RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 S100A1P23297 94 aa4.69□□□□□ -1.66
HMGB3-202ENST00000419110 S100A7P31151 101 aa4.69□□□□□ -1.66
HMGB3-202ENST00000419110 TAGLN2P37802 199 aaKnown RBP4.69□□□□□ -1.66
HMGB3-202ENST00000419110 RPL29P47914 159 aaKnown RBP4.69□□□□□ -1.66
HMGB3-202ENST00000419110 PPT1P50897 306 aa4.69□□□□□ -1.66
HMGB3-202ENST00000419110 MFAP4P55083 255 aa4.69□□□□□ -1.66
HMGB3-202ENST00000419110 TAS2R45P59539 299 aa4.69□□□□□ -1.66
HMGB3-202ENST00000419110 RHOGP84095 191 aa4.69□□□□□ -1.66
HMGB3-202ENST00000419110 AKIRIN2Q53H80 203 aa4.69□□□□□ -1.66
HMGB3-202ENST00000419110 Q56UQ5 140 aa4.69□□□□□ -1.66
HMGB3-202ENST00000419110 KHDC3LQ587J8 217 aa4.69□□□□□ -1.66
HMGB3-202ENST00000419110 ASPHD1Q5U4P2 390 aa4.69□□□□□ -1.66
HMGB3-202ENST00000419110 UQCC3Q6UW78 93 aa4.69□□□□□ -1.66
HMGB3-202ENST00000419110 Q6YL49 198 aa4.69□□□□□ -1.66
HMGB3-202ENST00000419110 S100A7AQ86SG5 101 aa4.69□□□□□ -1.66
HMGB3-202ENST00000419110 NECAP1Q8NC96 275 aa4.69□□□□□ -1.66
HMGB3-202ENST00000419110 TMEM116Q8NCL8 245 aa4.69□□□□□ -1.66
HMGB3-202ENST00000419110 OR10G4Q8NGN3 311 aa4.69□□□□□ -1.66
HMGB3-202ENST00000419110 OR10G9Q8NGN4 311 aa4.69□□□□□ -1.66
HMGB3-202ENST00000419110 OR10G7Q8NGN6 311 aa4.69□□□□□ -1.66
HMGB3-202ENST00000419110 OR4X1Q8NH49 305 aa4.69□□□□□ -1.66
HMGB3-202ENST00000419110 PIFOQ8TCI5 191 aa4.69□□□□□ -1.66
HMGB3-202ENST00000419110 VN1R17PQ8TDU5 208 aa4.69□□□□□ -1.66
HMGB3-202ENST00000419110 ZNF418Q8TF45 676 aaPredicted RBP4.69□□□□□ -1.66
HMGB3-202ENST00000419110 NPIPB3Q92617 1050 aa4.69□□□□□ -1.66
HMGB3-202ENST00000419110 EEF1AKMT3Q96AZ1 226 aa4.69□□□□□ -1.66
HMGB3-202ENST00000419110 NARS2Q96I59 477 aaKnown RBP4.69□□□□□ -1.66
HMGB3-202ENST00000419110 CITED4Q96RK1 184 aa4.69□□□□□ -1.66
HMGB3-202ENST00000419110 TRGV9Q99603 122 aa4.69□□□□□ -1.66
HMGB3-202ENST00000419110 PRSS22Q9GZN4 317 aa4.69□□□□□ -1.66
HMGB3-202ENST00000419110 MANBALQ9NQG1 85 aa4.69□□□□□ -1.66
HMGB3-202ENST00000419110 RPRMQ9NS64 109 aa4.69□□□□□ -1.66
HMGB3-202ENST00000419110 TNFRSF19Q9NS68 423 aa4.69□□□□□ -1.66
HMGB3-202ENST00000419110 GAR1Q9NY12 217 aaKnown RBP4.69□□□□□ -1.66
HMGB3-202ENST00000419110 C21orf62Q9NYP8 219 aa4.69□□□□□ -1.66
HMGB3-202ENST00000419110 FBXL7Q9UJT9 491 aa4.69□□□□□ -1.66
HMGB3-202ENST00000419110 CDC42EP3Q9UKI2 254 aa4.69□□□□□ -1.66
HMGB3-202ENST00000419110 SOX21Q9Y651 276 aaPredicted RBP4.69□□□□□ -1.66
HMGB3-202ENST00000419110 HIVEP2P31629 2446 aa4.69□□□□□ -1.66
HMGB3-202ENST00000419110 ACANP16112 2415 aa4.68□□□□□ -1.66
HMGB3-202ENST00000419110 VPS13CQ709C8 3753 aa4.68□□□□□ -1.66
HMGB3-202ENST00000419110 TEX15Q9BXT5 2789 aa4.68□□□□□ -1.66
HMGB3-202ENST00000419110 IGKV1OR2-108A0A075B7D4 117 aa4.68□□□□□ -1.66
HMGB3-202ENST00000419110 TRAV30A0A087WSZ9 112 aa4.68□□□□□ -1.66
HMGB3-202ENST00000419110 IGHV3-21A0A0B4J1V1 117 aa4.68□□□□□ -1.66
HMGB3-202ENST00000419110 TRAV1-1A0A0B4J248 108 aa4.68□□□□□ -1.66
HMGB3-202ENST00000419110 MFSD2BA6NFX1 497 aa4.68□□□□□ -1.66
HMGB3-202ENST00000419110 DNAJC9-AS1A6NH13 148 aa4.68□□□□□ -1.66
HMGB3-202ENST00000419110 K7EIM0 57 aa4.68□□□□□ -1.66
HMGB3-202ENST00000419110 CLN5O75503 358 aa4.68□□□□□ -1.66
HMGB3-202ENST00000419110 IGHV3-48P01763 117 aa4.68□□□□□ -1.66
HMGB3-202ENST00000419110 TRGV3P03979 118 aa4.68□□□□□ -1.66
HMGB3-202ENST00000419110 AMY1AP04745 511 aa4.68□□□□□ -1.66
HMGB3-202ENST00000419110 IGLC1P0CG04 106 aa4.68□□□□□ -1.66
HMGB3-202ENST00000419110 ZP3P21754 424 aa4.68□□□□□ -1.66
HMGB3-202ENST00000419110 FHITP49789 147 aa4.68□□□□□ -1.66
HMGB3-202ENST00000419110 TPPP2P59282 170 aa4.68□□□□□ -1.66
HMGB3-202ENST00000419110 LYZP61626 148 aa4.68□□□□□ -1.66
HMGB3-202ENST00000419110 SLC35B1P78383 322 aa4.68□□□□□ -1.66
HMGB3-202ENST00000419110 C15orf32Q32M92 178 aa4.68□□□□□ -1.66
HMGB3-202ENST00000419110 TOR2AQ5JU69 321 aa4.68□□□□□ -1.66
HMGB3-202ENST00000419110 FAM209BQ5JX69 171 aa4.68□□□□□ -1.66
HMGB3-202ENST00000419110 LCN15Q6UWW0 184 aa4.68□□□□□ -1.66
HMGB3-202ENST00000419110 Q6ZS46 218 aa4.68□□□□□ -1.66
HMGB3-202ENST00000419110 SLC7A5P1Q8MH63 180 aa4.68□□□□□ -1.66
HMGB3-202ENST00000419110 OR5T1Q8NG75 326 aa4.68□□□□□ -1.66
HMGB3-202ENST00000419110 OR2T6Q8NHC8 308 aa4.68□□□□□ -1.66
HMGB3-202ENST00000419110 SFT2D1Q8WV19 159 aa4.68□□□□□ -1.66
HMGB3-202ENST00000419110 JMJD8Q96S16 334 aa4.68□□□□□ -1.66
HMGB3-202ENST00000419110 C19orf24Q9BVV8 132 aa4.68□□□□□ -1.66
HMGB3-202ENST00000419110 PRDM13Q9H4Q3 707 aa4.68□□□□□ -1.66
HMGB3-202ENST00000419110 SLC45A2Q9UMX9 530 aa4.68□□□□□ -1.66
HMGB3-202ENST00000419110 DMRT1Q9Y5R6 373 aa4.68□□□□□ -1.66
HMGB3-202ENST00000419110 AKAP9Q99996 3911 aa4.68□□□□□ -1.66
HMGB3-202ENST00000419110 NOTCH2Q04721 2471 aa4.68□□□□□ -1.66
HMGB3-202ENST00000419110 BAHCC1Q9P281 2608 aa4.68□□□□□ -1.66
HMGB3-202ENST00000419110 G3V318 75 aa4.67□□□□□ -1.66
HMGB3-202ENST00000419110 NUPL2O15504 423 aaKnown RBP4.67□□□□□ -1.66
HMGB3-202ENST00000419110 OR7C2O60412 319 aa4.67□□□□□ -1.66
HMGB3-202ENST00000419110 YIF1AO95070 293 aa4.67□□□□□ -1.66
HMGB3-202ENST00000419110 CXorf1O96002 111 aa4.67□□□□□ -1.66
HMGB3-202ENST00000419110 TOMM40O96008 361 aa4.67□□□□□ -1.66
HMGB3-202ENST00000419110 OR5G3P0C626 314 aa4.67□□□□□ -1.66
HMGB3-202ENST00000419110 ARL14EPLP0DKL9 152 aa4.67□□□□□ -1.66
HMGB3-202ENST00000419110 BCL2P10415 239 aa4.67□□□□□ -1.66
HMGB3-202ENST00000419110 PF4V1P10720 104 aa4.67□□□□□ -1.66
HMGB3-202ENST00000419110 EGR2P11161 476 aaPredicted RBP4.67□□□□□ -1.66
HMGB3-202ENST00000419110 FCGR2BP31994 310 aaPredicted RBP4.67□□□□□ -1.66
HMGB3-202ENST00000419110 GPR183P32249 361 aa4.67□□□□□ -1.66
HMGB3-202ENST00000419110 RPL15P61313 204 aaKnown RBP4.67□□□□□ -1.66
HMGB3-202ENST00000419110 UBE2L3P68036 154 aaKnown RBP4.67□□□□□ -1.66
HMGB3-202ENST00000419110 DEFA5Q01523 94 aa4.67□□□□□ -1.66
HMGB3-202ENST00000419110 TMEM95Q3KNT9 176 aa4.67□□□□□ -1.66
HMGB3-202ENST00000419110 TIGITQ495A1 244 aa4.67□□□□□ -1.66
HMGB3-202ENST00000419110 C19orf54Q5BKX5 351 aa4.67□□□□□ -1.66
HMGB3-202ENST00000419110 C10orf113Q5VZT2 155 aa4.67□□□□□ -1.66
HMGB3-202ENST00000419110 EIF4E3Q8N5X7 224 aaKnown RBP4.67□□□□□ -1.66
HMGB3-202ENST00000419110 LYPD6BQ8NI32 183 aa4.67□□□□□ -1.66
HMGB3-202ENST00000419110 GATAD1Q8WUU5 269 aa4.67□□□□□ -1.66
HMGB3-202ENST00000419110 RAB24Q969Q5 203 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms