RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 TMEM106BQ9NUM4 274 aa8.63□□□□□ -1.03
CUX1-205ENST00000425244 IGHV3-72A0A0B4J1Y9 119 aa8.62□□□□□ -1.03
CUX1-205ENST00000425244 A0A1W2PN81 502 aa8.62□□□□□ -1.03
CUX1-205ENST00000425244 A1L4Q6 167 aa8.62□□□□□ -1.03
CUX1-205ENST00000425244 B9A039 149 aa8.62□□□□□ -1.03
CUX1-205ENST00000425244 NDUFS8O00217 210 aa8.62□□□□□ -1.03
CUX1-205ENST00000425244 SPINK4O60575 86 aa8.62□□□□□ -1.03
CUX1-205ENST00000425244 CD69Q07108 199 aa8.62□□□□□ -1.03
CUX1-205ENST00000425244 PQLC2Q6ZP29 291 aa8.62□□□□□ -1.03
CUX1-205ENST00000425244 TMEM256Q8N2U0 113 aa8.62□□□□□ -1.03
CUX1-205ENST00000425244 OR1L8Q8NGR8 309 aa8.62□□□□□ -1.03
CUX1-205ENST00000425244 EAF1Q96JC9 268 aaPredicted RBP8.62□□□□□ -1.03
CUX1-205ENST00000425244 SLC35E1Q96K37 410 aa8.62□□□□□ -1.03
CUX1-205ENST00000425244 TMEM167BQ9NRX6 74 aa8.62□□□□□ -1.03
CUX1-205ENST00000425244 RPH3ALQ9UNE2 315 aa8.62□□□□□ -1.03
CUX1-205ENST00000425244 KMT2BQ9UMN6 2715 aaPredicted RBP8.62□□□□□ -1.03
CUX1-205ENST00000425244 CELSR1Q9NYQ6 3014 aa8.62□□□□□ -1.03
CUX1-205ENST00000425244 TRAV5A0A0B4J249 113 aa8.62□□□□□ -1.03
CUX1-205ENST00000425244 HELTA6NFD8 242 aa8.62□□□□□ -1.03
CUX1-205ENST00000425244 ENSAO43768 121 aaKnown RBP8.62□□□□□ -1.03
CUX1-205ENST00000425244 REG1AP05451 166 aa8.62□□□□□ -1.03
CUX1-205ENST00000425244 ADMP35318 185 aa8.62□□□□□ -1.03
CUX1-205ENST00000425244 PDLIM4P50479 330 aa8.62□□□□□ -1.03
CUX1-205ENST00000425244 SUMO1P63165 101 aaKnown RBP8.62□□□□□ -1.03
CUX1-205ENST00000425244 SSBP2P81877 361 aaPredicted RBP8.62□□□□□ -1.03
CUX1-205ENST00000425244 C11orf52Q96A22 123 aa8.62□□□□□ -1.03
CUX1-205ENST00000425244 ZNF503Q96F45 646 aa8.62□□□□□ -1.03
CUX1-205ENST00000425244 BTF3L4Q96K17 158 aa8.62□□□□□ -1.03
CUX1-205ENST00000425244 CBLN4Q9NTU7 201 aa8.62□□□□□ -1.03
CUX1-205ENST00000425244 FNDC10F2Z333 226 aa8.61□□□□□ -1.03
CUX1-205ENST00000425244 DLX1P56177 255 aa8.61□□□□□ -1.03
CUX1-205ENST00000425244 TAS2R45P59539 299 aa8.61□□□□□ -1.03
CUX1-205ENST00000425244 SMIM15Q7Z3B0 74 aa8.61□□□□□ -1.03
CUX1-205ENST00000425244 OR5AN1Q8NGI8 311 aa8.61□□□□□ -1.03
CUX1-205ENST00000425244 RNASEH2CQ8TDP1 164 aaKnown RBP8.61□□□□□ -1.03
CUX1-205ENST00000425244 NDUFA4L2Q9NRX3 87 aa8.61□□□□□ -1.03
CUX1-205ENST00000425244 IL36BQ9NZH7 164 aa8.61□□□□□ -1.03
CUX1-205ENST00000425244 CTSZQ9UBR2 303 aa8.61□□□□□ -1.03
CUX1-205ENST00000425244 GGTLC3B5MD39 225 aa8.61□□□□□ -1.03
CUX1-205ENST00000425244 SLC25A17O43808 307 aa8.61□□□□□ -1.03
CUX1-205ENST00000425244 APELAP0DMC3 54 aa8.61□□□□□ -1.03
CUX1-205ENST00000425244 LOXP28300 417 aaPredicted RBP8.61□□□□□ -1.03
CUX1-205ENST00000425244 FXYD3Q14802 87 aa8.61□□□□□ -1.03
CUX1-205ENST00000425244 MORN5Q5VZ52 161 aa8.61□□□□□ -1.03
CUX1-205ENST00000425244 GBGT1Q8N5D6 347 aa8.61□□□□□ -1.03
CUX1-205ENST00000425244 NUDT10Q8NFP7 164 aa8.61□□□□□ -1.03
CUX1-205ENST00000425244 OR4C13Q8NGP0 309 aa8.61□□□□□ -1.03
CUX1-205ENST00000425244 RNASE7Q9H1E1 156 aaKnown RBP8.61□□□□□ -1.03
CUX1-205ENST00000425244 NBPF19A0A087WUL8 3843 aa8.61□□□□□ -1.03
CUX1-205ENST00000425244 TMEM238C9JI98 176 aa8.61□□□□□ -1.03
CUX1-205ENST00000425244 NUPR1O60356 82 aa8.61□□□□□ -1.03
CUX1-205ENST00000425244 FRMD6-AS1P0C7T7 363 aa8.61□□□□□ -1.03
CUX1-205ENST00000425244 MGST1P10620 155 aaKnown RBP8.61□□□□□ -1.03
CUX1-205ENST00000425244 AREGP15514 252 aa8.61□□□□□ -1.03
CUX1-205ENST00000425244 IER3P46695 156 aa8.61□□□□□ -1.03
CUX1-205ENST00000425244 TCL1AP56279 114 aa8.61□□□□□ -1.03
CUX1-205ENST00000425244 UBE2L3P68036 154 aaKnown RBP8.61□□□□□ -1.03
CUX1-205ENST00000425244 SLC35B1P78383 322 aa8.61□□□□□ -1.03
CUX1-205ENST00000425244 WT1-ASQ06250 92 aa8.61□□□□□ -1.03
CUX1-205ENST00000425244 OR1L6Q8NGR2 347 aa8.61□□□□□ -1.03
CUX1-205ENST00000425244 ZNF430Q9H8G1 570 aaPredicted RBP8.61□□□□□ -1.03
CUX1-205ENST00000425244 LPAR2Q9HBW0 351 aa8.61□□□□□ -1.03
CUX1-205ENST00000425244 TPSG1Q9NRR2 321 aa8.61□□□□□ -1.03
CUX1-205ENST00000425244 IGHV1-69-2A0A0G2JMI3 117 aa8.6□□□□□ -1.03
CUX1-205ENST00000425244 C9JCJ5 164 aa8.6□□□□□ -1.03
CUX1-205ENST00000425244 C8orf88P0DMB2 117 aa8.6□□□□□ -1.03
CUX1-205ENST00000425244 USF1P22415 310 aaPredicted RBP8.6□□□□□ -1.03
CUX1-205ENST00000425244 CDKN1AP38936 164 aa8.6□□□□□ -1.03
CUX1-205ENST00000425244 RPEL1Q2QD12 228 aa8.6□□□□□ -1.03
CUX1-205ENST00000425244 TIGITQ495A1 244 aa8.6□□□□□ -1.03
CUX1-205ENST00000425244 TMEM177Q53S58 311 aa8.6□□□□□ -1.03
CUX1-205ENST00000425244 ASPHD1Q5U4P2 390 aa8.6□□□□□ -1.03
CUX1-205ENST00000425244 MMD2Q8IY49 270 aa8.6□□□□□ -1.03
CUX1-205ENST00000425244 OR8I2Q8N0Y5 310 aa8.6□□□□□ -1.03
CUX1-205ENST00000425244 NHLRC2Q8NBF2 726 aa8.6□□□□□ -1.03
CUX1-205ENST00000425244 NPIPB3Q92617 1050 aa8.6□□□□□ -1.03
CUX1-205ENST00000425244 MALRD1Q5VYJ5 2156 aa8.6□□□□□ -1.03
CUX1-205ENST00000425244 COX7A2P2O60397 106 aa8.6□□□□□ -1.03
CUX1-205ENST00000425244 SCGB1D1O95968 90 aa8.6□□□□□ -1.03
CUX1-205ENST00000425244 OR5G3P0C626 314 aa8.6□□□□□ -1.03
CUX1-205ENST00000425244 OR5AU1Q8NGC0 362 aa8.6□□□□□ -1.03
CUX1-205ENST00000425244 RITA1Q96K30 269 aa8.6□□□□□ -1.03
CUX1-205ENST00000425244 MRPL18Q9H0U6 180 aaKnown RBP8.6□□□□□ -1.03
CUX1-205ENST00000425244 SERTAD4Q9NUC0 356 aa8.6□□□□□ -1.03
CUX1-205ENST00000425244 WASHC3Q9Y3C0 194 aa8.6□□□□□ -1.03
CUX1-205ENST00000425244 MED13LQ71F56 2210 aa8.59□□□□□ -1.03
CUX1-205ENST00000425244 POLQO75417 2590 aa8.59□□□□□ -1.03
CUX1-205ENST00000425244 FCN1O00602 326 aa8.59□□□□□ -1.03
CUX1-205ENST00000425244 PYYP10082 97 aa8.59□□□□□ -1.03
CUX1-205ENST00000425244 HCP5Q6MZN7 132 aa8.59□□□□□ -1.03
CUX1-205ENST00000425244 WDR73Q6P4I2 378 aa8.59□□□□□ -1.03
CUX1-205ENST00000425244 MRPL52Q86TS9 123 aaKnown RBP8.59□□□□□ -1.03
CUX1-205ENST00000425244 SLC25A33Q9BSK2 321 aa8.59□□□□□ -1.03
CUX1-205ENST00000425244 FNDC4Q9H6D8 234 aaPredicted RBP8.59□□□□□ -1.03
CUX1-205ENST00000425244 DNAJC4Q9NNZ3 241 aa8.59□□□□□ -1.03
CUX1-205ENST00000425244 J3KRW8 73 aa8.59□□□□□ -1.03
CUX1-205ENST00000425244 GOSR1O95249 250 aa8.59□□□□□ -1.03
CUX1-205ENST00000425244 GCGP01275 180 aa8.59□□□□□ -1.03
CUX1-205ENST00000425244 ATP5IP56385 69 aaPredicted RBP8.59□□□□□ -1.03
CUX1-205ENST00000425244 LEMD1Q68G75 181 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms