RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 PRSS54Q6PEW0 395 aa18.77■□□□□ 0.6
SMDT1-202ENST00000422252 OR1S2Q8NGQ3 325 aa18.77■□□□□ 0.6
SMDT1-202ENST00000422252 PLECQ15149 4684 aaKnown RBP18.77■□□□□ 0.59
SMDT1-202ENST00000422252 IGLC1P0CG04 106 aa18.76■□□□□ 0.59
SMDT1-202ENST00000422252 ATF4P18848 351 aaPredicted RBP18.76■□□□□ 0.59
SMDT1-202ENST00000422252 RND2P52198 227 aa18.76■□□□□ 0.59
SMDT1-202ENST00000422252 NMSQ5H8A3 153 aa18.76■□□□□ 0.59
SMDT1-202ENST00000422252 TMEM170AQ8WVE7 144 aa18.76■□□□□ 0.59
SMDT1-202ENST00000422252 NARS2Q96I59 477 aaKnown RBP18.76■□□□□ 0.59
SMDT1-202ENST00000422252 RABAC1Q9UI14 185 aa18.76■□□□□ 0.59
SMDT1-202ENST00000422252 A0A0B4J2A0 478 aa18.75■□□□□ 0.59
SMDT1-202ENST00000422252 NPY1RP25929 384 aa18.75■□□□□ 0.59
SMDT1-202ENST00000422252 CCR6P51684 374 aa18.75■□□□□ 0.59
SMDT1-202ENST00000422252 DEFB131AP59861 70 aa18.75■□□□□ 0.59
SMDT1-202ENST00000422252 SUPT4H1P63272 117 aaKnown RBP18.75■□□□□ 0.59
SMDT1-202ENST00000422252 ETFRF1Q6IPR1 90 aa18.75■□□□□ 0.59
SMDT1-202ENST00000422252 NOXA1Q86UR1 476 aa18.75■□□□□ 0.59
SMDT1-202ENST00000422252 FAM24BQ8N5W8 94 aa18.75■□□□□ 0.59
SMDT1-202ENST00000422252 TMEM217Q8N7C4 229 aa18.75■□□□□ 0.59
SMDT1-202ENST00000422252 GATAD1Q8WUU5 269 aa18.75■□□□□ 0.59
SMDT1-202ENST00000422252 SHPKQ9UHJ6 478 aa18.75■□□□□ 0.59
SMDT1-202ENST00000422252 HYDINQ4G0P3 5121 aa18.75■□□□□ 0.59
SMDT1-202ENST00000422252 ANXA3P12429 323 aa18.74■□□□□ 0.59
SMDT1-202ENST00000422252 OR10J1P30954 320 aa18.74■□□□□ 0.59
SMDT1-202ENST00000422252 FAUP35544 74 aaKnown RBP18.74■□□□□ 0.59
SMDT1-202ENST00000422252 P2RY1P47900 373 aa18.74■□□□□ 0.59
SMDT1-202ENST00000422252 LEMD1Q68G75 181 aa18.74■□□□□ 0.59
SMDT1-202ENST00000422252 LYZL2Q7Z4W2 148 aa18.74■□□□□ 0.59
SMDT1-202ENST00000422252 ALMS1Q8TCU4 4167 aa18.74■□□□□ 0.59
SMDT1-202ENST00000422252 NUPR2A6NF83 97 aa18.73■□□□□ 0.59
SMDT1-202ENST00000422252 YPEL3P61236 119 aaPredicted RBP18.73■□□□□ 0.59
SMDT1-202ENST00000422252 SRPXP78539 464 aa18.73■□□□□ 0.59
SMDT1-202ENST00000422252 KLF9Q13886 244 aaPredicted RBP18.73■□□□□ 0.59
SMDT1-202ENST00000422252 SMCO1Q147U7 214 aa18.73■□□□□ 0.59
SMDT1-202ENST00000422252 LGI3Q8N145 548 aa18.73■□□□□ 0.59
SMDT1-202ENST00000422252 STXBP6Q8NFX7 210 aa18.73■□□□□ 0.59
SMDT1-202ENST00000422252 Q8WTZ3 238 aa18.73■□□□□ 0.59
SMDT1-202ENST00000422252 GRAMD2BQ96HH9 432 aa18.73■□□□□ 0.59
SMDT1-202ENST00000422252 HSPB7Q9UBY9 170 aa18.73■□□□□ 0.59
SMDT1-202ENST00000422252 AP3S2P59780 193 aa18.72■□□□□ 0.59
SMDT1-202ENST00000422252 RBMS2Q15434 407 aaKnown RBP18.72■□□□□ 0.59
SMDT1-202ENST00000422252 PYDC2Q56P42 97 aa18.72■□□□□ 0.59
SMDT1-202ENST00000422252 TRIM63Q969Q1 353 aa18.72■□□□□ 0.59
SMDT1-202ENST00000422252 RARRES2Q99969 163 aa18.72■□□□□ 0.59
SMDT1-202ENST00000422252 U3KQ87 197 aa18.72■□□□□ 0.59
SMDT1-202ENST00000422252 U3KQE9 123 aa18.72■□□□□ 0.59
SMDT1-202ENST00000422252 K7EQG2 157 aa18.71■□□□□ 0.59
SMDT1-202ENST00000422252 CA1P00915 261 aaPredicted RBP18.71■□□□□ 0.59
SMDT1-202ENST00000422252 IFNA10P01566 189 aa18.71■□□□□ 0.59
SMDT1-202ENST00000422252 TOMM5Q8N4H5 51 aa18.71■□□□□ 0.59
SMDT1-202ENST00000422252 DTD1Q8TEA8 209 aa18.71■□□□□ 0.59
SMDT1-202ENST00000422252 NPIPB3Q92617 1050 aa18.71■□□□□ 0.59
SMDT1-202ENST00000422252 RBKSQ9H477 322 aa18.71■□□□□ 0.59
SMDT1-202ENST00000422252 V9GYH0 126 aa18.71■□□□□ 0.59
SMDT1-202ENST00000422252 HNRNPCP07910 306 aaKnown RBP eCLIP18.7■□□□□ 0.58
SMDT1-202ENST00000422252 STHQ8IWL8 128 aa18.7■□□□□ 0.58
SMDT1-202ENST00000422252 PIGBOS1A0A0B4J2F0 54 aa18.69■□□□□ 0.58
SMDT1-202ENST00000422252 CCDC160A6NGH7 325 aa18.69■□□□□ 0.58
SMDT1-202ENST00000422252 EIF2B2P49770 351 aaKnown RBP18.69■□□□□ 0.58
SMDT1-202ENST00000422252 CEMP1Q6PRD7 247 aaPredicted RBP18.69■□□□□ 0.58
SMDT1-202ENST00000422252 TMED4Q7Z7H5 227 aa18.69■□□□□ 0.58
SMDT1-202ENST00000422252 ACY3Q96HD9 319 aa18.69■□□□□ 0.58
SMDT1-202ENST00000422252 HELTA6NFD8 242 aa18.68■□□□□ 0.58
SMDT1-202ENST00000422252 IL4P05112 153 aa18.68■□□□□ 0.58
SMDT1-202ENST00000422252 S100A5P33763 92 aa18.68■□□□□ 0.58
SMDT1-202ENST00000422252 TMEM128Q5BJH2 165 aa18.68■□□□□ 0.58
SMDT1-202ENST00000422252 C16orf54Q6UWD8 224 aa18.68■□□□□ 0.58
SMDT1-202ENST00000422252 OR11H2Q8NH07 326 aa18.68■□□□□ 0.58
SMDT1-202ENST00000422252 OR1S1Q8NH92 325 aa18.68■□□□□ 0.58
SMDT1-202ENST00000422252 DCANP1Q8TF63 244 aa18.68■□□□□ 0.58
SMDT1-202ENST00000422252 DUXBA0A1W2PPF3 345 aa18.67■□□□□ 0.58
SMDT1-202ENST00000422252 TOMM40O96008 361 aa18.67■□□□□ 0.58
SMDT1-202ENST00000422252 USF2Q15853 346 aaPredicted RBP18.67■□□□□ 0.58
SMDT1-202ENST00000422252 ZNF79Q15937 498 aa18.67■□□□□ 0.58
SMDT1-202ENST00000422252 GLMPQ8WWB7 406 aa18.67■□□□□ 0.58
SMDT1-202ENST00000422252 LINC00476Q8WZB0 136 aa18.67■□□□□ 0.58
SMDT1-202ENST00000422252 ZNF688P0C7X2 276 aa18.66■□□□□ 0.58
SMDT1-202ENST00000422252 RD3LP0DJH9 198 aa18.66■□□□□ 0.58
SMDT1-202ENST00000422252 AP2S1P53680 142 aaPredicted RBP18.66■□□□□ 0.58
SMDT1-202ENST00000422252 DEDD2Q8WXF8 326 aa18.66■□□□□ 0.58
SMDT1-202ENST00000422252 IFNA4P05014 189 aa18.65■□□□□ 0.58
SMDT1-202ENST00000422252 ATP5IP56385 69 aaPredicted RBP18.65■□□□□ 0.58
SMDT1-202ENST00000422252 DHRS2Q13268 280 aa18.65■□□□□ 0.58
SMDT1-202ENST00000422252 TRPT1Q86TN4 253 aaKnown RBP18.65■□□□□ 0.58
SMDT1-202ENST00000422252 C11orf68Q9H3H3 251 aaKnown RBP18.65■□□□□ 0.58
SMDT1-202ENST00000422252 KLK5Q9Y337 293 aaPredicted RBP18.65■□□□□ 0.58
SMDT1-202ENST00000422252 CCDC190Q86UF4 302 aa18.64■□□□□ 0.57
SMDT1-202ENST00000422252 SLC25A21Q9BQT8 299 aaPredicted RBP18.64■□□□□ 0.57
SMDT1-202ENST00000422252 KNCNA6PVL3 124 aa18.63■□□□□ 0.57
SMDT1-202ENST00000422252 PITX3O75364 302 aa18.63■□□□□ 0.57
SMDT1-202ENST00000422252 PSG1P11464 419 aa18.63■□□□□ 0.57
SMDT1-202ENST00000422252 VAMP1P23763 118 aa18.63■□□□□ 0.57
SMDT1-202ENST00000422252 LRTM2Q8N967 370 aa18.63■□□□□ 0.57
SMDT1-202ENST00000422252 EPPK1P58107 5090 aaKnown RBP18.63■□□□□ 0.57
SMDT1-202ENST00000422252 BUB3O43684 328 aa18.62■□□□□ 0.57
SMDT1-202ENST00000422252 GPX4P36969 197 aaPredicted RBP18.62■□□□□ 0.57
SMDT1-202ENST00000422252 MORN3Q6PF18 240 aaPredicted RBP18.62■□□□□ 0.57
SMDT1-202ENST00000422252 OR51G1Q8NGK1 321 aa18.62■□□□□ 0.57
SMDT1-202ENST00000422252 PHLDA1Q8WV24 401 aaPredicted RBP18.62■□□□□ 0.57
SMDT1-202ENST00000422252 RBM38Q9H0Z9 239 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms