RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 OR1B1Q8NGR6 318 aa8.81□□□□□ -1
DDX56-203ENST00000421223 BLNKQ8WV28 456 aa8.81□□□□□ -1
DDX56-203ENST00000421223 TIMD4Q96H15 378 aa8.81□□□□□ -1
DDX56-203ENST00000421223 PYGO2Q9BRQ0 406 aa8.81□□□□□ -1
DDX56-203ENST00000421223 SLC25A33Q9BSK2 321 aa8.81□□□□□ -1
DDX56-203ENST00000421223 FAM103A1Q9BTL3 118 aaKnown RBP8.81□□□□□ -1
DDX56-203ENST00000421223 ACACBO00763 2458 aa8.81□□□□□ -1
DDX56-203ENST00000421223 UBE2L3P68036 154 aaKnown RBP8.81□□□□□ -1
DDX56-203ENST00000421223 ZNF841Q6ZN19 808 aa8.81□□□□□ -1
DDX56-203ENST00000421223 BUB1B-PAK6H3BSN5 160 aa8.8□□□□□ -1
DDX56-203ENST00000421223 SLC35B1P78383 322 aa8.8□□□□□ -1
DDX56-203ENST00000421223 MMDQ15546 238 aa8.8□□□□□ -1
DDX56-203ENST00000421223 KCNIP4Q6PIL6 250 aa8.8□□□□□ -1
DDX56-203ENST00000421223 PRO1933Q9H354 126 aa8.8□□□□□ -1
DDX56-203ENST00000421223 UBTD1Q9HAC8 227 aa8.8□□□□□ -1
DDX56-203ENST00000421223 DNAJC4Q9NNZ3 241 aa8.8□□□□□ -1
DDX56-203ENST00000421223 SERTAD4Q9NUC0 356 aa8.8□□□□□ -1
DDX56-203ENST00000421223 HELTA6NFD8 242 aa8.8□□□□□ -1
DDX56-203ENST00000421223 ERVFC1-1P60608 527 aa8.8□□□□□ -1
DDX56-203ENST00000421223 LEMD1Q68G75 181 aa8.8□□□□□ -1
DDX56-203ENST00000421223 PQLC2Q6ZP29 291 aa8.8□□□□□ -1
DDX56-203ENST00000421223 ANAPC16Q96DE5 110 aa8.8□□□□□ -1
DDX56-203ENST00000421223 SFRP2Q96HF1 295 aa8.8□□□□□ -1
DDX56-203ENST00000421223 LINC00479Q96M42 142 aa8.8□□□□□ -1
DDX56-203ENST00000421223 TIMM23O14925 209 aa8.8□□□□□ -1
DDX56-203ENST00000421223 TOX4O94842 621 aa8.8□□□□□ -1
DDX56-203ENST00000421223 LGALS7P47929 136 aa8.8□□□□□ -1
DDX56-203ENST00000421223 TAS2R45P59539 299 aa8.8□□□□□ -1
DDX56-203ENST00000421223 FXYD3Q14802 87 aa8.8□□□□□ -1
DDX56-203ENST00000421223 LINC00311Q8N616 119 aa8.8□□□□□ -1
DDX56-203ENST00000421223 OR10G8Q8NGN5 311 aa8.8□□□□□ -1
DDX56-203ENST00000421223 ZNF355PQ9NSJ1 428 aa8.8□□□□□ -1
DDX56-203ENST00000421223 ZFYVE26Q68DK2 2539 aa8.8□□□□□ -1
DDX56-203ENST00000421223 VENTXO95231 258 aa8.79□□□□□ -1
DDX56-203ENST00000421223 LIPFP07098 398 aa8.79□□□□□ -1
DDX56-203ENST00000421223 C8orf88P0DMB2 117 aa8.79□□□□□ -1
DDX56-203ENST00000421223 UQCRFS1P47985 274 aa8.79□□□□□ -1
DDX56-203ENST00000421223 TCL1AP56279 114 aa8.79□□□□□ -1
DDX56-203ENST00000421223 RANP62826 216 aaKnown RBP8.79□□□□□ -1
DDX56-203ENST00000421223 C10orf113Q5VZT2 155 aa8.79□□□□□ -1
DDX56-203ENST00000421223 PPP1R27Q86WC6 154 aa8.79□□□□□ -1
DDX56-203ENST00000421223 TNFRSF19Q9NS68 423 aa8.79□□□□□ -1
DDX56-203ENST00000421223 ITPR1Q14643 2758 aa8.79□□□□□ -1
DDX56-203ENST00000421223 TRAV34A0A0B4J273 112 aa8.79□□□□□ -1
DDX56-203ENST00000421223 XKRY2A2RUG3 117 aa8.79□□□□□ -1
DDX56-203ENST00000421223 GNG4P50150 75 aa8.79□□□□□ -1
DDX56-203ENST00000421223 RAB4BP61018 213 aa8.79□□□□□ -1
DDX56-203ENST00000421223 MMD2Q8IY49 270 aa8.79□□□□□ -1
DDX56-203ENST00000421223 ZNF503Q96F45 646 aa8.79□□□□□ -1
DDX56-203ENST00000421223 SRD5A3Q9H8P0 318 aa8.79□□□□□ -1
DDX56-203ENST00000421223 LPAR2Q9HBW0 351 aa8.79□□□□□ -1
DDX56-203ENST00000421223 SIGLEC9Q9Y336 463 aa8.79□□□□□ -1
DDX56-203ENST00000421223 NDUFS8O00217 210 aa8.78□□□□□ -1
DDX56-203ENST00000421223 IGLV1-47P01700 117 aa8.78□□□□□ -1
DDX56-203ENST00000421223 CENPWQ5EE01 88 aa8.78□□□□□ -1
DDX56-203ENST00000421223 KLF17Q5JT82 389 aaPredicted RBP8.78□□□□□ -1
DDX56-203ENST00000421223 TMEM167BQ9NRX6 74 aa8.78□□□□□ -1
DDX56-203ENST00000421223 RBP4P02753 201 aa8.78□□□□□ -1
DDX56-203ENST00000421223 RAB4AP20338 218 aa8.78□□□□□ -1
DDX56-203ENST00000421223 LDLRAD2Q5SZI1 272 aa8.78□□□□□ -1
DDX56-203ENST00000421223 LINC00305Q7Z4B0 112 aa8.78□□□□□ -1
DDX56-203ENST00000421223 CACNG8Q8WXS5 425 aa8.78□□□□□ -1
DDX56-203ENST00000421223 RNASE7Q9H1E1 156 aaKnown RBP8.78□□□□□ -1
DDX56-203ENST00000421223 CBLN4Q9NTU7 201 aa8.78□□□□□ -1
DDX56-203ENST00000421223 LOC105371242A0A075B767 164 aa8.78□□□□□ -1
DDX56-203ENST00000421223 NCBP2LA6PVI3 153 aaKnown RBP8.78□□□□□ -1
DDX56-203ENST00000421223 GGTLC3B5MD39 225 aa8.78□□□□□ -1
DDX56-203ENST00000421223 K7EN84 100 aa8.78□□□□□ -1
DDX56-203ENST00000421223 HTR1DP28221 377 aa8.78□□□□□ -1
DDX56-203ENST00000421223 MFAP2P55001 183 aa8.78□□□□□ -1
DDX56-203ENST00000421223 DNLZQ5SXM8 178 aa8.78□□□□□ -1
DDX56-203ENST00000421223 PRR27Q6MZM9 219 aa8.78□□□□□ -1
DDX56-203ENST00000421223 KIR3DL3Q8N743 410 aa8.78□□□□□ -1
DDX56-203ENST00000421223 ZNF596Q8TC21 504 aa8.78□□□□□ -1
DDX56-203ENST00000421223 WFDC12Q8WWY7 111 aa8.78□□□□□ -1
DDX56-203ENST00000421223 PRDM13Q9H4Q3 707 aa8.78□□□□□ -1
DDX56-203ENST00000421223 TRAPPC1Q9Y5R8 145 aa8.78□□□□□ -1
DDX56-203ENST00000421223 A0A1B0GUS0 222 aa8.77□□□□□ -1.01
DDX56-203ENST00000421223 A0A1W2PPR1 153 aa8.77□□□□□ -1.01
DDX56-203ENST00000421223 IGLC7A0M8Q6 106 aa8.77□□□□□ -1.01
DDX56-203ENST00000421223 LCN2P80188 198 aa8.77□□□□□ -1.01
DDX56-203ENST00000421223 C22orf15Q8WYQ4 148 aa8.77□□□□□ -1.01
DDX56-203ENST00000421223 IMMP2LQ96T52 175 aa8.77□□□□□ -1.01
DDX56-203ENST00000421223 PAXXQ9BUH6 204 aa8.77□□□□□ -1.01
DDX56-203ENST00000421223 PITPNC1Q9UKF7 332 aa8.77□□□□□ -1.01
DDX56-203ENST00000421223 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.77□□□□□ -1.012e-7■■■□□ 17.6
DDX56-203ENST00000421223 TMEM249Q2WGJ8 235 aa8.77□□□□□ -1.01
DDX56-203ENST00000421223 FBXL19-AS1Q494R0 122 aa8.77□□□□□ -1.01
DDX56-203ENST00000421223 TEX38Q6PEX7 206 aa8.77□□□□□ -1.01
DDX56-203ENST00000421223 OR4A5Q8NH83 315 aa8.77□□□□□ -1.01
DDX56-203ENST00000421223 SRSF12Q8WXF0 261 aaKnown RBP8.77□□□□□ -1.01
DDX56-203ENST00000421223 HIST1H2BLQ99880 126 aa8.77□□□□□ -1.01
DDX56-203ENST00000421223 SSBP3Q9BWW4 388 aaPredicted RBP8.77□□□□□ -1.01
DDX56-203ENST00000421223 A0A087X0M5 115 aa8.76□□□□□ -1.01
DDX56-203ENST00000421223 A0A1B0GX30 115 aa8.76□□□□□ -1.01
DDX56-203ENST00000421223 TCRBV4S1A1TA0A5B7 111 aa8.76□□□□□ -1.01
DDX56-203ENST00000421223 PF4V1P10720 104 aa8.76□□□□□ -1.01
DDX56-203ENST00000421223 HIST1H1BP16401 226 aaKnown RBP8.76□□□□□ -1.01
DDX56-203ENST00000421223 LYZP61626 148 aa8.76□□□□□ -1.01
DDX56-203ENST00000421223 TIGITQ495A1 244 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms