AP59861 70 aa11.17□□□□□ -0.62
PHF1-204ENST00000427826 ZNF124Q15973 351 aa11.17□□□□□ -0.62
PHF1-204ENST00000427826 STXBP6Q8NFX7 210 aa11.17□□□□□ -0.62
PHF1-204ENST00000427826 S100ZQ8WXG8 99 aa11.17□□□□□ -0.62
PHF1-204ENST00000427826 U3KQE9 123 aa11.17□□□□□ -0.62
PHF1-204ENST00000427826 RYR2Q92736 4967 aa11.16□□□□□ -0.62
PHF1-204ENST00000427826 FAM90A26D6RGX4 464 aa11.16□□□□□ -0.62
PHF1-204ENST00000427826 K7EQG2 157 aa11.16□□□□□ -0.62
PHF1-204ENST00000427826 MED6O75586 246 aa11.16□□□□□ -0.62
PHF1-204ENST00000427826 TOMM40O96008 361 aa11.16□□□□□ -0.62
PHF1-204ENST00000427826 STHQ8IWL8 128 aa11.16□□□□□ -0.62
PHF1-204ENST00000427826 CCDC32Q9BV29 185 aa11.16□□□□□ -0.62
PHF1-204ENST00000427826 PFDN2Q9UHV9 154 aa11.16□□□□□ -0.62
PHF1-204ENST00000427826 TMED3Q9Y3Q3 217 aa11.16□□□□□ -0.62
PHF1-204ENST00000427826 CXorf65A6NEN9 183 aa11.15□□□□□ -0.62
PHF1-204ENST00000427826 PITX3O75364 302 aa11.15□□□□□ -0.62
PHF1-204ENST00000427826 NDUFB6O95139 128 aa11.15□□□□□ -0.62
PHF1-204ENST00000427826 SFT2D2O95562 160 aa11.15□□□□□ -0.62
PHF1-204ENST00000427826 IL4P05112 153 aa11.15□□□□□ -0.62
PHF1-204ENST00000427826 UBE2MP61081 183 aaKnown RBP11.15□□□□□ -0.62
PHF1-204ENST00000427826 RAB11AP62491 216 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms