RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 IGFBPL1Q8WX77 278 aa11.6□□□□□ -0.55
HLA-DPA1-242ENST00000419277 LPAR2Q9HBW0 351 aa11.6□□□□□ -0.55
HLA-DPA1-242ENST00000419277 OSTCQ9NRP0 149 aa11.6□□□□□ -0.55
HLA-DPA1-242ENST00000419277 POLR3KQ9Y2Y1 108 aaPredicted RBP11.6□□□□□ -0.55
HLA-DPA1-242ENST00000419277 TRBV9A0A0B4J1U6 114 aa11.6□□□□□ -0.55
HLA-DPA1-242ENST00000419277 IGHV2-70DA0A0C4DH43 119 aa11.6□□□□□ -0.55
HLA-DPA1-242ENST00000419277 GGTLC3B5MD39 225 aa11.6□□□□□ -0.55
HLA-DPA1-242ENST00000419277 TRGC1P0CF51 173 aa11.6□□□□□ -0.55
HLA-DPA1-242ENST00000419277 GATA2P23769 480 aaPredicted RBP11.6□□□□□ -0.55
HLA-DPA1-242ENST00000419277 CNTFRP26992 372 aa11.6□□□□□ -0.55
HLA-DPA1-242ENST00000419277 S100A7P31151 101 aa11.6□□□□□ -0.55
HLA-DPA1-242ENST00000419277 CNN1P51911 297 aaKnown RBP11.6□□□□□ -0.55
HLA-DPA1-242ENST00000419277 HCP5Q6MZN7 132 aa11.6□□□□□ -0.55
HLA-DPA1-242ENST00000419277 ZNF562Q6V9R5 426 aa11.6□□□□□ -0.55
HLA-DPA1-242ENST00000419277 VMO1Q7Z5L0 202 aa11.6□□□□□ -0.55
HLA-DPA1-242ENST00000419277 OCC1Q8TAD7 63 aa11.6□□□□□ -0.55
HLA-DPA1-242ENST00000419277 RBM14Q96PK6 669 aaKnown RBP11.6□□□□□ -0.55
HLA-DPA1-242ENST00000419277 CHRDL1Q9BU40 450 aa11.6□□□□□ -0.55
HLA-DPA1-242ENST00000419277 UBTD1Q9HAC8 227 aa11.6□□□□□ -0.55
HLA-DPA1-242ENST00000419277 IL36BQ9NZH7 164 aa11.6□□□□□ -0.55
HLA-DPA1-242ENST00000419277 THYN1Q9P016 225 aa11.6□□□□□ -0.55
HLA-DPA1-242ENST00000419277 SPTBN1Q01082 2364 aaKnown RBP11.59□□□□□ -0.55
HLA-DPA1-242ENST00000419277 I3L2K1 104 aa11.59□□□□□ -0.55
HLA-DPA1-242ENST00000419277 OVOL3O00110 214 aa11.59□□□□□ -0.55
HLA-DPA1-242ENST00000419277 ISLRO14498 428 aa11.59□□□□□ -0.55
HLA-DPA1-242ENST00000419277 UBE2E1P51965 193 aa11.59□□□□□ -0.55
HLA-DPA1-242ENST00000419277 SSBP2P81877 361 aaPredicted RBP11.59□□□□□ -0.55
HLA-DPA1-242ENST00000419277 ZNF90Q03938 601 aa11.59□□□□□ -0.55
HLA-DPA1-242ENST00000419277 MLANAQ16655 118 aa11.59□□□□□ -0.55
HLA-DPA1-242ENST00000419277 CENPWQ5EE01 88 aa11.59□□□□□ -0.55
HLA-DPA1-242ENST00000419277 SGMS2Q8NHU3 365 aa11.59□□□□□ -0.55
HLA-DPA1-242ENST00000419277 FRZBQ92765 325 aa11.59□□□□□ -0.55
HLA-DPA1-242ENST00000419277 RASL11BQ9BPW5 248 aa11.59□□□□□ -0.55
HLA-DPA1-242ENST00000419277 SIRPDQ9H106 197 aa11.59□□□□□ -0.55
HLA-DPA1-242ENST00000419277 TMEM14CQ9P0S9 112 aa11.59□□□□□ -0.55
HLA-DPA1-242ENST00000419277 NCOR2Q9Y618 2525 aa11.59□□□□□ -0.55
HLA-DPA1-242ENST00000419277 COL6A6A6NMZ7 2263 aa11.59□□□□□ -0.55
HLA-DPA1-242ENST00000419277 CHD8Q9HCK8 2581 aa11.58□□□□□ -0.56
HLA-DPA1-242ENST00000419277 LY6HO94772 140 aa11.58□□□□□ -0.56
HLA-DPA1-242ENST00000419277 REG1AP05451 166 aa11.58□□□□□ -0.56
HLA-DPA1-242ENST00000419277 IGLC1P0CG04 106 aa11.58□□□□□ -0.56
HLA-DPA1-242ENST00000419277 HOXB4P17483 251 aaPredicted RBP11.58□□□□□ -0.56
HLA-DPA1-242ENST00000419277 MFAP2P55001 183 aa11.58□□□□□ -0.56
HLA-DPA1-242ENST00000419277 NDUFA6P56556 154 aa11.58□□□□□ -0.56
HLA-DPA1-242ENST00000419277 Q8N6K4 173 aa11.58□□□□□ -0.56
HLA-DPA1-242ENST00000419277 NDUFS8O00217 210 aa11.57□□□□□ -0.56
HLA-DPA1-242ENST00000419277 CRYBB3P26998 211 aa11.57□□□□□ -0.56
HLA-DPA1-242ENST00000419277 BRS3P32247 399 aa11.57□□□□□ -0.56
HLA-DPA1-242ENST00000419277 SUMO1P63165 101 aaKnown RBP11.57□□□□□ -0.56
HLA-DPA1-242ENST00000419277 PATE2Q6UY27 113 aa11.57□□□□□ -0.56
HLA-DPA1-242ENST00000419277 TMEM183AQ8IXX5 376 aa11.57□□□□□ -0.56
HLA-DPA1-242ENST00000419277 NECAP1Q8NC96 275 aa11.57□□□□□ -0.56
HLA-DPA1-242ENST00000419277 FXYD5Q96DB9 178 aa11.57□□□□□ -0.56
HLA-DPA1-242ENST00000419277 HIGD1AQ9Y241 93 aa11.57□□□□□ -0.56
HLA-DPA1-242ENST00000419277 GCGP01275 180 aa11.57□□□□□ -0.56
HLA-DPA1-242ENST00000419277 MT-ND6P03923 174 aa11.57□□□□□ -0.56
HLA-DPA1-242ENST00000419277 FAM106CPP0CH98 169 aa11.57□□□□□ -0.56
HLA-DPA1-242ENST00000419277 GNLYP22749 145 aa11.57□□□□□ -0.56
HLA-DPA1-242ENST00000419277 PDLIM4P50479 330 aa11.57□□□□□ -0.56
HLA-DPA1-242ENST00000419277 ERVFC1-1P60608 527 aa11.57□□□□□ -0.56
HLA-DPA1-242ENST00000419277 FXYD3Q14802 87 aa11.57□□□□□ -0.56
HLA-DPA1-242ENST00000419277 RPEL1Q2QD12 228 aa11.57□□□□□ -0.56
HLA-DPA1-242ENST00000419277 FAM231DQ6ZW35 169 aa11.57□□□□□ -0.56
HLA-DPA1-242ENST00000419277 ARPC1AQ92747 370 aa11.57□□□□□ -0.56
HLA-DPA1-242ENST00000419277 IGF2BP2-AS1Q96M15 143 aa11.57□□□□□ -0.56
HLA-DPA1-242ENST00000419277 ELOVL1Q9BW60 279 aa11.57□□□□□ -0.56
HLA-DPA1-242ENST00000419277 WNT10AQ9GZT5 417 aa11.57□□□□□ -0.56
HLA-DPA1-242ENST00000419277 A0A1W2PPR1 153 aa11.56□□□□□ -0.56
HLA-DPA1-242ENST00000419277 PEX7O00628 323 aa11.56□□□□□ -0.56
HLA-DPA1-242ENST00000419277 CDKN1AP38936 164 aa11.56□□□□□ -0.56
HLA-DPA1-242ENST00000419277 MYCNOSP40205 109 aa11.56□□□□□ -0.56
HLA-DPA1-242ENST00000419277 YPEL3P61236 119 aaPredicted RBP11.56□□□□□ -0.56
HLA-DPA1-242ENST00000419277 HES1Q14469 280 aa11.56□□□□□ -0.56
HLA-DPA1-242ENST00000419277 LDLRAD2Q5SZI1 272 aa11.56□□□□□ -0.56
HLA-DPA1-242ENST00000419277 HIST3H2BBQ8N257 126 aa11.56□□□□□ -0.56
HLA-DPA1-242ENST00000419277 C5orf17Q8NAS9 161 aa11.56□□□□□ -0.56
HLA-DPA1-242ENST00000419277 OR1B1Q8NGR6 318 aa11.56□□□□□ -0.56
HLA-DPA1-242ENST00000419277 TMEM68Q96MH6 324 aa11.56□□□□□ -0.56
HLA-DPA1-242ENST00000419277 HILPDAQ9Y5L2 63 aa11.56□□□□□ -0.56
HLA-DPA1-242ENST00000419277 K7EN84 100 aa11.55□□□□□ -0.56
HLA-DPA1-242ENST00000419277 PLXNB1O43157 2135 aa11.55□□□□□ -0.56
HLA-DPA1-242ENST00000419277 TOX4O94842 621 aa11.55□□□□□ -0.56
HLA-DPA1-242ENST00000419277 HIST1H1BP16401 226 aaKnown RBP11.55□□□□□ -0.56
HLA-DPA1-242ENST00000419277 PLA2G5P39877 138 aa11.55□□□□□ -0.56
HLA-DPA1-242ENST00000419277 WDR73Q6P4I2 378 aa11.55□□□□□ -0.56
HLA-DPA1-242ENST00000419277 TTC9CQ8N5M4 171 aa11.55□□□□□ -0.56
HLA-DPA1-242ENST00000419277 OR5T1Q8NG75 326 aa11.55□□□□□ -0.56
HLA-DPA1-242ENST00000419277 MRPL36Q9P0J6 103 aaKnown RBP11.55□□□□□ -0.56
HLA-DPA1-242ENST00000419277 A0A0U1RQK1 487 aa11.55□□□□□ -0.56
HLA-DPA1-242ENST00000419277 ZNF320A2RRD8 509 aa11.55□□□□□ -0.56
HLA-DPA1-242ENST00000419277 TOMM40O96008 361 aa11.55□□□□□ -0.56
HLA-DPA1-242ENST00000419277 HLA-DRB1P01911 266 aa11.55□□□□□ -0.56
HLA-DPA1-242ENST00000419277 GP9P14770 177 aa11.55□□□□□ -0.56
HLA-DPA1-242ENST00000419277 ORM2P19652 201 aa11.55□□□□□ -0.56
HLA-DPA1-242ENST00000419277 FCGR2BP31994 310 aaPredicted RBP11.55□□□□□ -0.56
HLA-DPA1-242ENST00000419277 RASL11AQ6T310 242 aa11.55□□□□□ -0.56
HLA-DPA1-242ENST00000419277 ZNF329Q86UD4 541 aa11.55□□□□□ -0.56
HLA-DPA1-242ENST00000419277 TXN2Q99757 166 aa11.55□□□□□ -0.56
HLA-DPA1-242ENST00000419277 KLF12Q9Y4X4 402 aa11.55□□□□□ -0.56
HLA-DPA1-242ENST00000419277 HRNRQ86YZ3 2850 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms