RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 TEX50A0A1B0GTY4 177 aa10.77□□□□□ -0.68
TNFRSF8-203ENST00000417814 CCL25O15444 150 aa10.77□□□□□ -0.68
TNFRSF8-203ENST00000417814 RBX1P62877 108 aa10.77□□□□□ -0.68
TNFRSF8-203ENST00000417814 VAMP3Q15836 100 aa10.77□□□□□ -0.68
TNFRSF8-203ENST00000417814 NAA38Q9BRA0 125 aaKnown RBP10.77□□□□□ -0.68
TNFRSF8-203ENST00000417814 ALKBH7Q9BT30 221 aaPredicted RBP10.77□□□□□ -0.68
TNFRSF8-203ENST00000417814 KBTBD11-OT1A0A1B0GTJ5 212 aa10.77□□□□□ -0.69
TNFRSF8-203ENST00000417814 C15orf61A6NNL5 157 aa10.77□□□□□ -0.69
TNFRSF8-203ENST00000417814 SRRM5B3KS81 715 aa10.77□□□□□ -0.69
TNFRSF8-203ENST00000417814 FAM87AP0C7U9 286 aa10.77□□□□□ -0.69
TNFRSF8-203ENST00000417814 VDAC2P45880 294 aaPredicted RBP10.77□□□□□ -0.69
TNFRSF8-203ENST00000417814 AARDQ4LEZ3 155 aa10.77□□□□□ -0.69
TNFRSF8-203ENST00000417814 C10orf113Q5VZT2 155 aa10.77□□□□□ -0.69
TNFRSF8-203ENST00000417814 OR8B2Q96RD0 313 aa10.77□□□□□ -0.69
TNFRSF8-203ENST00000417814 WNK1Q9H4A3 2382 aa10.77□□□□□ -0.69
TNFRSF8-203ENST00000417814 VENTXO95231 258 aa10.77□□□□□ -0.69
TNFRSF8-203ENST00000417814 RPL19P84098 196 aaKnown RBP10.77□□□□□ -0.69
TNFRSF8-203ENST00000417814 LINC00305Q7Z4B0 112 aa10.77□□□□□ -0.69
TNFRSF8-203ENST00000417814 PRNTQ86SH4 94 aa10.77□□□□□ -0.69
TNFRSF8-203ENST00000417814 OR1L4Q8NGR5 311 aa10.77□□□□□ -0.69
TNFRSF8-203ENST00000417814 CORO2AQ92828 525 aa10.77□□□□□ -0.69
TNFRSF8-203ENST00000417814 TNFSF13O75888 250 aa10.76□□□□□ -0.69
TNFRSF8-203ENST00000417814 RPL15P61313 204 aaKnown RBP10.76□□□□□ -0.69
TNFRSF8-203ENST00000417814 SLAQ13239 276 aa10.76□□□□□ -0.69
TNFRSF8-203ENST00000417814 SRSF7Q16629 238 aaKnown RBP eCLIP10.76□□□□□ -0.69
TNFRSF8-203ENST00000417814 COA6Q5JTJ3 125 aaKnown RBP10.76□□□□□ -0.69
TNFRSF8-203ENST00000417814 OR52E5Q8NH55 327 aa10.76□□□□□ -0.69
TNFRSF8-203ENST00000417814 DEFB104AQ8WTQ1 72 aa10.76□□□□□ -0.69
TNFRSF8-203ENST00000417814 MRPL36Q9P0J6 103 aaKnown RBP10.76□□□□□ -0.69
TNFRSF8-203ENST00000417814 SS18L1O75177 396 aaPredicted RBP10.76□□□□□ -0.69
TNFRSF8-203ENST00000417814 IGKV3-15P01624 115 aa10.76□□□□□ -0.69
TNFRSF8-203ENST00000417814 CT45A6P0DMU7 189 aa10.76□□□□□ -0.69
TNFRSF8-203ENST00000417814 CT45A5P0DMU8 189 aa10.76□□□□□ -0.69
TNFRSF8-203ENST00000417814 CT45A7P0DMV0 189 aa10.76□□□□□ -0.69
TNFRSF8-203ENST00000417814 LOXL3P58215 753 aa10.76□□□□□ -0.69
TNFRSF8-203ENST00000417814 TAS2R45P59539 299 aa10.76□□□□□ -0.69
TNFRSF8-203ENST00000417814 IGFL4Q6B9Z1 124 aa10.76□□□□□ -0.69
TNFRSF8-203ENST00000417814 STPG4Q8N801 248 aa10.76□□□□□ -0.69
TNFRSF8-203ENST00000417814 FAM222BQ8WU58 562 aa10.76□□□□□ -0.69
TNFRSF8-203ENST00000417814 RNF2Q99496 336 aa10.76□□□□□ -0.69
TNFRSF8-203ENST00000417814 PARD6GQ9BYG4 376 aaPredicted RBP10.76□□□□□ -0.69
TNFRSF8-203ENST00000417814 JPT1Q9UK76 154 aa10.76□□□□□ -0.69
TNFRSF8-203ENST00000417814 ZNF841Q6ZN19 808 aa10.76□□□□□ -0.69
TNFRSF8-203ENST00000417814 Q71RC1 249 aaPredicted RBP10.76□□□□□ -0.69
TNFRSF8-203ENST00000417814 TP53TG3Q9ULZ0 132 aa10.76□□□□□ -0.69
TNFRSF8-203ENST00000417814 HIGD1CA8MV81 97 aa10.75□□□□□ -0.69
TNFRSF8-203ENST00000417814 J3KRW8 73 aa10.75□□□□□ -0.69
TNFRSF8-203ENST00000417814 IGHV1-46P01743 117 aa10.75□□□□□ -0.69
TNFRSF8-203ENST00000417814 C17orf58Q2M2W7 97 aa10.75□□□□□ -0.69
TNFRSF8-203ENST00000417814 TMEM116Q8NCL8 245 aa10.75□□□□□ -0.69
TNFRSF8-203ENST00000417814 SLC25A33Q9BSK2 321 aa10.75□□□□□ -0.69
TNFRSF8-203ENST00000417814 DPRXA6NFQ7 191 aa10.75□□□□□ -0.69
TNFRSF8-203ENST00000417814 CGB1A6NKQ9 187 aa10.75□□□□□ -0.69
TNFRSF8-203ENST00000417814 C8orf88P0DMB2 117 aa10.75□□□□□ -0.69
TNFRSF8-203ENST00000417814 AREGP15514 252 aa10.75□□□□□ -0.69
TNFRSF8-203ENST00000417814 EXOC3-AS1Q8N2X6 119 aa10.75□□□□□ -0.69
TNFRSF8-203ENST00000417814 IGHV3-49A0A0A0MS15 119 aa10.74□□□□□ -0.69
TNFRSF8-203ENST00000417814 NPIPB11E5RHQ5 1161 aa10.74□□□□□ -0.69
TNFRSF8-203ENST00000417814 C3orf79P0CE67 100 aa10.74□□□□□ -0.69
TNFRSF8-203ENST00000417814 CDC42EP3Q9UKI2 254 aa10.74□□□□□ -0.69
TNFRSF8-203ENST00000417814 USP9XQ93008 2570 aaPredicted RBP10.74□□□□□ -0.69
TNFRSF8-203ENST00000417814 FAM90A27PA6NNH2 459 aa10.74□□□□□ -0.69
TNFRSF8-203ENST00000417814 CHEK1O14757 476 aa10.74□□□□□ -0.69
TNFRSF8-203ENST00000417814 LCN2P80188 198 aa10.74□□□□□ -0.69
TNFRSF8-203ENST00000417814 RUSC1-AS1Q66K80 236 aa10.74□□□□□ -0.69
TNFRSF8-203ENST00000417814 SMIM15Q7Z3B0 74 aa10.74□□□□□ -0.69
TNFRSF8-203ENST00000417814 Q8N7P7 452 aa10.74□□□□□ -0.69
TNFRSF8-203ENST00000417814 UQCRFS1P47985 274 aa10.74□□□□□ -0.69
TNFRSF8-203ENST00000417814 FBXL15Q9H469 300 aa10.74□□□□□ -0.69
TNFRSF8-203ENST00000417814 LINC00173Q6ZV60 143 aa10.73□□□□□ -0.69
TNFRSF8-203ENST00000417814 PDPNQ86YL7 162 aa10.73□□□□□ -0.69
TNFRSF8-203ENST00000417814 CCDC168Q8NDH2 2452 aa10.73□□□□□ -0.69
TNFRSF8-203ENST00000417814 C1orf159Q96HA4 380 aa10.73□□□□□ -0.69
TNFRSF8-203ENST00000417814 SPRY4Q9C004 299 aa10.73□□□□□ -0.69
TNFRSF8-203ENST00000417814 TNFRSF19Q9NS68 423 aa10.73□□□□□ -0.69
TNFRSF8-203ENST00000417814 hDV102S1A0JD36 115 aa10.73□□□□□ -0.69
TNFRSF8-203ENST00000417814 NDUFB3O43676 98 aa10.73□□□□□ -0.69
TNFRSF8-203ENST00000417814 YPEL1O60688 119 aa10.73□□□□□ -0.69
TNFRSF8-203ENST00000417814 TDGF1P13385 188 aa10.73□□□□□ -0.69
TNFRSF8-203ENST00000417814 PRR30Q53SZ7 412 aaPredicted RBP10.73□□□□□ -0.69
TNFRSF8-203ENST00000417814 CIARTQ8N365 385 aaPredicted RBP10.73□□□□□ -0.69
TNFRSF8-203ENST00000417814 LINC01560Q8TB33 94 aa10.73□□□□□ -0.69
TNFRSF8-203ENST00000417814 YPEL2Q96QA6 119 aa10.73□□□□□ -0.69
TNFRSF8-203ENST00000417814 PYGO2Q9BRQ0 406 aa10.73□□□□□ -0.69
TNFRSF8-203ENST00000417814 DKK4Q9UBT3 224 aa10.73□□□□□ -0.69
TNFRSF8-203ENST00000417814 SLC25A15Q9Y619 301 aa10.73□□□□□ -0.69
TNFRSF8-203ENST00000417814 DCHS2Q6V1P9 2916 aa10.73□□□□□ -0.69
TNFRSF8-203ENST00000417814 TRGV8A0A0C4DH27 118 aa10.72□□□□□ -0.69
TNFRSF8-203ENST00000417814 ITGB1BP1O14713 200 aa10.72□□□□□ -0.69
TNFRSF8-203ENST00000417814 TMEM177Q53S58 311 aa10.72□□□□□ -0.69
TNFRSF8-203ENST00000417814 GOLT1AQ6ZVE7 132 aa10.72□□□□□ -0.69
TNFRSF8-203ENST00000417814 FNDC4Q9H6D8 234 aaPredicted RBP10.72□□□□□ -0.69
TNFRSF8-203ENST00000417814 ZNF430Q9H8G1 570 aaPredicted RBP10.72□□□□□ -0.69
TNFRSF8-203ENST00000417814 TMEM167BQ9NRX6 74 aa10.72□□□□□ -0.69
TNFRSF8-203ENST00000417814 ONECUT1Q9UBC0 465 aa10.72□□□□□ -0.69
TNFRSF8-203ENST00000417814 PRNDQ9UKY0 176 aa10.72□□□□□ -0.69
TNFRSF8-203ENST00000417814 COL5A1P20908 1838 aaPredicted RBP10.72□□□□□ -0.69
TNFRSF8-203ENST00000417814 IGHV3-66A0A0C4DH42 116 aa10.72□□□□□ -0.69
TNFRSF8-203ENST00000417814 A0A1W2PS18 150 aa10.72□□□□□ -0.69
TNFRSF8-203ENST00000417814 NKX6-3A6NJ46 265 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms