RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 SONP18583 2426 aaKnown RBP16.32■□□□□ 0.2
CASC3-203ENST00000418132 IGF1P05019 195 aa16.31■□□□□ 0.2
CASC3-203ENST00000418132 OR10J1P30954 320 aa16.31■□□□□ 0.2
CASC3-203ENST00000418132 PRR20EP86478 221 aa16.31■□□□□ 0.2
CASC3-203ENST00000418132 PRR20CP86479 221 aa16.31■□□□□ 0.2
CASC3-203ENST00000418132 PRR20DP86480 221 aa16.31■□□□□ 0.2
CASC3-203ENST00000418132 PRR20BP86481 221 aa16.31■□□□□ 0.2
CASC3-203ENST00000418132 PRR20AP86496 221 aa16.31■□□□□ 0.2
CASC3-203ENST00000418132 ZNF726P1Q15940 193 aa16.31■□□□□ 0.2
CASC3-203ENST00000418132 C19orf54Q5BKX5 351 aa16.31■□□□□ 0.2
CASC3-203ENST00000418132 RPP25LQ8N5L8 163 aaKnown RBP16.31■□□□□ 0.2
CASC3-203ENST00000418132 IGKV1D-37A0A075B6S9 117 aa16.31■□□□□ 0.2
CASC3-203ENST00000418132 IGHV3-21A0A0B4J1V1 117 aa16.31■□□□□ 0.2
CASC3-203ENST00000418132 G3V318 75 aa16.31■□□□□ 0.2
CASC3-203ENST00000418132 C9orf152Q5JTZ5 239 aa16.31■□□□□ 0.2
CASC3-203ENST00000418132 SLC35E3Q7Z769 313 aa16.31■□□□□ 0.2
CASC3-203ENST00000418132 HOXA3O43365 443 aaPredicted RBP16.3■□□□□ 0.2
CASC3-203ENST00000418132 YIF1AO95070 293 aa16.3■□□□□ 0.2
CASC3-203ENST00000418132 SRP14P37108 136 aaKnown RBP16.3■□□□□ 0.2
CASC3-203ENST00000418132 B2MP61769 119 aa16.3■□□□□ 0.2
CASC3-203ENST00000418132 ACOT6Q3I5F7 207 aaPredicted RBP16.3■□□□□ 0.2
CASC3-203ENST00000418132 SSX7Q7RTT5 188 aa16.3■□□□□ 0.2
CASC3-203ENST00000418132 STPG3Q8N7X2 389 aa16.3■□□□□ 0.2
CASC3-203ENST00000418132 MBD3L1Q8WWY6 194 aa16.3■□□□□ 0.2
CASC3-203ENST00000418132 THYN1Q9P016 225 aa16.3■□□□□ 0.2
CASC3-203ENST00000418132 LINC00869P0C866 280 aa16.29■□□□□ 0.2
CASC3-203ENST00000418132 HIST1H1BP16401 226 aaKnown RBP16.29■□□□□ 0.2
CASC3-203ENST00000418132 OR10G4Q8NGN3 311 aa16.29■□□□□ 0.2
CASC3-203ENST00000418132 OR10G9Q8NGN4 311 aa16.29■□□□□ 0.2
CASC3-203ENST00000418132 OR10G7Q8NGN6 311 aa16.29■□□□□ 0.2
CASC3-203ENST00000418132 OR4X1Q8NH49 305 aa16.29■□□□□ 0.2
CASC3-203ENST00000418132 RCC1LQ96I51 464 aaKnown RBP16.29■□□□□ 0.2
CASC3-203ENST00000418132 SLC39A9Q9NUM3 307 aa16.29■□□□□ 0.2
CASC3-203ENST00000418132 TRAV41A0A0B4J266 112 aa16.29■□□□□ 0.2
CASC3-203ENST00000418132 LCN15Q6UWW0 184 aa16.29■□□□□ 0.2
CASC3-203ENST00000418132 SIGLECL1Q8N7X8 197 aa16.29■□□□□ 0.2
CASC3-203ENST00000418132 TCRBV4S1A1TA0A5B7 111 aa16.28■□□□□ 0.2
CASC3-203ENST00000418132 ICAM4Q14773 271 aa16.28■□□□□ 0.2
CASC3-203ENST00000418132 ZNF506Q5JVG8 444 aa16.28■□□□□ 0.2
CASC3-203ENST00000418132 Q6ZS46 218 aa16.28■□□□□ 0.2
CASC3-203ENST00000418132 CYP2G1PQ6ZSU1 146 aa16.28■□□□□ 0.2
CASC3-203ENST00000418132 TNFRSF19Q9NS68 423 aa16.28■□□□□ 0.2
CASC3-203ENST00000418132 TMEM160Q9NX00 188 aa16.28■□□□□ 0.2
CASC3-203ENST00000418132 ZFP92A6NM28 416 aa16.27■□□□□ 0.2
CASC3-203ENST00000418132 HNF1AP20823 631 aa16.27■□□□□ 0.2
CASC3-203ENST00000418132 GCSAMLQ5JQS6 135 aa16.27■□□□□ 0.2
CASC3-203ENST00000418132 TRGV9Q99603 122 aa16.27■□□□□ 0.2
CASC3-203ENST00000418132 FLNBO75369 2602 aaKnown RBP16.27■□□□□ 0.2
CASC3-203ENST00000418132 TRBV9A0A0B4J1U6 114 aa16.27■□□□□ 0.19
CASC3-203ENST00000418132 SRP19P09132 144 aaKnown RBP16.27■□□□□ 0.19
CASC3-203ENST00000418132 FGF8P55075 233 aaPredicted RBP16.27■□□□□ 0.19
CASC3-203ENST00000418132 SOHLH1Q5JUK2 328 aa16.27■□□□□ 0.19
CASC3-203ENST00000418132 RXFP4Q8TDU9 374 aa16.27■□□□□ 0.19
CASC3-203ENST00000418132 ZNF580Q9UK33 172 aa16.27■□□□□ 0.19
CASC3-203ENST00000418132 SEC14L6B5MCN3 397 aa16.26■□□□□ 0.19
CASC3-203ENST00000418132 OR2J3O76001 311 aa16.26■□□□□ 0.19
CASC3-203ENST00000418132 NDUFB8O95169 186 aa16.26■□□□□ 0.19
CASC3-203ENST00000418132 GATA2P23769 480 aaPredicted RBP16.26■□□□□ 0.19
CASC3-203ENST00000418132 SELENOTP62341 195 aa16.26■□□□□ 0.19
CASC3-203ENST00000418132 GNG13Q9P2W3 67 aa16.26■□□□□ 0.19
CASC3-203ENST00000418132 LINC00527Q9UJ94 153 aa16.26■□□□□ 0.19
CASC3-203ENST00000418132 CTXND1A0A1B0GTU2 59 aa16.26■□□□□ 0.19
CASC3-203ENST00000418132 AP4M1O00189 453 aa16.26■□□□□ 0.19
CASC3-203ENST00000418132 CLN5O75503 358 aa16.26■□□□□ 0.19
CASC3-203ENST00000418132 HSPB1P04792 205 aaKnown RBP16.26■□□□□ 0.19
CASC3-203ENST00000418132 IGLC1P0CG04 106 aa16.26■□□□□ 0.19
CASC3-203ENST00000418132 ZNF90Q03938 601 aa16.26■□□□□ 0.19
CASC3-203ENST00000418132 AWAT1Q58HT5 328 aa16.26■□□□□ 0.19
CASC3-203ENST00000418132 TMEM86BQ8N661 226 aa16.26■□□□□ 0.19
CASC3-203ENST00000418132 ACTR3CQ9C0K3 210 aaPredicted RBP16.26■□□□□ 0.19
CASC3-203ENST00000418132 FBXL7Q9UJT9 491 aa16.26■□□□□ 0.19
CASC3-203ENST00000418132 AKR1C3P42330 323 aa16.25■□□□□ 0.19
CASC3-203ENST00000418132 KHDC3LQ587J8 217 aa16.25■□□□□ 0.19
CASC3-203ENST00000418132 FAM122CQ6P4D5 195 aa16.25■□□□□ 0.19
CASC3-203ENST00000418132 C20orf24Q9BUV8 137 aa16.25■□□□□ 0.19
CASC3-203ENST00000418132 LOC102723971A0A1B0GUV8 181 aa16.24■□□□□ 0.19
CASC3-203ENST00000418132 M0R036 132 aa16.24■□□□□ 0.19
CASC3-203ENST00000418132 EIF3GO75821 320 aaKnown RBP eCLIP16.24■□□□□ 0.19
CASC3-203ENST00000418132 PPIFP30405 207 aaKnown RBP16.24■□□□□ 0.19
CASC3-203ENST00000418132 RAB24Q969Q5 203 aa16.24■□□□□ 0.19
CASC3-203ENST00000418132 SMR3AQ99954 134 aa16.24■□□□□ 0.19
CASC3-203ENST00000418132 SLC25A22Q9H936 323 aa16.24■□□□□ 0.19
CASC3-203ENST00000418132 RPS10P5Q9NQ39 176 aa16.24■□□□□ 0.19
CASC3-203ENST00000418132 C7orf77A4D0Y5 90 aa16.24■□□□□ 0.19
CASC3-203ENST00000418132 MAP1LC3B2A6NCE7 125 aa16.24■□□□□ 0.19
CASC3-203ENST00000418132 CDC34P49427 236 aaPredicted RBP16.24■□□□□ 0.19
CASC3-203ENST00000418132 MFAP4P55083 255 aa16.24■□□□□ 0.19
CASC3-203ENST00000418132 VN1R17PQ8TDU5 208 aa16.24■□□□□ 0.19
CASC3-203ENST00000418132 NOL4LQ96MY1 436 aaPredicted RBP16.24■□□□□ 0.19
CASC3-203ENST00000418132 MAP1LC3BQ9GZQ8 125 aa16.24■□□□□ 0.19
CASC3-203ENST00000418132 GSX1Q9H4S2 264 aaPredicted RBP16.24■□□□□ 0.19
CASC3-203ENST00000418132 ZNF355PQ9NSJ1 428 aa16.24■□□□□ 0.19
CASC3-203ENST00000418132 C21orf62Q9NYP8 219 aa16.24■□□□□ 0.19
CASC3-203ENST00000418132 BRI3O95415 125 aa16.23■□□□□ 0.19
CASC3-203ENST00000418132 CEBPGP53567 150 aa16.23■□□□□ 0.19
CASC3-203ENST00000418132 RHOGP84095 191 aa16.23■□□□□ 0.19
CASC3-203ENST00000418132 NECAP1Q8NC96 275 aa16.23■□□□□ 0.19
CASC3-203ENST00000418132 F8W735 103 aaPredicted RBP16.22■□□□□ 0.19
CASC3-203ENST00000418132 CYB561D1Q8N8Q1 229 aa16.22■□□□□ 0.19
CASC3-203ENST00000418132 C19orf24Q9BVV8 132 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms