RNA–Protein interactions for RNA: ENST00000427157.1

LINC02541-201, Transcript of long intergenic non-protein coding RNA 2541, humanhuman

TSL 3 BASIC

Gene LINC02541, Length 327 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02541-201ENST00000427157 KCTD7Q96MP8 289 aa-0.53□□□□□ -2.49
LINC02541-201ENST00000427157 OR51V1Q9H2C8 321 aa-0.53□□□□□ -2.49
LINC02541-201ENST00000427157 PSTPIP2Q9H939 334 aa-0.53□□□□□ -2.49
LINC02541-201ENST00000427157 SPANXB1Q9NS25 103 aaPredicted RBP-0.53□□□□□ -2.49
LINC02541-201ENST00000427157 C14orf105Q9NVL8 296 aa-0.53□□□□□ -2.49
LINC02541-201ENST00000427157 SLC35A3Q9Y2D2 325 aa-0.53□□□□□ -2.49
LINC02541-201ENST00000427157 EP300Q09472 2414 aaPredicted RBP-0.53□□□□□ -2.49
LINC02541-201ENST00000427157 UNC13CQ8NB66 2214 aa-0.53□□□□□ -2.49
LINC02541-201ENST00000427157 TET1Q8NFU7 2136 aa-0.53□□□□□ -2.49
LINC02541-201ENST00000427157 HEATR1Q9H583 2144 aaKnown RBP-0.53□□□□□ -2.49
LINC02541-201ENST00000427157 FLGP20930 4061 aaPredicted RBP-0.54□□□□□ -2.5
LINC02541-201ENST00000427157 SCN10AQ9Y5Y9 1956 aa-0.54□□□□□ -2.5
LINC02541-201ENST00000427157 DCCP43146 1447 aa-0.54□□□□□ -2.5
LINC02541-201ENST00000427157 MYO3BQ8WXR4 1341 aa-0.54□□□□□ -2.5
LINC02541-201ENST00000427157 HECTD1Q9ULT8 2610 aa-0.54□□□□□ -2.5
LINC02541-201ENST00000427157 TMEM213A2RRL7 107 aa-0.54□□□□□ -2.5
LINC02541-201ENST00000427157 CD3DP04234 171 aa-0.54□□□□□ -2.5
LINC02541-201ENST00000427157 HBA1P69905 142 aa-0.54□□□□□ -2.5
LINC02541-201ENST00000427157 LINC01554Q52M75 96 aa-0.54□□□□□ -2.5
LINC02541-201ENST00000427157 HIST3H2BBQ8N257 126 aa-0.54□□□□□ -2.5
LINC02541-201ENST00000427157 OR13C4Q8NGS5 318 aa-0.54□□□□□ -2.5
LINC02541-201ENST00000427157 OR13D1Q8NGV5 346 aa-0.54□□□□□ -2.5
LINC02541-201ENST00000427157 DNAJB3Q8WWF6 145 aa-0.54□□□□□ -2.5
LINC02541-201ENST00000427157 PSMF1Q92530 271 aa-0.54□□□□□ -2.5
LINC02541-201ENST00000427157 ZC2HC1AQ96GY0 325 aa-0.54□□□□□ -2.5
LINC02541-201ENST00000427157 C6orf62Q9GZU0 229 aaPredicted RBP-0.54□□□□□ -2.5
LINC02541-201ENST00000427157 MAP1LC3AQ9H492 121 aa-0.54□□□□□ -2.5
LINC02541-201ENST00000427157 SLC39A9Q9NUM3 307 aa-0.54□□□□□ -2.5
LINC02541-201ENST00000427157 MED29Q9NX70 200 aa-0.54□□□□□ -2.5
LINC02541-201ENST00000427157 CHMP5Q9NZZ3 219 aa-0.54□□□□□ -2.5
LINC02541-201ENST00000427157 V9GYY5 206 aaPredicted RBP-0.54□□□□□ -2.5
LINC02541-201ENST00000427157 KIF13BQ9NQT8 1826 aa-0.54□□□□□ -2.5
LINC02541-201ENST00000427157 SONP18583 2426 aaKnown RBP-0.55□□□□□ -2.5
LINC02541-201ENST00000427157 APC2O95996 2303 aa-0.55□□□□□ -2.5
LINC02541-201ENST00000427157 EVPLLA8MZ36 301 aa-0.55□□□□□ -2.5
LINC02541-201ENST00000427157 BUB1B-PAK6H3BSN5 160 aa-0.55□□□□□ -2.5
LINC02541-201ENST00000427157 TYMSP04818 313 aa-0.55□□□□□ -2.5
LINC02541-201ENST00000427157 MARCKSL1P49006 195 aa-0.55□□□□□ -2.5
LINC02541-201ENST00000427157 NKX2-5P52952 324 aaPredicted RBP-0.55□□□□□ -2.5
LINC02541-201ENST00000427157 FXYD6P3P58550 94 aa-0.55□□□□□ -2.5
LINC02541-201ENST00000427157 CDKL4Q5MAI5 379 aa-0.55□□□□□ -2.5
LINC02541-201ENST00000427157 C1orf195Q5TG92 126 aa-0.55□□□□□ -2.5
LINC02541-201ENST00000427157 Q8N402 240 aa-0.55□□□□□ -2.5
LINC02541-201ENST00000427157 ST6GALNAC3Q8NDV1 305 aa-0.55□□□□□ -2.5
LINC02541-201ENST00000427157 OR10AC1Q8NH08 325 aa-0.55□□□□□ -2.5
LINC02541-201ENST00000427157 DCUN1D5Q9BTE7 237 aa-0.55□□□□□ -2.5
LINC02541-201ENST00000427157 TREM1Q9NP99 234 aa-0.55□□□□□ -2.5
LINC02541-201ENST00000427157 ORMDL1Q9P0S3 153 aa-0.55□□□□□ -2.5
LINC02541-201ENST00000427157 ERGIC3Q9Y282 383 aa-0.55□□□□□ -2.5
LINC02541-201ENST00000427157 CHCHD2Q9Y6H1 151 aaPredicted RBP-0.55□□□□□ -2.5
LINC02541-201ENST00000427157 TAF1LQ8IZX4 1826 aa-0.55□□□□□ -2.5
LINC02541-201ENST00000427157 MYO18AQ92614 2054 aaKnown RBP-0.55□□□□□ -2.5
LINC02541-201ENST00000427157 ACANP16112 2415 aa-0.56□□□□□ -2.5
LINC02541-201ENST00000427157 PTPRQQ9UMZ3 2332 aa-0.56□□□□□ -2.5
LINC02541-201ENST00000427157 USP9YO00507 2555 aaPredicted RBP-0.56□□□□□ -2.5
LINC02541-201ENST00000427157 TRAV9-1A0A075B6T8 112 aa-0.56□□□□□ -2.5
LINC02541-201ENST00000427157 IGLV3-32A0A0A0MS00 114 aa-0.56□□□□□ -2.5
LINC02541-201ENST00000427157 TRBV30A0A0K0K1B3 111 aa-0.56□□□□□ -2.5
LINC02541-201ENST00000427157 TRPC5OSA6NMA1 111 aa-0.56□□□□□ -2.5
LINC02541-201ENST00000427157 ZNF879B4DU55 563 aa-0.56□□□□□ -2.5
LINC02541-201ENST00000427157 AHSA1O95433 338 aa-0.56□□□□□ -2.5
LINC02541-201ENST00000427157 SPINK1P00995 79 aa-0.56□□□□□ -2.5
LINC02541-201ENST00000427157 RPL12P30050 165 aaKnown RBP-0.56□□□□□ -2.5
LINC02541-201ENST00000427157 ANGPT1Q15389 498 aa-0.56□□□□□ -2.5
LINC02541-201ENST00000427157 ESRGQ1W209 222 aa-0.56□□□□□ -2.5
LINC02541-201ENST00000427157 BRMS1LQ5PSV4 323 aa-0.56□□□□□ -2.5
LINC02541-201ENST00000427157 PLEKHG7Q6ZR37 379 aa-0.56□□□□□ -2.5
LINC02541-201ENST00000427157 LRRC25Q8N386 305 aaPredicted RBP-0.56□□□□□ -2.5
LINC02541-201ENST00000427157 OR52R1Q8NGF1 315 aa-0.56□□□□□ -2.5
LINC02541-201ENST00000427157 TEX47Q8TBZ9 253 aa-0.56□□□□□ -2.5
LINC02541-201ENST00000427157 H1FXQ92522 213 aaKnown RBP-0.56□□□□□ -2.5
LINC02541-201ENST00000427157 LINC00052Q96N35 136 aa-0.56□□□□□ -2.5
LINC02541-201ENST00000427157 OR52A5Q9H2C5 316 aa-0.56□□□□□ -2.5
LINC02541-201ENST00000427157 LOC285556D6RIA3 1793 aa-0.56□□□□□ -2.5
LINC02541-201ENST00000427157 TGP01266 2768 aa-0.56□□□□□ -2.5
LINC02541-201ENST00000427157 FAT2Q9NYQ8 4349 aa-0.56□□□□□ -2.5
LINC02541-201ENST00000427157 NCOR1O75376 2440 aa-0.57□□□□□ -2.5
LINC02541-201ENST00000427157 CACNA1HO95180 2353 aa-0.57□□□□□ -2.5
LINC02541-201ENST00000427157 TPM1P09493 284 aa-0.57□□□□□ -2.5
LINC02541-201ENST00000427157 UCHL3P15374 230 aa-0.57□□□□□ -2.5
LINC02541-201ENST00000427157 CDC42P60953 191 aa-0.57□□□□□ -2.5
LINC02541-201ENST00000427157 PXT1Q8NFP0 134 aa-0.57□□□□□ -2.5
LINC02541-201ENST00000427157 C11orf68Q9H3H3 251 aaKnown RBP-0.57□□□□□ -2.5
LINC02541-201ENST00000427157 OSTCQ9NRP0 149 aa-0.57□□□□□ -2.5
LINC02541-201ENST00000427157 NHP2Q9NX24 153 aaKnown RBP-0.57□□□□□ -2.5
LINC02541-201ENST00000427157 CMTM6Q9NX76 183 aa-0.57□□□□□ -2.5
LINC02541-201ENST00000427157 FBXL12Q9NXK8 326 aa-0.57□□□□□ -2.5
LINC02541-201ENST00000427157 SBF1O95248 1867 aa-0.57□□□□□ -2.5
LINC02541-201ENST00000427157 CHD3Q12873 2000 aaKnown RBP-0.57□□□□□ -2.5
LINC02541-201ENST00000427157 TEP1Q99973 2627 aaKnown RBP-0.57□□□□□ -2.5
LINC02541-201ENST00000427157 POLQO75417 2590 aa-0.57□□□□□ -2.5
LINC02541-201ENST00000427157 ITPR3Q14573 2671 aa-0.58□□□□□ -2.5
LINC02541-201ENST00000427157 TCRBV4S1A1TA0A5B7 111 aa-0.58□□□□□ -2.5
LINC02541-201ENST00000427157 DPRXA6NFQ7 191 aa-0.58□□□□□ -2.5
LINC02541-201ENST00000427157 PFDN6O15212 129 aa-0.58□□□□□ -2.5
LINC02541-201ENST00000427157 SSNA1O43805 119 aa-0.58□□□□□ -2.5
LINC02541-201ENST00000427157 NAA20P61599 178 aa-0.58□□□□□ -2.5
LINC02541-201ENST00000427157 AADACL4Q5VUY2 407 aa-0.58□□□□□ -2.5
LINC02541-201ENST00000427157 GLIPR1L1Q6UWM5 242 aa-0.58□□□□□ -2.5
LINC02541-201ENST00000427157 CNPY4Q8N129 248 aa-0.58□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms