RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 CST9LP1Q5W188 147 aa20.91■□□□□ 0.94
LDB1-202ENST00000425280 LINC01356Q8N9X3 169 aa20.91■□□□□ 0.94
LDB1-202ENST00000425280 RNF2Q99496 336 aa20.91■□□□□ 0.94
LDB1-202ENST00000425280 PTPN13Q12923 2485 aa20.9■□□□□ 0.94
LDB1-202ENST00000425280 AVPP01185 164 aa20.9■□□□□ 0.94
LDB1-202ENST00000425280 OR1L4Q8NGR5 311 aa20.9■□□□□ 0.94
LDB1-202ENST00000425280 PIFOQ8TCI5 191 aa20.9■□□□□ 0.94
LDB1-202ENST00000425280 ZNF503Q96F45 646 aa20.9■□□□□ 0.94
LDB1-202ENST00000425280 FANCD2OSQ96PS1 177 aa20.9■□□□□ 0.94
LDB1-202ENST00000425280 PFDN5Q99471 154 aa20.9■□□□□ 0.94
LDB1-202ENST00000425280 SOX21Q9Y651 276 aaPredicted RBP20.9■□□□□ 0.94
LDB1-202ENST00000425280 POLQO75417 2590 aa20.9■□□□□ 0.94
LDB1-202ENST00000425280 J3QKU1 62 aa20.9■□□□□ 0.94
LDB1-202ENST00000425280 MORN5Q5VZ52 161 aa20.9■□□□□ 0.94
LDB1-202ENST00000425280 IGLV11-55A0A075B6I3 123 aa20.89■□□□□ 0.93
LDB1-202ENST00000425280 IGLC1P0CG04 106 aa20.89■□□□□ 0.93
LDB1-202ENST00000425280 C8orf88P0DMB2 117 aa20.89■□□□□ 0.93
LDB1-202ENST00000425280 TAS2R45P59539 299 aa20.89■□□□□ 0.93
LDB1-202ENST00000425280 C10orf113Q5VZT2 155 aa20.89■□□□□ 0.93
LDB1-202ENST00000425280 SMCO4Q9NRQ5 59 aa20.89■□□□□ 0.93
LDB1-202ENST00000425280 YTHDF2Q9Y5A9 579 aaKnown RBP20.89■□□□□ 0.93
LDB1-202ENST00000425280 ZNF727A8MUV8 499 aa20.89■□□□□ 0.93
LDB1-202ENST00000425280 BPIFB3P59826 476 aa20.89■□□□□ 0.93
LDB1-202ENST00000425280 KIAA0141Q14154 515 aaPredicted RBP20.89■□□□□ 0.93
LDB1-202ENST00000425280 PQLC2Q6ZP29 291 aa20.89■□□□□ 0.93
LDB1-202ENST00000425280 LRRC75A-AS1Q8N1F1 130 aa20.89■□□□□ 0.93
LDB1-202ENST00000425280 RBM14Q96PK6 669 aaKnown RBP20.89■□□□□ 0.93
LDB1-202ENST00000425280 CENPEQ02224 2701 aa20.88■□□□□ 0.93
LDB1-202ENST00000425280 CLN5O75503 358 aa20.88■□□□□ 0.93
LDB1-202ENST00000425280 RPUSD4Q96CM3 377 aaKnown RBP20.88■□□□□ 0.93
LDB1-202ENST00000425280 FAM167A-AS1Q96KT0 104 aa20.88■□□□□ 0.93
LDB1-202ENST00000425280 ABCA1O95477 2261 aa20.88■□□□□ 0.93
LDB1-202ENST00000425280 TRAV5A0A0B4J249 113 aa20.87■□□□□ 0.93
LDB1-202ENST00000425280 PDE6DO43924 150 aa20.87■□□□□ 0.93
LDB1-202ENST00000425280 NPPCP23582 126 aa20.87■□□□□ 0.93
LDB1-202ENST00000425280 TMEM219Q86XT9 240 aa20.87■□□□□ 0.93
LDB1-202ENST00000425280 C5orf56Q8N8D9 126 aa20.87■□□□□ 0.93
LDB1-202ENST00000425280 MAPK1IP1LQ8NDC0 245 aa20.87■□□□□ 0.93
LDB1-202ENST00000425280 SMIM7Q9BQ49 75 aa20.87■□□□□ 0.93
LDB1-202ENST00000425280 TXNDC17Q9BRA2 123 aa20.87■□□□□ 0.93
LDB1-202ENST00000425280 SLC25A2Q9BXI2 301 aa20.87■□□□□ 0.93
LDB1-202ENST00000425280 PARLQ9H300 379 aa20.87■□□□□ 0.93
LDB1-202ENST00000425280 OR7C2O60412 319 aa20.87■□□□□ 0.93
LDB1-202ENST00000425280 LOXL1Q08397 574 aaPredicted RBP20.87■□□□□ 0.93
LDB1-202ENST00000425280 ZNF674Q2M3X9 581 aa20.87■□□□□ 0.93
LDB1-202ENST00000425280 OR5T1Q8NG75 326 aa20.87■□□□□ 0.93
LDB1-202ENST00000425280 UHRF2Q96PU4 802 aa20.87■□□□□ 0.93
LDB1-202ENST00000425280 SDF2L1Q9HCN8 221 aa20.87■□□□□ 0.93
LDB1-202ENST00000425280 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP20.86■□□□□ 0.933e-7■■■□□ 16.4
LDB1-202ENST00000425280 OR51G1Q8NGK1 321 aa20.86■□□□□ 0.93
LDB1-202ENST00000425280 SGMS2Q8NHU3 365 aa20.86■□□□□ 0.93
LDB1-202ENST00000425280 SSX3Q99909 188 aa20.86■□□□□ 0.93
LDB1-202ENST00000425280 TMEM167BQ9NRX6 74 aa20.86■□□□□ 0.93
LDB1-202ENST00000425280 MAP1AP78559 2803 aaPredicted RBP20.86■□□□□ 0.93
LDB1-202ENST00000425280 RNF223E7ERA6 249 aa20.85■□□□□ 0.93
LDB1-202ENST00000425280 TIGITQ495A1 244 aa20.85■□□□□ 0.93
LDB1-202ENST00000425280 ZNF355PQ9NSJ1 428 aa20.85■□□□□ 0.93
LDB1-202ENST00000425280 CSMD1Q96PZ7 3565 aa20.85■□□□□ 0.93
LDB1-202ENST00000425280 ELOA3CA0A087WX78 387 aaPredicted RBP20.85■□□□□ 0.93
LDB1-202ENST00000425280 SH2D7A6NKC9 451 aaPredicted RBP20.85■□□□□ 0.93
LDB1-202ENST00000425280 ORM2P19652 201 aa20.85■□□□□ 0.93
LDB1-202ENST00000425280 OR1B1Q8NGR6 318 aa20.85■□□□□ 0.93
LDB1-202ENST00000425280 MOB4Q9Y3A3 225 aa20.85■□□□□ 0.93
LDB1-202ENST00000425280 F6UZH7 168 aa20.84■□□□□ 0.93
LDB1-202ENST00000425280 ATP6V0E1O15342 81 aa20.84■□□□□ 0.93
LDB1-202ENST00000425280 IGKV1-17P01599 117 aa20.84■□□□□ 0.93
LDB1-202ENST00000425280 Q5PR19 223 aa20.84■□□□□ 0.93
LDB1-202ENST00000425280 TENM4Q6N022 2769 aa20.84■□□□□ 0.93
LDB1-202ENST00000425280 PNRC1Q12796 327 aaPredicted RBP20.84■□□□□ 0.93
LDB1-202ENST00000425280 OR5AU1Q8NGC0 362 aa20.84■□□□□ 0.93
LDB1-202ENST00000425280 OR10J4P0C629 311 aa20.83■□□□□ 0.93
LDB1-202ENST00000425280 PSG1P11464 419 aa20.83■□□□□ 0.93
LDB1-202ENST00000425280 PLP1P60201 277 aa20.83■□□□□ 0.93
LDB1-202ENST00000425280 LINC00305Q7Z4B0 112 aa20.83■□□□□ 0.93
LDB1-202ENST00000425280 NAT8Q9UHE5 227 aa20.83■□□□□ 0.93
LDB1-202ENST00000425280 S4R3C0 116 aa20.83■□□□□ 0.93
LDB1-202ENST00000425280 ARL2-SNX15V9GYD0 113 aa20.83■□□□□ 0.93
LDB1-202ENST00000425280 LINC01548A6NM66 108 aa20.82■□□□□ 0.92
LDB1-202ENST00000425280 TMEM241Q24JQ0 296 aa20.82■□□□□ 0.92
LDB1-202ENST00000425280 UNQ5815/PRO19632Q6UWF5 114 aa20.82■□□□□ 0.92
LDB1-202ENST00000425280 FAM110DQ8TAY7 271 aaPredicted RBP20.82■□□□□ 0.92
LDB1-202ENST00000425280 PSMG3-AS1Q96PY0 264 aa20.82■□□□□ 0.92
LDB1-202ENST00000425280 TMUB1Q9BVT8 246 aa20.82■□□□□ 0.92
LDB1-202ENST00000425280 TUBA4BQ9H853 241 aa20.82■□□□□ 0.92
LDB1-202ENST00000425280 ABCA12Q86UK0 2595 aa20.81■□□□□ 0.92
LDB1-202ENST00000425280 HYPMO75409 117 aa20.81■□□□□ 0.92
LDB1-202ENST00000425280 NDUFB8O95169 186 aa20.81■□□□□ 0.92
LDB1-202ENST00000425280 TGFAP01135 160 aa20.81■□□□□ 0.92
LDB1-202ENST00000425280 AMY1AP04745 511 aa20.81■□□□□ 0.92
LDB1-202ENST00000425280 ECSCRQ19T08 205 aa20.81■□□□□ 0.92
LDB1-202ENST00000425280 CELSR1Q9NYQ6 3014 aa20.81■□□□□ 0.92
LDB1-202ENST00000425280 A0A087WWC5 75 aa20.81■□□□□ 0.92
LDB1-202ENST00000425280 J3QLI3 93 aa20.81■□□□□ 0.92
LDB1-202ENST00000425280 HIST2H2BCQ6DN03 193 aa20.81■□□□□ 0.92
LDB1-202ENST00000425280 THYN1Q9P016 225 aa20.81■□□□□ 0.92
LDB1-202ENST00000425280 DOPEY2Q9Y3R5 2298 aa20.8■□□□□ 0.92
LDB1-202ENST00000425280 COLCA2A8K830 154 aa20.8■□□□□ 0.92
LDB1-202ENST00000425280 B4DEV8 164 aa20.8■□□□□ 0.92
LDB1-202ENST00000425280 OR2J3O76001 311 aa20.8■□□□□ 0.92
LDB1-202ENST00000425280 NDUFB4O95168 129 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms