RNA–Protein interactions for RNA: ENST00000415361.6

CTNND1-206, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-206ENST00000415361 TRAV40A0A0B4J280 105 aa7.02□□□□□ -1.29
CTNND1-206ENST00000415361 NSUN5P1Q3KNT7 163 aa7.02□□□□□ -1.29
CTNND1-206ENST00000415361 RNF166Q96A37 237 aaPredicted RBP7.02□□□□□ -1.29
CTNND1-206ENST00000415361 RNF114Q9Y508 228 aa7.02□□□□□ -1.29
CTNND1-206ENST00000415361 F11RQ9Y624 299 aaKnown RBP7.02□□□□□ -1.29
CTNND1-206ENST00000415361 TRBV7-1A0A0A6YYK4 115 aa7.02□□□□□ -1.29
CTNND1-206ENST00000415361 TRBV7-9A0A0J9YWB2 115 aa7.02□□□□□ -1.29
CTNND1-206ENST00000415361 TIMM23O14925 209 aa7.02□□□□□ -1.29
CTNND1-206ENST00000415361 EMP1P54849 157 aa7.02□□□□□ -1.29
CTNND1-206ENST00000415361 NXT2Q9NPJ8 142 aaKnown RBP7.02□□□□□ -1.29
CTNND1-206ENST00000415361 SCO2A0A1W2PP80 73 aa7.02□□□□□ -1.29
CTNND1-206ENST00000415361 LINC00587B1AMM8 73 aa7.02□□□□□ -1.29
CTNND1-206ENST00000415361 TMEM50AO95807 157 aa7.02□□□□□ -1.29
CTNND1-206ENST00000415361 CCL20P78556 96 aa7.02□□□□□ -1.29
CTNND1-206ENST00000415361 VMO1Q7Z5L0 202 aa7.02□□□□□ -1.29
CTNND1-206ENST00000415361 FAM169BQ8N8A8 192 aa7.02□□□□□ -1.29
CTNND1-206ENST00000415361 USMG5Q96IX5 58 aa7.02□□□□□ -1.29
CTNND1-206ENST00000415361 FOXC2Q99958 501 aa7.02□□□□□ -1.29
CTNND1-206ENST00000415361 PEF1Q9UBV8 284 aaKnown RBP7.02□□□□□ -1.29
CTNND1-206ENST00000415361 S4R3C0 116 aa7.02□□□□□ -1.29
CTNND1-206ENST00000415361 FANCMQ8IYD8 2048 aa7.01□□□□□ -1.29
CTNND1-206ENST00000415361 DPRXA6NFQ7 191 aa7.01□□□□□ -1.29
CTNND1-206ENST00000415361 TCF21O43680 179 aa7.01□□□□□ -1.29
CTNND1-206ENST00000415361 NAT1P18440 290 aa7.01□□□□□ -1.29
CTNND1-206ENST00000415361 GATA3P23771 443 aa7.01□□□□□ -1.29
CTNND1-206ENST00000415361 SSC4DQ8WTU2 575 aa7.01□□□□□ -1.29
CTNND1-206ENST00000415361 C1QTNF4Q9BXJ3 329 aa7.01□□□□□ -1.29
CTNND1-206ENST00000415361 EPDR1Q9UM22 224 aa7.01□□□□□ -1.29
CTNND1-206ENST00000415361 PCNX1Q96RV3 2341 aa7.01□□□□□ -1.29
CTNND1-206ENST00000415361 A0A0G2JNJ9 132 aa7.01□□□□□ -1.29
CTNND1-206ENST00000415361 ERVH48-1M5A8F1 160 aa7.01□□□□□ -1.29
CTNND1-206ENST00000415361 TPTE2P1Q5T6R2 138 aa7.01□□□□□ -1.29
CTNND1-206ENST00000415361 FAM71F2Q6NXP2 309 aa7.01□□□□□ -1.29
CTNND1-206ENST00000415361 FAM89BQ8N5H3 189 aa7.01□□□□□ -1.29
CTNND1-206ENST00000415361 DMRTA2Q96SC8 542 aa7.01□□□□□ -1.29
CTNND1-206ENST00000415361 MRPL16Q9NX20 251 aaKnown RBP7.01□□□□□ -1.29
CTNND1-206ENST00000415361 PGPEP1Q9NXJ5 209 aa7.01□□□□□ -1.29
CTNND1-206ENST00000415361 Q9UFV3 132 aa7.01□□□□□ -1.29
CTNND1-206ENST00000415361 IGHV2-26A0A0B4J1V2 119 aa7.01□□□□□ -1.29
CTNND1-206ENST00000415361 FAM223BA6NKX1 122 aa7.01□□□□□ -1.29
CTNND1-206ENST00000415361 ZNF815PA8K554 130 aa7.01□□□□□ -1.29
CTNND1-206ENST00000415361 LYNX1G3V0Z9 82 aa7.01□□□□□ -1.29
CTNND1-206ENST00000415361 EFNA2O43921 213 aa7.01□□□□□ -1.29
CTNND1-206ENST00000415361 LYNX1P0DP58 116 aa7.01□□□□□ -1.29
CTNND1-206ENST00000415361 FOXG1P55316 489 aaPredicted RBP7.01□□□□□ -1.29
CTNND1-206ENST00000415361 ERVK11-1P61568 191 aa7.01□□□□□ -1.29
CTNND1-206ENST00000415361 GGNQ86UU5 652 aa7.01□□□□□ -1.29
CTNND1-206ENST00000415361 FAM223AQ8IWN6 122 aa7.01□□□□□ -1.29
CTNND1-206ENST00000415361 LINC01356Q8N9X3 169 aa7.01□□□□□ -1.29
CTNND1-206ENST00000415361 WFIKKN1Q96NZ8 548 aa7.01□□□□□ -1.29
CTNND1-206ENST00000415361 CARHSP1Q9Y2V2 147 aaKnown RBP7.01□□□□□ -1.29
CTNND1-206ENST00000415361 SRRM5B3KS81 715 aa7.01□□□□□ -1.29
CTNND1-206ENST00000415361 KIAA1644Q3SXP7 199 aa7.01□□□□□ -1.29
CTNND1-206ENST00000415361 TOMM7Q9P0U1 55 aa7.01□□□□□ -1.29
CTNND1-206ENST00000415361 CLPSP04118 112 aa7□□□□□ -1.29
CTNND1-206ENST00000415361 CRYGSP22914 178 aa7□□□□□ -1.29
CTNND1-206ENST00000415361 DUTP33316 252 aaKnown RBP7□□□□□ -1.29
CTNND1-206ENST00000415361 ZNF324BQ6AW86 544 aaPredicted RBP7□□□□□ -1.29
CTNND1-206ENST00000415361 HEPN1Q6WQI6 88 aa7□□□□□ -1.29
CTNND1-206ENST00000415361 ARL6IP6Q8N6S5 226 aa7□□□□□ -1.29
CTNND1-206ENST00000415361 LYZL4Q96KX0 146 aa7□□□□□ -1.29
CTNND1-206ENST00000415361 RPUSD1Q9UJJ7 312 aaKnown RBP7□□□□□ -1.29
CTNND1-206ENST00000415361 CYSLTR1Q9Y271 337 aa7□□□□□ -1.29
CTNND1-206ENST00000415361 SRP19P09132 144 aaKnown RBP7□□□□□ -1.29
CTNND1-206ENST00000415361 EFNB1P98172 346 aa7□□□□□ -1.29
CTNND1-206ENST00000415361 OR9G4Q8NGQ1 327 aa7□□□□□ -1.29
CTNND1-206ENST00000415361 OSTCQ9NRP0 149 aa7□□□□□ -1.29
CTNND1-206ENST00000415361 TMEM178BH3BS89 294 aa7□□□□□ -1.29
CTNND1-206ENST00000415361 SAP30O75446 220 aa7□□□□□ -1.29
CTNND1-206ENST00000415361 CBLN1P23435 193 aa7□□□□□ -1.29
CTNND1-206ENST00000415361 MBNL3Q9NUK0 354 aaKnown RBP7□□□□□ -1.29
CTNND1-206ENST00000415361 NUP210Q8TEM1 1887 aaPredicted RBP7□□□□□ -1.29
CTNND1-206ENST00000415361 TRAV8-6A0A0B4J262 113 aa7□□□□□ -1.29
CTNND1-206ENST00000415361 MBD3L4A6NDZ8 208 aaPredicted RBP7□□□□□ -1.29
CTNND1-206ENST00000415361 MBD3L3A6NE82 208 aaPredicted RBP7□□□□□ -1.29
CTNND1-206ENST00000415361 MBD3L5A6NJ08 208 aaPredicted RBP7□□□□□ -1.29
CTNND1-206ENST00000415361 TSPAN13O95857 204 aa7□□□□□ -1.29
CTNND1-206ENST00000415361 ZNF585BQ52M93 769 aa7□□□□□ -1.29
CTNND1-206ENST00000415361 MBD3L2Q8NHZ7 208 aaPredicted RBP7□□□□□ -1.29
CTNND1-206ENST00000415361 KLHDC3Q9BQ90 382 aa7□□□□□ -1.29
CTNND1-206ENST00000415361 PSG8Q9UQ74 426 aa7□□□□□ -1.29
CTNND1-206ENST00000415361 IGHV1-8P0DP01 117 aa7□□□□□ -1.29
CTNND1-206ENST00000415361 SRSF8Q9BRL6 282 aaKnown RBP7□□□□□ -1.29
CTNND1-206ENST00000415361 SLC25A2Q9BXI2 301 aa7□□□□□ -1.29
CTNND1-206ENST00000415361 SLC25A15Q9Y619 301 aa7□□□□□ -1.29
CTNND1-206ENST00000415361 ZNF98A6NK75 572 aa6.99□□□□□ -1.29
CTNND1-206ENST00000415361 ADARB2-AS1A8MUL3 147 aa6.99□□□□□ -1.29
CTNND1-206ENST00000415361 TMEM86BQ8N661 226 aa6.99□□□□□ -1.29
CTNND1-206ENST00000415361 RNF182Q8N6D2 247 aa6.99□□□□□ -1.29
CTNND1-206ENST00000415361 BEX4Q9NWD9 120 aaPredicted RBP6.99□□□□□ -1.29
CTNND1-206ENST00000415361 ATP5L2Q7Z4Y8 100 aa6.99□□□□□ -1.29
CTNND1-206ENST00000415361 CUL9Q8IWT3 2517 aa6.99□□□□□ -1.29
CTNND1-206ENST00000415361 TYMSP04818 313 aa6.99□□□□□ -1.29
CTNND1-206ENST00000415361 CD33P20138 364 aa6.99□□□□□ -1.29
CTNND1-206ENST00000415361 ZNF415Q09FC8 603 aa6.99□□□□□ -1.29
CTNND1-206ENST00000415361 TMEM155Q4W5P6 130 aa6.99□□□□□ -1.29
CTNND1-206ENST00000415361 IMMP2LQ96T52 175 aa6.99□□□□□ -1.29
CTNND1-206ENST00000415361 GRIFINA4D1Z8 144 aa6.99□□□□□ -1.29
CTNND1-206ENST00000415361 LYPD3O95274 346 aa6.99□□□□□ -1.29
CTNND1-206ENST00000415361 C10orf126Q8N4M7 172 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms