RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 C6orf62Q9GZU0 229 aaPredicted RBP8.11□□□□□ -1.11
SSBP3-206ENST00000420121 MS4A6AQ9H2W1 248 aa8.11□□□□□ -1.11
SSBP3-206ENST00000420121 TRAV2A0A0B4J234 112 aa8.1□□□□□ -1.11
SSBP3-206ENST00000420121 NXPH3O95157 252 aa8.1□□□□□ -1.11
SSBP3-206ENST00000420121 IGLC1P0CG04 106 aa8.1□□□□□ -1.11
SSBP3-206ENST00000420121 HTR2BP41595 481 aa8.1□□□□□ -1.11
SSBP3-206ENST00000420121 NMSQ5H8A3 153 aa8.1□□□□□ -1.11
SSBP3-206ENST00000420121 PRSS54Q6PEW0 395 aa8.1□□□□□ -1.11
SSBP3-206ENST00000420121 IL22RA2Q969J5 263 aa8.1□□□□□ -1.11
SSBP3-206ENST00000420121 TRIM63Q969Q1 353 aa8.1□□□□□ -1.11
SSBP3-206ENST00000420121 ENY2Q9NPA8 101 aa8.1□□□□□ -1.11
SSBP3-206ENST00000420121 RSL24D1Q9UHA3 163 aaKnown RBP8.1□□□□□ -1.11
SSBP3-206ENST00000420121 U3KQE9 123 aa8.1□□□□□ -1.11
SSBP3-206ENST00000420121 CD5P06127 495 aa8.09□□□□□ -1.11
SSBP3-206ENST00000420121 KLF9Q13886 244 aaPredicted RBP8.09□□□□□ -1.11
SSBP3-206ENST00000420121 RBMS2Q15434 407 aaKnown RBP8.09□□□□□ -1.11
SSBP3-206ENST00000420121 SLC24A4Q8NFF2 622 aa8.09□□□□□ -1.11
SSBP3-206ENST00000420121 MCFD2Q8NI22 146 aa8.09□□□□□ -1.11
SSBP3-206ENST00000420121 RNASEH2CQ8TDP1 164 aaKnown RBP8.09□□□□□ -1.11
SSBP3-206ENST00000420121 CSTL1Q9H114 145 aa8.09□□□□□ -1.11
SSBP3-206ENST00000420121 HEYLQ9NQ87 328 aaPredicted RBP8.09□□□□□ -1.11
SSBP3-206ENST00000420121 V9GYH0 126 aa8.09□□□□□ -1.11
SSBP3-206ENST00000420121 KMT2AQ03164 3969 aa8.09□□□□□ -1.11
SSBP3-206ENST00000420121 A0A0B4J2A0 478 aa8.08□□□□□ -1.12
SSBP3-206ENST00000420121 FABP12A6NFH5 140 aa8.08□□□□□ -1.12
SSBP3-206ENST00000420121 CEBPZOSA8MTT3 80 aa8.08□□□□□ -1.12
SSBP3-206ENST00000420121 K7EQG2 157 aa8.08□□□□□ -1.12
SSBP3-206ENST00000420121 JTBO76095 146 aa8.08□□□□□ -1.12
SSBP3-206ENST00000420121 SULT1A3P0DMM9 295 aa8.08□□□□□ -1.12
SSBP3-206ENST00000420121 SULT1A4P0DMN0 295 aa8.08□□□□□ -1.12
SSBP3-206ENST00000420121 NPPCP23582 126 aa8.08□□□□□ -1.12
SSBP3-206ENST00000420121 P2RY1P47900 373 aa8.08□□□□□ -1.12
SSBP3-206ENST00000420121 RND2P52198 227 aa8.08□□□□□ -1.12
SSBP3-206ENST00000420121 CMC4P56277 68 aaPredicted RBP8.08□□□□□ -1.12
SSBP3-206ENST00000420121 DEFB131AP59861 70 aa8.08□□□□□ -1.12
SSBP3-206ENST00000420121 PMS2P11Q13670 270 aa8.08□□□□□ -1.12
SSBP3-206ENST00000420121 ZNF79Q15937 498 aa8.08□□□□□ -1.12
SSBP3-206ENST00000420121 LEMD1Q68G75 181 aa8.08□□□□□ -1.12
SSBP3-206ENST00000420121 LYZL2Q7Z4W2 148 aa8.08□□□□□ -1.12
SSBP3-206ENST00000420121 DCANP1Q8TF63 244 aa8.08□□□□□ -1.12
SSBP3-206ENST00000420121 RBM38Q9H0Z9 239 aaKnown RBP8.08□□□□□ -1.12
SSBP3-206ENST00000420121 HSPB7Q9UBY9 170 aa8.08□□□□□ -1.12
SSBP3-206ENST00000420121 SHPKQ9UHJ6 478 aa8.08□□□□□ -1.12
SSBP3-206ENST00000420121 SCP2D1Q9UJQ7 156 aa8.08□□□□□ -1.12
SSBP3-206ENST00000420121 hCG_2014768A0A024R1R8 64 aa8.07□□□□□ -1.12
SSBP3-206ENST00000420121 TRAV30A0A087WSZ9 112 aa8.07□□□□□ -1.12
SSBP3-206ENST00000420121 MPTX1A8MV57 137 aa8.07□□□□□ -1.12
SSBP3-206ENST00000420121 GHRHP01286 108 aa8.07□□□□□ -1.12
SSBP3-206ENST00000420121 GIG44P09565 113 aaPredicted RBP8.07□□□□□ -1.12
SSBP3-206ENST00000420121 SLC25A4P12235 298 aa8.07□□□□□ -1.12
SSBP3-206ENST00000420121 AKR1C4P17516 323 aa8.07□□□□□ -1.12
SSBP3-206ENST00000420121 NPY1RP25929 384 aa8.07□□□□□ -1.12
SSBP3-206ENST00000420121 YPEL3P61236 119 aaPredicted RBP8.07□□□□□ -1.12
SSBP3-206ENST00000420121 PAFAH1B2P68402 229 aa8.07□□□□□ -1.12
SSBP3-206ENST00000420121 USF2Q15853 346 aaPredicted RBP8.07□□□□□ -1.12
SSBP3-206ENST00000420121 OR1S2Q8NGQ3 325 aa8.07□□□□□ -1.12
SSBP3-206ENST00000420121 GLMPQ8WWB7 406 aa8.07□□□□□ -1.12
SSBP3-206ENST00000420121 LINC00476Q8WZB0 136 aa8.07□□□□□ -1.12
SSBP3-206ENST00000420121 METTL26Q96S19 204 aa8.07□□□□□ -1.12
SSBP3-206ENST00000420121 TMEM231Q9H6L2 316 aa8.07□□□□□ -1.12
SSBP3-206ENST00000420121 MCUBQ9NWR8 336 aa8.07□□□□□ -1.12
SSBP3-206ENST00000420121 KCNIP3Q9Y2W7 256 aa8.07□□□□□ -1.12
SSBP3-206ENST00000420121 RPS10-NUDT3A0A1W2PQS6 291 aa8.06□□□□□ -1.12
SSBP3-206ENST00000420121 A0A1W2PS18 150 aa8.06□□□□□ -1.12
SSBP3-206ENST00000420121 CXorf65A6NEN9 183 aa8.06□□□□□ -1.12
SSBP3-206ENST00000420121 DNASE2O00115 360 aaPredicted RBP8.06□□□□□ -1.12
SSBP3-206ENST00000420121 PITX3O75364 302 aa8.06□□□□□ -1.12
SSBP3-206ENST00000420121 OR10J1P30954 320 aa8.06□□□□□ -1.12
SSBP3-206ENST00000420121 CCR6P51684 374 aa8.06□□□□□ -1.12
SSBP3-206ENST00000420121 SMCO1Q147U7 214 aa8.06□□□□□ -1.12
SSBP3-206ENST00000420121 CEMP1Q6PRD7 247 aaPredicted RBP8.06□□□□□ -1.12
SSBP3-206ENST00000420121 C16orf54Q6UWD8 224 aa8.06□□□□□ -1.12
SSBP3-206ENST00000420121 TRPT1Q86TN4 253 aaKnown RBP8.06□□□□□ -1.12
SSBP3-206ENST00000420121 CCDC190Q86UF4 302 aa8.06□□□□□ -1.12
SSBP3-206ENST00000420121 GATAD1Q8WUU5 269 aa8.06□□□□□ -1.12
SSBP3-206ENST00000420121 NPIPB3Q92617 1050 aa8.06□□□□□ -1.12
SSBP3-206ENST00000420121 GRAMD2BQ96HH9 432 aa8.06□□□□□ -1.12
SSBP3-206ENST00000420121 SCGB3A2Q96PL1 93 aa8.06□□□□□ -1.12
SSBP3-206ENST00000420121 RBKSQ9H477 322 aa8.06□□□□□ -1.12
SSBP3-206ENST00000420121 RABAC1Q9UI14 185 aa8.06□□□□□ -1.12
SSBP3-206ENST00000420121 FRAS1Q86XX4 4008 aa8.06□□□□□ -1.12
SSBP3-206ENST00000420121 IGKV1D-37A0A075B6S9 117 aa8.05□□□□□ -1.12
SSBP3-206ENST00000420121 NUPR2A6NF83 97 aa8.05□□□□□ -1.12
SSBP3-206ENST00000420121 NOL3O60936 208 aaKnown RBP8.05□□□□□ -1.12
SSBP3-206ENST00000420121 CA1P00915 261 aaPredicted RBP8.05□□□□□ -1.12
SSBP3-206ENST00000420121 HNRNPCP07910 306 aaKnown RBP eCLIP8.05□□□□□ -1.12
SSBP3-206ENST00000420121 RPL11P62913 178 aaKnown RBP8.05□□□□□ -1.12
SSBP3-206ENST00000420121 LGI3Q8N145 548 aa8.05□□□□□ -1.12
SSBP3-206ENST00000420121 STXBP6Q8NFX7 210 aa8.05□□□□□ -1.12
SSBP3-206ENST00000420121 DTD1Q8TEA8 209 aa8.05□□□□□ -1.12
SSBP3-206ENST00000420121 RARRES2Q99969 163 aa8.05□□□□□ -1.12
SSBP3-206ENST00000420121 C11orf68Q9H3H3 251 aaKnown RBP8.05□□□□□ -1.12
SSBP3-206ENST00000420121 VPS13DQ5THJ4 4388 aa8.05□□□□□ -1.12
SSBP3-206ENST00000420121 TOMM40O96008 361 aa8.04□□□□□ -1.12
SSBP3-206ENST00000420121 ZNF688P0C7X2 276 aa8.04□□□□□ -1.12
SSBP3-206ENST00000420121 PSG1P11464 419 aa8.04□□□□□ -1.12
SSBP3-206ENST00000420121 C4BPBP20851 252 aa8.04□□□□□ -1.12
SSBP3-206ENST00000420121 PYDC2Q56P42 97 aa8.04□□□□□ -1.12
SSBP3-206ENST00000420121 TMEM128Q5BJH2 165 aa8.04□□□□□ -1.12
SSBP3-206ENST00000420121 LRTM2Q8N967 370 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms