RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 UBE2G1P62253 170 aa6.1□□□□□ -1.43
SMARCC1-202ENST00000425518 GDF5OSQ5U4N7 250 aa6.1□□□□□ -1.43
SMARCC1-202ENST00000425518 STPG4Q8N801 248 aa6.1□□□□□ -1.43
SMARCC1-202ENST00000425518 OR2D3Q8NGH3 330 aa6.1□□□□□ -1.43
SMARCC1-202ENST00000425518 NDUFA4L2Q9NRX3 87 aa6.1□□□□□ -1.43
SMARCC1-202ENST00000425518 HIGD1CA8MV81 97 aa6.09□□□□□ -1.43
SMARCC1-202ENST00000425518 MOSP00540 346 aa6.09□□□□□ -1.43
SMARCC1-202ENST00000425518 CD24P25063 80 aa6.09□□□□□ -1.43
SMARCC1-202ENST00000425518 WT1-ASQ06250 92 aa6.09□□□□□ -1.43
SMARCC1-202ENST00000425518 PATE2Q6UY27 113 aa6.09□□□□□ -1.43
SMARCC1-202ENST00000425518 LINC00305Q7Z4B0 112 aa6.09□□□□□ -1.43
SMARCC1-202ENST00000425518 FAM169BQ8N8A8 192 aa6.09□□□□□ -1.43
SMARCC1-202ENST00000425518 OR1B1Q8NGR6 318 aa6.09□□□□□ -1.43
SMARCC1-202ENST00000425518 FAM222BQ8WU58 562 aa6.09□□□□□ -1.43
SMARCC1-202ENST00000425518 CACNG8Q8WXS5 425 aa6.09□□□□□ -1.43
SMARCC1-202ENST00000425518 MRPL32Q9BYC8 188 aaKnown RBP6.09□□□□□ -1.43
SMARCC1-202ENST00000425518 MRPL36Q9P0J6 103 aaKnown RBP6.09□□□□□ -1.43
SMARCC1-202ENST00000425518 IGLV3-9A0A075B6K5 115 aa6.09□□□□□ -1.43
SMARCC1-202ENST00000425518 PGPA6NDG6 321 aa6.09□□□□□ -1.43
SMARCC1-202ENST00000425518 H0YJW9 148 aa6.09□□□□□ -1.43
SMARCC1-202ENST00000425518 Q6ZVH6 145 aa6.09□□□□□ -1.43
SMARCC1-202ENST00000425518 TCF24Q7RTU0 167 aa6.09□□□□□ -1.43
SMARCC1-202ENST00000425518 ZNF329Q86UD4 541 aa6.09□□□□□ -1.43
SMARCC1-202ENST00000425518 ZADH2Q8N4Q0 377 aa6.09□□□□□ -1.43
SMARCC1-202ENST00000425518 OSR1Q8TAX0 266 aaPredicted RBP6.09□□□□□ -1.43
SMARCC1-202ENST00000425518 SAP30LQ9HAJ7 183 aa6.09□□□□□ -1.43
SMARCC1-202ENST00000425518 SSUH2Q9Y2M2 353 aa6.09□□□□□ -1.43
SMARCC1-202ENST00000425518 LAMTOR2Q9Y2Q5 125 aa6.09□□□□□ -1.43
SMARCC1-202ENST00000425518 PIEZO2Q9H5I5 2752 aa6.09□□□□□ -1.43
SMARCC1-202ENST00000425518 APC2O95996 2303 aa6.09□□□□□ -1.43
SMARCC1-202ENST00000425518 CACNA1BQ00975 2339 aa6.09□□□□□ -1.43
SMARCC1-202ENST00000425518 MBD3L4A6NDZ8 208 aaPredicted RBP6.09□□□□□ -1.44
SMARCC1-202ENST00000425518 MBD3L3A6NE82 208 aaPredicted RBP6.09□□□□□ -1.44
SMARCC1-202ENST00000425518 MBD3L5A6NJ08 208 aaPredicted RBP6.09□□□□□ -1.44
SMARCC1-202ENST00000425518 SLC25A17O43808 307 aa6.09□□□□□ -1.44
SMARCC1-202ENST00000425518 CTRLP40313 264 aa6.09□□□□□ -1.44
SMARCC1-202ENST00000425518 FOXA3P55318 350 aaPredicted RBP6.09□□□□□ -1.44
SMARCC1-202ENST00000425518 C19orf35Q6ZS72 473 aa6.09□□□□□ -1.44
SMARCC1-202ENST00000425518 KLHDC1Q8N7A1 406 aa6.09□□□□□ -1.44
SMARCC1-202ENST00000425518 OR1L4Q8NGR5 311 aa6.09□□□□□ -1.44
SMARCC1-202ENST00000425518 MBD3L2Q8NHZ7 208 aaPredicted RBP6.09□□□□□ -1.44
SMARCC1-202ENST00000425518 CCL17Q92583 94 aa6.09□□□□□ -1.44
SMARCC1-202ENST00000425518 GRAMD2BQ96HH9 432 aa6.09□□□□□ -1.44
SMARCC1-202ENST00000425518 LOXL4Q96JB6 756 aa6.09□□□□□ -1.44
SMARCC1-202ENST00000425518 NCOR1P1Q9H4R4 102 aa6.09□□□□□ -1.44
SMARCC1-202ENST00000425518 ZNF430Q9H8G1 570 aaPredicted RBP6.09□□□□□ -1.44
SMARCC1-202ENST00000425518 M0QZ24 198 aa6.08□□□□□ -1.44
SMARCC1-202ENST00000425518 TM4SF5O14894 197 aa6.08□□□□□ -1.44
SMARCC1-202ENST00000425518 TOX4O94842 621 aa6.08□□□□□ -1.44
SMARCC1-202ENST00000425518 PRB4P10163 310 aaPredicted RBP6.08□□□□□ -1.44
SMARCC1-202ENST00000425518 GATA4P43694 442 aa6.08□□□□□ -1.44
SMARCC1-202ENST00000425518 ATP5IP56385 69 aaPredicted RBP6.08□□□□□ -1.44
SMARCC1-202ENST00000425518 BPIFB3P59826 476 aa6.08□□□□□ -1.44
SMARCC1-202ENST00000425518 PRB3Q04118 309 aaPredicted RBP6.08□□□□□ -1.44
SMARCC1-202ENST00000425518 PMCHL1Q16048 86 aa6.08□□□□□ -1.44
SMARCC1-202ENST00000425518 MRPL52Q86TS9 123 aaKnown RBP6.08□□□□□ -1.44
SMARCC1-202ENST00000425518 PDPNQ86YL7 162 aa6.08□□□□□ -1.44
SMARCC1-202ENST00000425518 WFDC8Q8IUA0 241 aa6.08□□□□□ -1.44
SMARCC1-202ENST00000425518 PNKDQ8N490 385 aa6.08□□□□□ -1.44
SMARCC1-202ENST00000425518 GAL3ST2Q9H3Q3 398 aa6.08□□□□□ -1.44
SMARCC1-202ENST00000425518 TIMM8BQ9Y5J9 83 aaPredicted RBP6.08□□□□□ -1.44
SMARCC1-202ENST00000425518 NKX6-3A6NJ46 265 aa6.08□□□□□ -1.44
SMARCC1-202ENST00000425518 CD40P25942 277 aa6.08□□□□□ -1.44
SMARCC1-202ENST00000425518 SUB1P53999 127 aaKnown RBP eCLIP6.08□□□□□ -1.442e-9■■■■□ 22.5
SMARCC1-202ENST00000425518 LEMD1Q68G75 181 aa6.08□□□□□ -1.44
SMARCC1-202ENST00000425518 TMEM200BQ69YZ2 307 aa6.08□□□□□ -1.44
SMARCC1-202ENST00000425518 IGFL2Q6UWQ7 119 aa6.08□□□□□ -1.44
SMARCC1-202ENST00000425518 ZNF714Q96N38 554 aa6.08□□□□□ -1.44
SMARCC1-202ENST00000425518 FAM215AQ9Y5M1 114 aa6.08□□□□□ -1.44
SMARCC1-202ENST00000425518 LINC00312Q9Y6C7 94 aa6.08□□□□□ -1.44
SMARCC1-202ENST00000425518 DMXL2Q8TDJ6 3036 aa6.08□□□□□ -1.44
SMARCC1-202ENST00000425518 TCRBV4S1A1TA0A5B7 111 aa6.08□□□□□ -1.44
SMARCC1-202ENST00000425518 PSMB11A5LHX3 300 aa6.08□□□□□ -1.44
SMARCC1-202ENST00000425518 SH2D7A6NKC9 451 aaPredicted RBP6.08□□□□□ -1.44
SMARCC1-202ENST00000425518 ZNF137PP52743 207 aa6.08□□□□□ -1.44
SMARCC1-202ENST00000425518 EBLN2Q6P2I7 272 aa6.08□□□□□ -1.44
SMARCC1-202ENST00000425518 ZNF833PQ6ZTB9 187 aa6.08□□□□□ -1.44
SMARCC1-202ENST00000425518 OR4C13Q8NGP0 309 aa6.08□□□□□ -1.44
SMARCC1-202ENST00000425518 RITA1Q96K30 269 aa6.08□□□□□ -1.44
SMARCC1-202ENST00000425518 TPSG1Q9NRR2 321 aa6.08□□□□□ -1.44
SMARCC1-202ENST00000425518 TNFRSF19Q9NS68 423 aa6.08□□□□□ -1.44
SMARCC1-202ENST00000425518 CLEC5AQ9NY25 188 aa6.08□□□□□ -1.44
SMARCC1-202ENST00000425518 ZNF835Q9Y2P0 537 aa6.08□□□□□ -1.44
SMARCC1-202ENST00000425518 ACACAQ13085 2346 aa6.08□□□□□ -1.44
SMARCC1-202ENST00000425518 FTH1P19P0C7X4 201 aa6.07□□□□□ -1.44
SMARCC1-202ENST00000425518 HIST1H1EP10412 219 aaKnown RBP6.07□□□□□ -1.44
SMARCC1-202ENST00000425518 BTF3P20290 206 aaKnown RBP6.07□□□□□ -1.44
SMARCC1-202ENST00000425518 GAGE1Q13065 139 aa6.07□□□□□ -1.44
SMARCC1-202ENST00000425518 ST6GALNAC6Q969X2 333 aa6.07□□□□□ -1.44
SMARCC1-202ENST00000425518 FXYD5Q96DB9 178 aa6.07□□□□□ -1.44
SMARCC1-202ENST00000425518 SH3BGRL2Q9UJC5 107 aa6.07□□□□□ -1.44
SMARCC1-202ENST00000425518 ZFP30Q9Y2G7 519 aa6.07□□□□□ -1.44
SMARCC1-202ENST00000425518 ADGRG4Q8IZF6 3080 aa6.07□□□□□ -1.44
SMARCC1-202ENST00000425518 FAM181BA6NEQ2 426 aa6.07□□□□□ -1.44
SMARCC1-202ENST00000425518 VWC2LB2RUY7 222 aa6.07□□□□□ -1.44
SMARCC1-202ENST00000425518 RUSC1-AS1Q66K80 236 aa6.07□□□□□ -1.44
SMARCC1-202ENST00000425518 ZNF841Q6ZN19 808 aa6.07□□□□□ -1.44
SMARCC1-202ENST00000425518 KIR3DL3Q8N743 410 aa6.07□□□□□ -1.44
SMARCC1-202ENST00000425518 OR5AN1Q8NGI8 311 aa6.07□□□□□ -1.44
SMARCC1-202ENST00000425518 PGLYRP4Q96LB8 373 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms