RNA–Protein interactions for RNA: ENST00000423463.6

VPS13A-208, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,702 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-208ENST00000423463 THOC7Q6I9Y2 204 aaKnown RBP1.89□□□□□ -2.11
VPS13A-208ENST00000423463 SSX9Q7RTT3 188 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 HSD17B13Q7Z5P4 300 aaPredicted RBP1.89□□□□□ -2.11
VPS13A-208ENST00000423463 Q8N402 240 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 TOMM5Q8N4H5 51 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 TTC9CQ8N5M4 171 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 KLHL30-AS1Q8NEE0 82 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 OR5T1Q8NG75 326 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 OR4D10Q8NGI6 311 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 OR51S1Q8NGJ8 323 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 OR4C16Q8NGL9 310 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 OR1L8Q8NGR8 309 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 MARCH1Q8TCQ1 289 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 C4orf3Q8WVX3 66 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 SRSF12Q8WXF0 261 aaKnown RBP1.89□□□□□ -2.11
VPS13A-208ENST00000423463 USMG5Q96IX5 58 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 P2RX4Q99571 388 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 TSC22D3Q99576 134 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 PHB2Q99623 299 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 OPRPNQ99935 248 aaPredicted RBP1.89□□□□□ -2.11
VPS13A-208ENST00000423463 FAM103A1Q9BTL3 118 aaKnown RBP1.89□□□□□ -2.11
VPS13A-208ENST00000423463 MCRIP2Q9BUT9 160 aaKnown RBP1.89□□□□□ -2.11
VPS13A-208ENST00000423463 GPR61Q9BZJ8 451 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 COMMD5Q9GZQ3 224 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 SRRQ9GZT4 340 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 HRASLSQ9HDD0 168 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 SLC2A9Q9NRM0 540 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 SLC2A8Q9NY64 477 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 FKBP11Q9NYL4 201 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 COPZ2Q9P299 210 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 KLK9Q9UKQ9 250 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 PRNDQ9UKY0 176 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 C14orf166Q9Y224 244 aaKnown RBP1.89□□□□□ -2.11
VPS13A-208ENST00000423463 PIGBOS1A0A0B4J2F0 54 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 C3orf85A0A1B0GTC6 90 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 NAP1L6A6NFF2 107 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 H0Y980 276 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 I3L521 148 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 SOX15O60248 233 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 S1PR2O95136 353 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 DHFRP00374 187 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 KRASP01116 189 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 TRGV3P03979 118 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 HSPB1P04792 205 aaKnown RBP1.89□□□□□ -2.11
VPS13A-208ENST00000423463 CRYGCP07315 174 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 LGALS1P09382 135 aaKnown RBP1.89□□□□□ -2.11
VPS13A-208ENST00000423463 TRAPPC2P0DI81 140 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 TRAPPC2BP0DI82 140 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 HIST1H1BP16401 226 aaKnown RBP1.89□□□□□ -2.11
VPS13A-208ENST00000423463 RPL35AP18077 110 aaKnown RBP1.89□□□□□ -2.11
VPS13A-208ENST00000423463 UCP1P25874 307 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 INPP1P49441 399 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 KRTAP10-12P60413 245 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 ZNF79Q15937 498 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 IDO2Q6ZQW0 420 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 H2BFWTQ7Z2G1 175 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 VKORC1L1Q8N0U8 176 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 OR1N2Q8NGR9 330 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 OR13C8Q8NGS7 320 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 OR5B3Q8NH48 314 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 SEC22AQ96IW7 307 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 ATP6V0BQ99437 205 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 SLC25A21Q9BQT8 299 aaPredicted RBP1.89□□□□□ -2.11
VPS13A-208ENST00000423463 RTBDNQ9BSG5 229 aaPredicted RBP1.89□□□□□ -2.11
VPS13A-208ENST00000423463 TMEM222Q9H0R3 208 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 ZNF355PQ9NSJ1 428 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 ZMAT5Q9UDW3 170 aaKnown RBP1.89□□□□□ -2.11
VPS13A-208ENST00000423463 ZNF257Q9Y2Q1 563 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 KCNIP3Q9Y2W7 256 aa1.89□□□□□ -2.11
VPS13A-208ENST00000423463 ZFHX3Q15911 3703 aa1.88□□□□□ -2.11
VPS13A-208ENST00000423463 VPS13CQ709C8 3753 aa1.88□□□□□ -2.11
VPS13A-208ENST00000423463 TRBV9A0A0B4J1U6 114 aa1.88□□□□□ -2.11
VPS13A-208ENST00000423463 TRAV3A0A0B4J244 114 aa1.88□□□□□ -2.11
VPS13A-208ENST00000423463 TEX50A0A1B0GTY4 177 aa1.88□□□□□ -2.11
VPS13A-208ENST00000423463 CRYM-AS1A6NIL9 109 aa1.88□□□□□ -2.11
VPS13A-208ENST00000423463 FAM223BA6NKX1 122 aa1.88□□□□□ -2.11
VPS13A-208ENST00000423463 CENPXA8MT69 81 aa1.88□□□□□ -2.11
VPS13A-208ENST00000423463 E5RGE8 158 aa1.88□□□□□ -2.11
VPS13A-208ENST00000423463 LINC01619G3V211 115 aa1.88□□□□□ -2.11
VPS13A-208ENST00000423463 CYB5BO43169 146 aa1.88□□□□□ -2.11
VPS13A-208ENST00000423463 SAP30O75446 220 aa1.88□□□□□ -2.11
VPS13A-208ENST00000423463 CDS2O95674 445 aa1.88□□□□□ -2.11
VPS13A-208ENST00000423463 IGKV1-39P01597 117 aa1.88□□□□□ -2.11
VPS13A-208ENST00000423463 IGKV1D-39P04432 117 aa1.88□□□□□ -2.11
VPS13A-208ENST00000423463 OR8U8P0C7N1 319 aa1.88□□□□□ -2.11
VPS13A-208ENST00000423463 PSMB6P28072 239 aa1.88□□□□□ -2.11
VPS13A-208ENST00000423463 G6PCP35575 357 aa1.88□□□□□ -2.11
VPS13A-208ENST00000423463 TPPP2P59282 170 aa1.88□□□□□ -2.11
VPS13A-208ENST00000423463 OR2B8PP59922 312 aa1.88□□□□□ -2.11
VPS13A-208ENST00000423463 HSPE1P61604 102 aaKnown RBP1.88□□□□□ -2.11
VPS13A-208ENST00000423463 ATP5G2Q06055 141 aa1.88□□□□□ -2.11
VPS13A-208ENST00000423463 ZNF616Q08AN1 781 aa1.88□□□□□ -2.11
VPS13A-208ENST00000423463 CNPY1Q3B7I2 92 aa1.88□□□□□ -2.11
VPS13A-208ENST00000423463 C10orf55Q5SWW7 151 aa1.88□□□□□ -2.11
VPS13A-208ENST00000423463 TRIQKQ629K1 86 aa1.88□□□□□ -2.11
VPS13A-208ENST00000423463 ZNF57Q68EA5 555 aaPredicted RBP1.88□□□□□ -2.11
VPS13A-208ENST00000423463 FAAP20Q6NZ36 180 aa1.88□□□□□ -2.11
VPS13A-208ENST00000423463 ZNF343Q6P1L6 599 aa1.88□□□□□ -2.11
VPS13A-208ENST00000423463 Q6ZRP5 223 aa1.88□□□□□ -2.11
VPS13A-208ENST00000423463 FAM223AQ8IWN6 122 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms