RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 LRTM2Q8N967 370 aa11.41□□□□□ -0.58
NUP50-204ENST00000417702 OR1S1Q8NH92 325 aa11.41□□□□□ -0.58
NUP50-204ENST00000417702 TMEM231Q9H6L2 316 aa11.41□□□□□ -0.58
NUP50-204ENST00000417702 MRPL36Q9P0J6 103 aaKnown RBP11.41□□□□□ -0.58
NUP50-204ENST00000417702 NBEAL2Q6ZNJ1 2754 aa11.41□□□□□ -0.58
NUP50-204ENST00000417702 IGKV3-7A0A075B6H7 116 aa11.4□□□□□ -0.58
NUP50-204ENST00000417702 A0A1B0GU03 582 aa11.4□□□□□ -0.58
NUP50-204ENST00000417702 FAM240BA0A1B0GVZ2 78 aa11.4□□□□□ -0.58
NUP50-204ENST00000417702 A0A1W2PS18 150 aa11.4□□□□□ -0.58
NUP50-204ENST00000417702 IFNA10P01566 189 aa11.4□□□□□ -0.58
NUP50-204ENST00000417702 TCRBP04435 133 aa11.4□□□□□ -0.58
NUP50-204ENST00000417702 OR4E1P0C645 316 aa11.4□□□□□ -0.58
NUP50-204ENST00000417702 NPPCP23582 126 aa11.4□□□□□ -0.58
NUP50-204ENST00000417702 TFPI2P48307 235 aa11.4□□□□□ -0.58
NUP50-204ENST00000417702 APOC4P55056 127 aa11.4□□□□□ -0.58
NUP50-204ENST00000417702 ODF3L2Q3SX64 289 aa11.4□□□□□ -0.58
NUP50-204ENST00000417702 C4orf46Q504U0 113 aa11.4□□□□□ -0.58
NUP50-204ENST00000417702 TCF24Q7RTU0 167 aa11.4□□□□□ -0.58
NUP50-204ENST00000417702 METTL26Q96S19 204 aa11.4□□□□□ -0.58
NUP50-204ENST00000417702 C20orf85Q9H1P6 137 aa11.4□□□□□ -0.58
NUP50-204ENST00000417702 ZFAND3Q9H8U3 227 aa11.4□□□□□ -0.58
NUP50-204ENST00000417702 HSPB7Q9UBY9 170 aa11.4□□□□□ -0.58
NUP50-204ENST00000417702 TBC1D24Q9ULP9 559 aa11.4□□□□□ -0.58
NUP50-204ENST00000417702 U3KQ87 197 aa11.4□□□□□ -0.58
NUP50-204ENST00000417702 C9orf170A2RU37 121 aa11.39□□□□□ -0.59
NUP50-204ENST00000417702 ANXA7P20073 488 aaKnown RBP11.39□□□□□ -0.59
NUP50-204ENST00000417702 RND2P52198 227 aa11.39□□□□□ -0.59
NUP50-204ENST00000417702 TIGITQ495A1 244 aa11.39□□□□□ -0.59
NUP50-204ENST00000417702 FAM90A2PQ658T7 463 aa11.39□□□□□ -0.59
NUP50-204ENST00000417702 PRSS54Q6PEW0 395 aa11.39□□□□□ -0.59
NUP50-204ENST00000417702 GBGT1Q8N5D6 347 aa11.39□□□□□ -0.59
NUP50-204ENST00000417702 OR1S2Q8NGQ3 325 aa11.39□□□□□ -0.59
NUP50-204ENST00000417702 COQ8AQ8NI60 647 aa11.39□□□□□ -0.59
NUP50-204ENST00000417702 DTD1Q8TEA8 209 aa11.39□□□□□ -0.59
NUP50-204ENST00000417702 ST8SIA2Q92186 375 aa11.39□□□□□ -0.59
NUP50-204ENST00000417702 NARS2Q96I59 477 aaKnown RBP11.39□□□□□ -0.59
NUP50-204ENST00000417702 RBKSQ9H477 322 aa11.39□□□□□ -0.59
NUP50-204ENST00000417702 VSIRQ9H7M9 311 aa11.39□□□□□ -0.59
NUP50-204ENST00000417702 TMED3Q9Y3Q3 217 aa11.39□□□□□ -0.59
NUP50-204ENST00000417702 IGHV3-66A0A0C4DH42 116 aa11.38□□□□□ -0.59
NUP50-204ENST00000417702 DNASE2O00115 360 aaPredicted RBP11.38□□□□□ -0.59
NUP50-204ENST00000417702 IGKV1-17P01599 117 aa11.38□□□□□ -0.59
NUP50-204ENST00000417702 OR10J1P30954 320 aa11.38□□□□□ -0.59
NUP50-204ENST00000417702 ATP5IP56385 69 aaPredicted RBP11.38□□□□□ -0.59
NUP50-204ENST00000417702 RPL11P62913 178 aaKnown RBP11.38□□□□□ -0.59
NUP50-204ENST00000417702 DHRS2Q13268 280 aa11.38□□□□□ -0.59
NUP50-204ENST00000417702 ZFAND6Q6FIF0 208 aa11.38□□□□□ -0.59
NUP50-204ENST00000417702 LYG2Q86SG7 212 aa11.38□□□□□ -0.59
NUP50-204ENST00000417702 IL17DQ8TAD2 202 aa11.38□□□□□ -0.59
NUP50-204ENST00000417702 TRAV6A0A075B6T7 132 aa11.37□□□□□ -0.59
NUP50-204ENST00000417702 UBE2CO00762 179 aa11.37□□□□□ -0.59
NUP50-204ENST00000417702 DFFBO76075 338 aa11.37□□□□□ -0.59
NUP50-204ENST00000417702 APOHP02749 345 aaPredicted RBP11.37□□□□□ -0.59
NUP50-204ENST00000417702 IFNA4P05014 189 aa11.37□□□□□ -0.59
NUP50-204ENST00000417702 IGLC1P0CG04 106 aa11.37□□□□□ -0.59
NUP50-204ENST00000417702 SLC25A6P12236 298 aa11.37□□□□□ -0.59
NUP50-204ENST00000417702 DEFA1P59665 94 aa11.37□□□□□ -0.59
NUP50-204ENST00000417702 DEFA3P59666 94 aa11.37□□□□□ -0.59
NUP50-204ENST00000417702 YPEL3P61236 119 aaPredicted RBP11.37□□□□□ -0.59
NUP50-204ENST00000417702 WFDC3Q8IUB2 231 aa11.37□□□□□ -0.59
NUP50-204ENST00000417702 ENKURQ8TC29 256 aa11.37□□□□□ -0.59
NUP50-204ENST00000417702 Q8WTZ3 238 aa11.37□□□□□ -0.59
NUP50-204ENST00000417702 TMEM170AQ8WVE7 144 aa11.37□□□□□ -0.59
NUP50-204ENST00000417702 NUDT15Q9NV35 164 aa11.37□□□□□ -0.59
NUP50-204ENST00000417702 KIR2DL5BA0A0G2JN68 375 aa11.36□□□□□ -0.59
NUP50-204ENST00000417702 KIR2DL5BA0A0G2JPC4 375 aa11.36□□□□□ -0.59
NUP50-204ENST00000417702 HOXB5P09067 269 aa11.36□□□□□ -0.59
NUP50-204ENST00000417702 H2AFB2P0C5Z0 115 aa11.36□□□□□ -0.59
NUP50-204ENST00000417702 CRYBB3P26998 211 aa11.36□□□□□ -0.59
NUP50-204ENST00000417702 IFITM3Q01628 133 aa11.36□□□□□ -0.59
NUP50-204ENST00000417702 Q6ZWC4 215 aa11.36□□□□□ -0.59
NUP50-204ENST00000417702 APRG1Q8IVJ8 170 aa11.36□□□□□ -0.59
NUP50-204ENST00000417702 KIR2DL5AQ8N109 375 aa11.36□□□□□ -0.59
NUP50-204ENST00000417702 LILRB2Q8N423 598 aa11.36□□□□□ -0.59
NUP50-204ENST00000417702 STPG3Q8N7X2 389 aa11.36□□□□□ -0.59
NUP50-204ENST00000417702 KIR2DL5BQ8NHK3 375 aa11.36□□□□□ -0.59
NUP50-204ENST00000417702 NPIPB3Q92617 1050 aa11.36□□□□□ -0.59
NUP50-204ENST00000417702 ACY3Q96HD9 319 aa11.36□□□□□ -0.59
NUP50-204ENST00000417702 GRAMD2BQ96HH9 432 aa11.36□□□□□ -0.59
NUP50-204ENST00000417702 OVOL2Q9BRP0 275 aa11.36□□□□□ -0.59
NUP50-204ENST00000417702 KMT2CQ8NEZ4 4911 aaKnown RBP11.35□□□□□ -0.59
NUP50-204ENST00000417702 TRAV2A0A0B4J234 112 aa11.35□□□□□ -0.59
NUP50-204ENST00000417702 PITX3O75364 302 aa11.35□□□□□ -0.59
NUP50-204ENST00000417702 MED6O75586 246 aa11.35□□□□□ -0.59
NUP50-204ENST00000417702 IFNA21P01568 189 aa11.35□□□□□ -0.59
NUP50-204ENST00000417702 RPL35AP18077 110 aaKnown RBP11.35□□□□□ -0.59
NUP50-204ENST00000417702 GGNBP1Q5YKI7 109 aa11.35□□□□□ -0.59
NUP50-204ENST00000417702 MS4A6AQ9H2W1 248 aa11.35□□□□□ -0.59
NUP50-204ENST00000417702 RABAC1Q9UI14 185 aa11.35□□□□□ -0.59
NUP50-204ENST00000417702 FAM90A26D6RGX4 464 aa11.34□□□□□ -0.59
NUP50-204ENST00000417702 RD3LP0DJH9 198 aa11.34□□□□□ -0.59
NUP50-204ENST00000417702 P2RY1P47900 373 aa11.34□□□□□ -0.59
NUP50-204ENST00000417702 EIF2B2P49770 351 aaKnown RBP11.34□□□□□ -0.59
NUP50-204ENST00000417702 MITD1Q8WV92 249 aa11.34□□□□□ -0.59
NUP50-204ENST00000417702 CIB3Q96Q77 187 aaPredicted RBP11.34□□□□□ -0.59
NUP50-204ENST00000417702 MAP6D1Q9H9H5 199 aa11.34□□□□□ -0.59
NUP50-204ENST00000417702 TP53TG1Q9Y2A0 90 aa11.34□□□□□ -0.59
NUP50-204ENST00000417702 SPRY2O43597 315 aa11.33□□□□□ -0.6
NUP50-204ENST00000417702 IL4P05112 153 aa11.33□□□□□ -0.6
NUP50-204ENST00000417702 HNRNPCP07910 306 aaKnown RBP eCLIP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms