RNA–Protein interactions for RNA: ENST00000425938.5

SLC6A1-202, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-202ENST00000425938 LINC00854A0A1B0GVQ3 168 aa13.02□□□□□ -0.33
SLC6A1-202ENST00000425938 A0A1W2PS18 150 aa13.02□□□□□ -0.33
SLC6A1-202ENST00000425938 NDUFB6O95139 128 aa13.02□□□□□ -0.33
SLC6A1-202ENST00000425938 IGKV1-17P01599 117 aa13.02□□□□□ -0.33
SLC6A1-202ENST00000425938 SLC25A6P12236 298 aa13.02□□□□□ -0.33
SLC6A1-202ENST00000425938 LYL1P12980 280 aa13.02□□□□□ -0.33
SLC6A1-202ENST00000425938 CMC4P56277 68 aaPredicted RBP13.02□□□□□ -0.33
SLC6A1-202ENST00000425938 ATP5IP56385 69 aaPredicted RBP13.02□□□□□ -0.33
SLC6A1-202ENST00000425938 ODF3L2Q3SX64 289 aa13.02□□□□□ -0.33
SLC6A1-202ENST00000425938 TCF24Q7RTU0 167 aa13.02□□□□□ -0.33
SLC6A1-202ENST00000425938 TMEM170AQ8WVE7 144 aa13.02□□□□□ -0.33
SLC6A1-202ENST00000425938 ST8SIA2Q92186 375 aa13.02□□□□□ -0.33
SLC6A1-202ENST00000425938 VSIRQ9H7M9 311 aa13.02□□□□□ -0.33
SLC6A1-202ENST00000425938 EDA2RQ9HAV5 297 aa13.02□□□□□ -0.33
SLC6A1-202ENST00000425938 MED6O75586 246 aa13.01□□□□□ -0.33
SLC6A1-202ENST00000425938 IFNA4P05014 189 aa13.01□□□□□ -0.33
SLC6A1-202ENST00000425938 IGLC1P0CG04 106 aa13.01□□□□□ -0.33
SLC6A1-202ENST00000425938 OR10J1P30954 320 aa13.01□□□□□ -0.33
SLC6A1-202ENST00000425938 TFPI2P48307 235 aa13.01□□□□□ -0.33
SLC6A1-202ENST00000425938 APOC4P55056 127 aa13.01□□□□□ -0.33
SLC6A1-202ENST00000425938 RPL11P62913 178 aaKnown RBP13.01□□□□□ -0.33
SLC6A1-202ENST00000425938 FAM90A2PQ658T7 463 aa13.01□□□□□ -0.33
SLC6A1-202ENST00000425938 Q8WTZ3 238 aa13.01□□□□□ -0.33
SLC6A1-202ENST00000425938 SDHCQ99643 169 aaPredicted RBP13.01□□□□□ -0.33
SLC6A1-202ENST00000425938 C7orf50Q9BRJ6 194 aaKnown RBP13.01□□□□□ -0.33
SLC6A1-202ENST00000425938 IGHV3-66A0A0C4DH42 116 aa13□□□□□ -0.33
SLC6A1-202ENST00000425938 FAM90A26D6RGX4 464 aa13□□□□□ -0.33
SLC6A1-202ENST00000425938 PITX3O75364 302 aa13□□□□□ -0.33
SLC6A1-202ENST00000425938 APOHP02749 345 aaPredicted RBP13□□□□□ -0.33
SLC6A1-202ENST00000425938 HOXB5P09067 269 aa13□□□□□ -0.33
SLC6A1-202ENST00000425938 IL7P13232 177 aa13□□□□□ -0.33
SLC6A1-202ENST00000425938 YPEL3P61236 119 aaPredicted RBP13□□□□□ -0.33
SLC6A1-202ENST00000425938 GBGT1Q8N5D6 347 aa13□□□□□ -0.33
SLC6A1-202ENST00000425938 NPIPB3Q92617 1050 aa13□□□□□ -0.33
SLC6A1-202ENST00000425938 ACY3Q96HD9 319 aa13□□□□□ -0.33
SLC6A1-202ENST00000425938 DNASE2O00115 360 aaPredicted RBP12.99□□□□□ -0.33
SLC6A1-202ENST00000425938 DFFBO76075 338 aa12.99□□□□□ -0.33
SLC6A1-202ENST00000425938 GRAMD2BQ96HH9 432 aa12.99□□□□□ -0.33
SLC6A1-202ENST00000425938 CIB3Q96Q77 187 aaPredicted RBP12.99□□□□□ -0.33
SLC6A1-202ENST00000425938 C9orf170A2RU37 121 aa12.98□□□□□ -0.33
SLC6A1-202ENST00000425938 CRYBB3P26998 211 aa12.98□□□□□ -0.33
SLC6A1-202ENST00000425938 RAB11AP62491 216 aa12.98□□□□□ -0.33
SLC6A1-202ENST00000425938 WFDC3Q8IUB2 231 aa12.98□□□□□ -0.33
SLC6A1-202ENST00000425938 COQ8AQ8NI60 647 aa12.98□□□□□ -0.33
SLC6A1-202ENST00000425938 MS4A6AQ9H2W1 248 aa12.98□□□□□ -0.33
SLC6A1-202ENST00000425938 TRAV2A0A0B4J234 112 aa12.97□□□□□ -0.33
SLC6A1-202ENST00000425938 RD3LP0DJH9 198 aa12.97□□□□□ -0.33
SLC6A1-202ENST00000425938 IAPPP10997 89 aa12.97□□□□□ -0.33
SLC6A1-202ENST00000425938 GPX4P36969 197 aaPredicted RBP12.97□□□□□ -0.33
SLC6A1-202ENST00000425938 P2RY1P47900 373 aa12.97□□□□□ -0.33
SLC6A1-202ENST00000425938 RPP30P78346 268 aaKnown RBP12.97□□□□□ -0.33
SLC6A1-202ENST00000425938 CNPY1Q3B7I2 92 aa12.97□□□□□ -0.33
SLC6A1-202ENST00000425938 C4orf46Q504U0 113 aa12.97□□□□□ -0.33
SLC6A1-202ENST00000425938 GGNBP1Q5YKI7 109 aa12.97□□□□□ -0.33
SLC6A1-202ENST00000425938 LILRB2Q8N423 598 aa12.97□□□□□ -0.33
SLC6A1-202ENST00000425938 SLC35E1Q96K37 410 aa12.97□□□□□ -0.33
SLC6A1-202ENST00000425938 PAIP2BQ9ULR5 123 aaKnown RBP12.97□□□□□ -0.33
SLC6A1-202ENST00000425938 FLVCR2Q9UPI3 526 aa12.97□□□□□ -0.33
SLC6A1-202ENST00000425938 KIR2DL5BA0A0G2JN68 375 aa12.96□□□□□ -0.33
SLC6A1-202ENST00000425938 KIR2DL5BA0A0G2JPC4 375 aa12.96□□□□□ -0.33
SLC6A1-202ENST00000425938 UBE2CO00762 179 aa12.96□□□□□ -0.33
SLC6A1-202ENST00000425938 SYNGR2O43760 224 aa12.96□□□□□ -0.33
SLC6A1-202ENST00000425938 TOMM40O96008 361 aa12.96□□□□□ -0.33
SLC6A1-202ENST00000425938 IFNA21P01568 189 aa12.96□□□□□ -0.33
SLC6A1-202ENST00000425938 HNRNPCP07910 306 aaKnown RBP eCLIP12.96□□□□□ -0.33
SLC6A1-202ENST00000425938 OR4E1P0C645 316 aa12.96□□□□□ -0.33
SLC6A1-202ENST00000425938 RPL35AP18077 110 aaKnown RBP12.96□□□□□ -0.33
SLC6A1-202ENST00000425938 BTCP35070 178 aa12.96□□□□□ -0.33
SLC6A1-202ENST00000425938 EIF2B2P49770 351 aaKnown RBP12.96□□□□□ -0.33
SLC6A1-202ENST00000425938 DHRS2Q13268 280 aa12.96□□□□□ -0.33
SLC6A1-202ENST00000425938 LYG2Q86SG7 212 aa12.96□□□□□ -0.33
SLC6A1-202ENST00000425938 APRG1Q8IVJ8 170 aa12.96□□□□□ -0.33
SLC6A1-202ENST00000425938 KIR2DL5AQ8N109 375 aa12.96□□□□□ -0.33
SLC6A1-202ENST00000425938 STPG3Q8N7X2 389 aa12.96□□□□□ -0.33
SLC6A1-202ENST00000425938 KIR2DL5BQ8NHK3 375 aa12.96□□□□□ -0.33
SLC6A1-202ENST00000425938 MAP6D1Q9H9H5 199 aa12.96□□□□□ -0.33
SLC6A1-202ENST00000425938 RABAC1Q9UI14 185 aa12.96□□□□□ -0.33
SLC6A1-202ENST00000425938 ZFP92A6NM28 416 aa12.95□□□□□ -0.34
SLC6A1-202ENST00000425938 IL4P05112 153 aa12.95□□□□□ -0.34
SLC6A1-202ENST00000425938 ANXA7P20073 488 aaKnown RBP12.95□□□□□ -0.34
SLC6A1-202ENST00000425938 Q6ZWC4 215 aa12.95□□□□□ -0.34
SLC6A1-202ENST00000425938 STXBP6Q8NFX7 210 aa12.95□□□□□ -0.34
SLC6A1-202ENST00000425938 IL17DQ8TAD2 202 aa12.95□□□□□ -0.34
SLC6A1-202ENST00000425938 MAGT1Q9H0U3 335 aa12.95□□□□□ -0.34
SLC6A1-202ENST00000425938 HELTA6NFD8 242 aa12.94□□□□□ -0.34
SLC6A1-202ENST00000425938 FABP1P07148 127 aa12.94□□□□□ -0.34
SLC6A1-202ENST00000425938 GAMTQ14353 236 aa12.94□□□□□ -0.34
SLC6A1-202ENST00000425938 ZFAND6Q6FIF0 208 aa12.94□□□□□ -0.34
SLC6A1-202ENST00000425938 OVOL2Q9BRP0 275 aa12.94□□□□□ -0.34
SLC6A1-202ENST00000425938 TP53TG1Q9Y2A0 90 aa12.94□□□□□ -0.34
SLC6A1-202ENST00000425938 STARD9Q9P2P6 4700 aa12.93□□□□□ -0.34
SLC6A1-202ENST00000425938 WRBO00258 174 aa12.93□□□□□ -0.34
SLC6A1-202ENST00000425938 LYRM1O43325 122 aa12.93□□□□□ -0.34
SLC6A1-202ENST00000425938 ADAP1O75689 374 aa12.93□□□□□ -0.34
SLC6A1-202ENST00000425938 PSG1P11464 419 aa12.93□□□□□ -0.34
SLC6A1-202ENST00000425938 AP2S1P53680 142 aaPredicted RBP12.93□□□□□ -0.34
SLC6A1-202ENST00000425938 USF2Q15853 346 aaPredicted RBP12.93□□□□□ -0.34
SLC6A1-202ENST00000425938 DEFB135Q30KP9 77 aa12.93□□□□□ -0.34
SLC6A1-202ENST00000425938 OR51G1Q8NGK1 321 aa12.93□□□□□ -0.34
SLC6A1-202ENST00000425938 PFDN2Q9UHV9 154 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms