RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 STXBP6Q8NFX7 210 aa11.38□□□□□ -0.59
SBDSP1-201ENST00000415772 OR52E5Q8NH55 327 aa11.38□□□□□ -0.59
SBDSP1-201ENST00000415772 RNASE11Q8TAA1 199 aaKnown RBP11.38□□□□□ -0.59
SBDSP1-201ENST00000415772 PUS1Q9Y606 427 aaKnown RBP eCLIP11.38□□□□□ -0.59
SBDSP1-201ENST00000415772 TMEM56-RWDD3S4R434 201 aa11.38□□□□□ -0.59
SBDSP1-201ENST00000415772 FRAS1Q86XX4 4008 aa11.38□□□□□ -0.59
SBDSP1-201ENST00000415772 TRAV2A0A0B4J234 112 aa11.37□□□□□ -0.59
SBDSP1-201ENST00000415772 TRAV10A0A0B4J240 114 aa11.37□□□□□ -0.59
SBDSP1-201ENST00000415772 A0A0B4J293 547 aa11.37□□□□□ -0.59
SBDSP1-201ENST00000415772 ANXA3P12429 323 aa11.37□□□□□ -0.59
SBDSP1-201ENST00000415772 NPPCP23582 126 aa11.37□□□□□ -0.59
SBDSP1-201ENST00000415772 EIF2B2P49770 351 aaKnown RBP11.37□□□□□ -0.59
SBDSP1-201ENST00000415772 SUB1P53999 127 aaKnown RBP eCLIP11.37□□□□□ -0.59
SBDSP1-201ENST00000415772 SRPXP78539 464 aa11.37□□□□□ -0.59
SBDSP1-201ENST00000415772 PRR20EP86478 221 aa11.37□□□□□ -0.59
SBDSP1-201ENST00000415772 PRR20CP86479 221 aa11.37□□□□□ -0.59
SBDSP1-201ENST00000415772 PRR20DP86480 221 aa11.37□□□□□ -0.59
SBDSP1-201ENST00000415772 PRR20BP86481 221 aa11.37□□□□□ -0.59
SBDSP1-201ENST00000415772 PRR20AP86496 221 aa11.37□□□□□ -0.59
SBDSP1-201ENST00000415772 MORN3Q6PF18 240 aaPredicted RBP11.37□□□□□ -0.59
SBDSP1-201ENST00000415772 SRRQ9GZT4 340 aa11.37□□□□□ -0.59
SBDSP1-201ENST00000415772 HRH4Q9H3N8 390 aa11.37□□□□□ -0.59
SBDSP1-201ENST00000415772 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.37□□□□□ -0.59
SBDSP1-201ENST00000415772 NAP1L6A6NFF2 107 aa11.36□□□□□ -0.59
SBDSP1-201ENST00000415772 CORTO00230 105 aa11.36□□□□□ -0.59
SBDSP1-201ENST00000415772 IFNA17P01571 189 aa11.36□□□□□ -0.59
SBDSP1-201ENST00000415772 SPP1P10451 314 aa11.36□□□□□ -0.59
SBDSP1-201ENST00000415772 MIFP14174 115 aa11.36□□□□□ -0.59
SBDSP1-201ENST00000415772 LINC00299Q6ZSB3 139 aa11.36□□□□□ -0.59
SBDSP1-201ENST00000415772 SELENOHQ8IZQ5 122 aaKnown RBP11.36□□□□□ -0.59
SBDSP1-201ENST00000415772 TMEM230Q96A57 120 aa11.36□□□□□ -0.59
SBDSP1-201ENST00000415772 GRAMD2BQ96HH9 432 aa11.36□□□□□ -0.59
SBDSP1-201ENST00000415772 METTL26Q96S19 204 aa11.36□□□□□ -0.59
SBDSP1-201ENST00000415772 VSIRQ9H7M9 311 aa11.36□□□□□ -0.59
SBDSP1-201ENST00000415772 ENY2Q9NPA8 101 aa11.36□□□□□ -0.59
SBDSP1-201ENST00000415772 APLNQ9ULZ1 77 aa11.36□□□□□ -0.59
SBDSP1-201ENST00000415772 IGHV4-28A0A0C4DH34 117 aa11.35□□□□□ -0.59
SBDSP1-201ENST00000415772 APOHP02749 345 aaPredicted RBP11.35□□□□□ -0.59
SBDSP1-201ENST00000415772 HLA-DMBP28068 263 aa11.35□□□□□ -0.59
SBDSP1-201ENST00000415772 INPP1P49441 399 aa11.35□□□□□ -0.59
SBDSP1-201ENST00000415772 SPCS3P61009 180 aa11.35□□□□□ -0.59
SBDSP1-201ENST00000415772 TMEM128Q5BJH2 165 aa11.35□□□□□ -0.59
SBDSP1-201ENST00000415772 SPINK9Q5DT21 86 aa11.35□□□□□ -0.59
SBDSP1-201ENST00000415772 LINC00336Q6ZUF6 198 aa11.35□□□□□ -0.59
SBDSP1-201ENST00000415772 ZNF414Q96IQ9 312 aa11.35□□□□□ -0.59
SBDSP1-201ENST00000415772 IGHV4-4A0A075B6R2 117 aa11.34□□□□□ -0.59
SBDSP1-201ENST00000415772 A0A0B4J2A0 478 aa11.34□□□□□ -0.59
SBDSP1-201ENST00000415772 DUXBA0A1W2PPF3 345 aa11.34□□□□□ -0.59
SBDSP1-201ENST00000415772 AKR1C4P17516 323 aa11.34□□□□□ -0.59
SBDSP1-201ENST00000415772 HOXA1P49639 335 aaPredicted RBP11.34□□□□□ -0.59
SBDSP1-201ENST00000415772 IZUMO4Q1ZYL8 232 aa11.34□□□□□ -0.59
SBDSP1-201ENST00000415772 TMEM268Q5VZI3 342 aa11.34□□□□□ -0.59
SBDSP1-201ENST00000415772 TRIQKQ629K1 86 aa11.34□□□□□ -0.59
SBDSP1-201ENST00000415772 PVRIGQ6DKI7 326 aa11.34□□□□□ -0.59
SBDSP1-201ENST00000415772 LGI3Q8N145 548 aa11.34□□□□□ -0.59
SBDSP1-201ENST00000415772 Q8NAQ8 132 aa11.34□□□□□ -0.59
SBDSP1-201ENST00000415772 SHPKQ9UHJ6 478 aa11.34□□□□□ -0.59
SBDSP1-201ENST00000415772 ZNF688P0C7X2 276 aa11.33□□□□□ -0.6
SBDSP1-201ENST00000415772 OPRK1P41145 380 aa11.33□□□□□ -0.6
SBDSP1-201ENST00000415772 Q6ZTC4 211 aa11.33□□□□□ -0.6
SBDSP1-201ENST00000415772 FAM24BQ8N5W8 94 aa11.33□□□□□ -0.6
SBDSP1-201ENST00000415772 LHFPL5Q8TAF8 219 aa11.33□□□□□ -0.6
SBDSP1-201ENST00000415772 C7orf50Q9BRJ6 194 aaKnown RBP11.33□□□□□ -0.6
SBDSP1-201ENST00000415772 KMT2AQ03164 3969 aa11.33□□□□□ -0.6
SBDSP1-201ENST00000415772 A0A0G2JRQ6 117 aa11.32□□□□□ -0.6
SBDSP1-201ENST00000415772 CENPXA8MT69 81 aa11.32□□□□□ -0.6
SBDSP1-201ENST00000415772 TMEM50AO95807 157 aa11.32□□□□□ -0.6
SBDSP1-201ENST00000415772 P2RY1P47900 373 aa11.32□□□□□ -0.6
SBDSP1-201ENST00000415772 CCR6P51684 374 aa11.32□□□□□ -0.6
SBDSP1-201ENST00000415772 UBE2MP61081 183 aaKnown RBP11.32□□□□□ -0.6
SBDSP1-201ENST00000415772 NUTF2P61970 127 aaKnown RBP11.32□□□□□ -0.6
SBDSP1-201ENST00000415772 SUPT4H1P63272 117 aaKnown RBP11.32□□□□□ -0.6
SBDSP1-201ENST00000415772 CNPY1Q3B7I2 92 aa11.32□□□□□ -0.6
SBDSP1-201ENST00000415772 ACTL10Q5JWF8 245 aa11.32□□□□□ -0.6
SBDSP1-201ENST00000415772 Q6ZRM9 215 aa11.32□□□□□ -0.6
SBDSP1-201ENST00000415772 TRPT1Q86TN4 253 aaKnown RBP11.32□□□□□ -0.6
SBDSP1-201ENST00000415772 NOXA1Q86UR1 476 aa11.32□□□□□ -0.6
SBDSP1-201ENST00000415772 GPR146Q96CH1 333 aa11.32□□□□□ -0.6
SBDSP1-201ENST00000415772 ZFAND3Q9H8U3 227 aa11.32□□□□□ -0.6
SBDSP1-201ENST00000415772 TBC1D24Q9ULP9 559 aa11.32□□□□□ -0.6
SBDSP1-201ENST00000415772 KNCNA6PVL3 124 aa11.31□□□□□ -0.6
SBDSP1-201ENST00000415772 RBMY1A1P0DJD3 496 aaKnown RBP11.31□□□□□ -0.6
SBDSP1-201ENST00000415772 RBMY1CP0DJD4 496 aa11.31□□□□□ -0.6
SBDSP1-201ENST00000415772 SULT1A3P0DMM9 295 aa11.31□□□□□ -0.6
SBDSP1-201ENST00000415772 SULT1A4P0DMN0 295 aa11.31□□□□□ -0.6
SBDSP1-201ENST00000415772 NPY1RP25929 384 aa11.31□□□□□ -0.6
SBDSP1-201ENST00000415772 HTR2BP41595 481 aa11.31□□□□□ -0.6
SBDSP1-201ENST00000415772 DHRS2Q13268 280 aa11.31□□□□□ -0.6
SBDSP1-201ENST00000415772 RBMY1FQ15415 496 aaKnown RBP11.31□□□□□ -0.6
SBDSP1-201ENST00000415772 BAK1Q16611 211 aa11.31□□□□□ -0.6
SBDSP1-201ENST00000415772 LILRB2Q8N423 598 aa11.31□□□□□ -0.6
SBDSP1-201ENST00000415772 LRTM2Q8N967 370 aa11.31□□□□□ -0.6
SBDSP1-201ENST00000415772 RNF126Q9BV68 326 aa11.31□□□□□ -0.6
SBDSP1-201ENST00000415772 CACNG5Q9UF02 275 aa11.31□□□□□ -0.6
SBDSP1-201ENST00000415772 A0A1B0GU03 582 aa11.3□□□□□ -0.6
SBDSP1-201ENST00000415772 HELTA6NFD8 242 aa11.3□□□□□ -0.6
SBDSP1-201ENST00000415772 K7EQG2 157 aa11.3□□□□□ -0.6
SBDSP1-201ENST00000415772 P0DMU3 169 aa11.3□□□□□ -0.6
SBDSP1-201ENST00000415772 FAM231AP0DMU4 169 aa11.3□□□□□ -0.6
SBDSP1-201ENST00000415772 FAM231CP0DMU5 169 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 160 ms