RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 UBR4Q5T4S7 5183 aa6.72□□□□□ -1.33
LINC01238-201ENST00000416204 FAT1Q14517 4588 aa6.71□□□□□ -1.33
LINC01238-201ENST00000416204 TRAV14DV4A0A0A6YYC5 116 aa6.71□□□□□ -1.34
LINC01238-201ENST00000416204 DISC1C4P0D8 188 aa6.71□□□□□ -1.34
LINC01238-201ENST00000416204 SSNA1O43805 119 aa6.71□□□□□ -1.34
LINC01238-201ENST00000416204 CDK2AP2O75956 126 aa6.71□□□□□ -1.34
LINC01238-201ENST00000416204 RAB3DO95716 219 aa6.71□□□□□ -1.34
LINC01238-201ENST00000416204 IFNA21P01568 189 aa6.71□□□□□ -1.34
LINC01238-201ENST00000416204 IFNA17P01571 189 aa6.71□□□□□ -1.34
LINC01238-201ENST00000416204 ZNF688P0C7X2 276 aa6.71□□□□□ -1.34
LINC01238-201ENST00000416204 HTN3P15516 51 aa6.71□□□□□ -1.34
LINC01238-201ENST00000416204 NKX2-5P52952 324 aaPredicted RBP6.71□□□□□ -1.34
LINC01238-201ENST00000416204 PAFAH1B2P68402 229 aa6.71□□□□□ -1.34
LINC01238-201ENST00000416204 CDNFQ49AH0 187 aa6.71□□□□□ -1.34
LINC01238-201ENST00000416204 SOHLH1Q5JUK2 328 aa6.71□□□□□ -1.34
LINC01238-201ENST00000416204 ACTL10Q5JWF8 245 aa6.71□□□□□ -1.34
LINC01238-201ENST00000416204 ZNF66Q6ZN08 573 aa6.71□□□□□ -1.34
LINC01238-201ENST00000416204 TRPT1Q86TN4 253 aaKnown RBP6.71□□□□□ -1.34
LINC01238-201ENST00000416204 Q8N1X5 172 aa6.71□□□□□ -1.34
LINC01238-201ENST00000416204 OR51H1Q8NH63 302 aa6.71□□□□□ -1.34
LINC01238-201ENST00000416204 MISP3Q96FF7 219 aa6.71□□□□□ -1.34
LINC01238-201ENST00000416204 F11RQ9Y624 299 aaKnown RBP6.71□□□□□ -1.34
LINC01238-201ENST00000416204 MYCBP2O75592 4640 aa6.7□□□□□ -1.34
LINC01238-201ENST00000416204 AGRNO00468 2067 aa6.7□□□□□ -1.34
LINC01238-201ENST00000416204 TMEM235A6NFC5 223 aa6.7□□□□□ -1.34
LINC01238-201ENST00000416204 ZNF705EA8MWA4 302 aaPredicted RBP6.7□□□□□ -1.34
LINC01238-201ENST00000416204 CYB5BO43169 146 aa6.7□□□□□ -1.34
LINC01238-201ENST00000416204 SLC22A5O76082 557 aa6.7□□□□□ -1.34
LINC01238-201ENST00000416204 DTYMKP23919 212 aa6.7□□□□□ -1.34
LINC01238-201ENST00000416204 FXYD4P59646 89 aa6.7□□□□□ -1.34
LINC01238-201ENST00000416204 IFITM2Q01629 132 aa6.7□□□□□ -1.34
LINC01238-201ENST00000416204 Q6ZS49 121 aa6.7□□□□□ -1.34
LINC01238-201ENST00000416204 STXBP6Q8NFX7 210 aa6.7□□□□□ -1.34
LINC01238-201ENST00000416204 OR11H7Q8NGC8 314 aa6.7□□□□□ -1.34
LINC01238-201ENST00000416204 PRRT1Q99946 306 aa6.7□□□□□ -1.34
LINC01238-201ENST00000416204 IFT46Q9NQC8 304 aa6.7□□□□□ -1.34
LINC01238-201ENST00000416204 ANAPC10Q9UM13 185 aa6.7□□□□□ -1.34
LINC01238-201ENST00000416204 SSX5O60225 188 aa6.69□□□□□ -1.34
LINC01238-201ENST00000416204 ATP6V1G1O75348 118 aa6.69□□□□□ -1.34
LINC01238-201ENST00000416204 CD3DP04234 171 aa6.69□□□□□ -1.34
LINC01238-201ENST00000416204 GIPP09681 153 aaPredicted RBP6.69□□□□□ -1.34
LINC01238-201ENST00000416204 NQO2P16083 231 aa6.69□□□□□ -1.34
LINC01238-201ENST00000416204 NAT1P18440 290 aa6.69□□□□□ -1.34
LINC01238-201ENST00000416204 FCGR2CP31995 323 aa6.69□□□□□ -1.34
LINC01238-201ENST00000416204 TAS2R31P59538 309 aa6.69□□□□□ -1.34
LINC01238-201ENST00000416204 GNG2P59768 71 aa6.69□□□□□ -1.34
LINC01238-201ENST00000416204 RAP2BP61225 183 aa6.69□□□□□ -1.34
LINC01238-201ENST00000416204 RELQ04864 619 aaPredicted RBP6.69□□□□□ -1.34
LINC01238-201ENST00000416204 RNASE10Q5GAN6 216 aaKnown RBP6.69□□□□□ -1.34
LINC01238-201ENST00000416204 TOMM20LQ6UXN7 152 aa6.69□□□□□ -1.34
LINC01238-201ENST00000416204 OR51S1Q8NGJ8 323 aa6.69□□□□□ -1.34
LINC01238-201ENST00000416204 OR1L8Q8NGR8 309 aa6.69□□□□□ -1.34
LINC01238-201ENST00000416204 PINX1Q96BK5 328 aaKnown RBP6.69□□□□□ -1.34
LINC01238-201ENST00000416204 OR10C1Q96KK4 312 aa6.69□□□□□ -1.34
LINC01238-201ENST00000416204 SLC5A7Q9GZV3 580 aa6.69□□□□□ -1.34
LINC01238-201ENST00000416204 TMEM14BQ9NUH8 114 aa6.69□□□□□ -1.34
LINC01238-201ENST00000416204 XCL2Q9UBD3 114 aa6.69□□□□□ -1.34
LINC01238-201ENST00000416204 FLVCR2Q9UPI3 526 aa6.69□□□□□ -1.34
LINC01238-201ENST00000416204 OR51B2Q9Y5P1 312 aa6.69□□□□□ -1.34
LINC01238-201ENST00000416204 DBX1A6NMT0 343 aa6.68□□□□□ -1.34
LINC01238-201ENST00000416204 HPRT1P00492 218 aa6.68□□□□□ -1.34
LINC01238-201ENST00000416204 RLN1P04808 185 aa6.68□□□□□ -1.34
LINC01238-201ENST00000416204 CTXN2P0C2S0 81 aa6.68□□□□□ -1.34
LINC01238-201ENST00000416204 AADACL3Q5VUY0 350 aa6.68□□□□□ -1.34
LINC01238-201ENST00000416204 TMEM17Q86X19 198 aa6.68□□□□□ -1.34
LINC01238-201ENST00000416204 CSNK1G2-AS1Q8NCQ2 148 aa6.68□□□□□ -1.34
LINC01238-201ENST00000416204 ZNF431Q8TF32 576 aaPredicted RBP6.68□□□□□ -1.34
LINC01238-201ENST00000416204 LSM10Q969L4 123 aaKnown RBP6.68□□□□□ -1.34
LINC01238-201ENST00000416204 SCGB3A2Q96PL1 93 aa6.68□□□□□ -1.34
LINC01238-201ENST00000416204 SRSF8Q9BRL6 282 aaKnown RBP6.68□□□□□ -1.34
LINC01238-201ENST00000416204 NDUFA4L2Q9NRX3 87 aa6.68□□□□□ -1.34
LINC01238-201ENST00000416204 ANXA10Q9UJ72 324 aa6.68□□□□□ -1.34
LINC01238-201ENST00000416204 DMBT1Q9UGM3 2413 aaPredicted RBP6.67□□□□□ -1.34
LINC01238-201ENST00000416204 IGHV3OR16-12A0A075B7B8 117 aa6.67□□□□□ -1.34
LINC01238-201ENST00000416204 MEIS3P1A6NDR6 274 aa6.67□□□□□ -1.34
LINC01238-201ENST00000416204 I3L2K1 104 aa6.67□□□□□ -1.34
LINC01238-201ENST00000416204 GNG7O60262 68 aa6.67□□□□□ -1.34
LINC01238-201ENST00000416204 MT-CO2P00403 227 aa6.67□□□□□ -1.34
LINC01238-201ENST00000416204 KRASP01116 189 aa6.67□□□□□ -1.34
LINC01238-201ENST00000416204 SPP1P10451 314 aa6.67□□□□□ -1.34
LINC01238-201ENST00000416204 CXCL3P19876 107 aa6.67□□□□□ -1.34
LINC01238-201ENST00000416204 ANXA7P20073 488 aaKnown RBP6.67□□□□□ -1.34
LINC01238-201ENST00000416204 S100A1P23297 94 aa6.67□□□□□ -1.34
LINC01238-201ENST00000416204 NPY1RP25929 384 aa6.67□□□□□ -1.34
LINC01238-201ENST00000416204 G6PCP35575 357 aa6.67□□□□□ -1.34
LINC01238-201ENST00000416204 MFAP4P55083 255 aa6.67□□□□□ -1.34
LINC01238-201ENST00000416204 FXYD7P58549 80 aa6.67□□□□□ -1.34
LINC01238-201ENST00000416204 ARPC4P59998 168 aa6.67□□□□□ -1.34
LINC01238-201ENST00000416204 UBE2MP61081 183 aaKnown RBP6.67□□□□□ -1.34
LINC01238-201ENST00000416204 DHODHQ02127 395 aa6.67□□□□□ -1.34
LINC01238-201ENST00000416204 FAAP20Q6NZ36 180 aa6.67□□□□□ -1.34
LINC01238-201ENST00000416204 LPCAT3Q6P1A2 487 aa6.67□□□□□ -1.34
LINC01238-201ENST00000416204 MORN3Q6PF18 240 aaPredicted RBP6.67□□□□□ -1.34
LINC01238-201ENST00000416204 ZNF818PQ6ZRF7 136 aa6.67□□□□□ -1.34
LINC01238-201ENST00000416204 ARRDC1Q8N5I2 433 aa6.67□□□□□ -1.34
LINC01238-201ENST00000416204 BEST4Q8NFU0 473 aa6.67□□□□□ -1.34
LINC01238-201ENST00000416204 OR4D10Q8NGI6 311 aa6.67□□□□□ -1.34
LINC01238-201ENST00000416204 SEC22CQ9BRL7 303 aa6.67□□□□□ -1.34
LINC01238-201ENST00000416204 VSIRQ9H7M9 311 aa6.67□□□□□ -1.34
LINC01238-201ENST00000416204 MGAT4CQ9UBM8 478 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms