RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 ATP5G2Q06055 141 aa7.5□□□□□ -1.21
RIF1-202ENST00000414861 Q56UQ5 140 aa7.5□□□□□ -1.21
RIF1-202ENST00000414861 TCTEX1D4Q5JR98 221 aa7.5□□□□□ -1.21
RIF1-202ENST00000414861 TEX38Q6PEX7 206 aa7.5□□□□□ -1.21
RIF1-202ENST00000414861 CENPVQ7Z7K6 275 aaPredicted RBP7.5□□□□□ -1.21
RIF1-202ENST00000414861 OR2G3Q8NGZ4 309 aa7.5□□□□□ -1.21
RIF1-202ENST00000414861 PCNPQ8WW12 178 aaKnown RBP7.5□□□□□ -1.21
RIF1-202ENST00000414861 VSIRQ9H7M9 311 aa7.5□□□□□ -1.21
RIF1-202ENST00000414861 MPDU1O75352 247 aa7.5□□□□□ -1.21
RIF1-202ENST00000414861 TRBV12-3P01733 135 aa7.5□□□□□ -1.21
RIF1-202ENST00000414861 FOXE3Q13461 319 aa7.5□□□□□ -1.21
RIF1-202ENST00000414861 TIGITQ495A1 244 aa7.5□□□□□ -1.21
RIF1-202ENST00000414861 GCSAMLQ5JQS6 135 aa7.5□□□□□ -1.21
RIF1-202ENST00000414861 STPG3Q8N7X2 389 aa7.5□□□□□ -1.21
RIF1-202ENST00000414861 BPIFCQ8NFQ6 507 aa7.5□□□□□ -1.21
RIF1-202ENST00000414861 MYOZ3Q8TDC0 251 aa7.5□□□□□ -1.21
RIF1-202ENST00000414861 GNPNAT1Q96EK6 184 aaPredicted RBP7.5□□□□□ -1.21
RIF1-202ENST00000414861 PHYHIPLQ96FC7 376 aa7.5□□□□□ -1.21
RIF1-202ENST00000414861 ZNF414Q96IQ9 312 aa7.5□□□□□ -1.21
RIF1-202ENST00000414861 CXorf58Q96LI9 332 aa7.5□□□□□ -1.21
RIF1-202ENST00000414861 PSMG3Q9BT73 122 aaPredicted RBP7.5□□□□□ -1.21
RIF1-202ENST00000414861 CHRDL1Q9BU40 450 aa7.5□□□□□ -1.21
RIF1-202ENST00000414861 SLC45A2Q9UMX9 530 aa7.5□□□□□ -1.21
RIF1-202ENST00000414861 TCRBV4S1A1TA0A5B7 111 aa7.49□□□□□ -1.21
RIF1-202ENST00000414861 GNG7O60262 68 aa7.49□□□□□ -1.21
RIF1-202ENST00000414861 SEC11BP0C7V7 166 aa7.49□□□□□ -1.21
RIF1-202ENST00000414861 ADMP35318 185 aa7.49□□□□□ -1.21
RIF1-202ENST00000414861 FHITP49789 147 aa7.49□□□□□ -1.21
RIF1-202ENST00000414861 CLEC19AQ6UXS0 136 aa7.49□□□□□ -1.21
RIF1-202ENST00000414861 CYP2G1PQ6ZSU1 146 aa7.49□□□□□ -1.21
RIF1-202ENST00000414861 RNF152Q8N8N0 203 aa7.49□□□□□ -1.21
RIF1-202ENST00000414861 OR5AU1Q8NGC0 362 aa7.49□□□□□ -1.21
RIF1-202ENST00000414861 EEF1AKMT3Q96AZ1 226 aa7.49□□□□□ -1.21
RIF1-202ENST00000414861 TRGV9Q99603 122 aa7.49□□□□□ -1.21
RIF1-202ENST00000414861 TIMM9Q9Y5J7 89 aa7.49□□□□□ -1.21
RIF1-202ENST00000414861 PXMP4Q9Y6I8 212 aa7.49□□□□□ -1.21
RIF1-202ENST00000414861 TMEM89A2RUT3 159 aa7.49□□□□□ -1.21
RIF1-202ENST00000414861 PPP5D1E7EU14 171 aa7.49□□□□□ -1.21
RIF1-202ENST00000414861 RGS13O14921 159 aa7.49□□□□□ -1.21
RIF1-202ENST00000414861 YIF1AO95070 293 aa7.49□□□□□ -1.21
RIF1-202ENST00000414861 CLEC3BP05452 202 aa7.49□□□□□ -1.21
RIF1-202ENST00000414861 ELANEP08246 267 aa7.49□□□□□ -1.21
RIF1-202ENST00000414861 CTSGP08311 255 aa7.49□□□□□ -1.21
RIF1-202ENST00000414861 LINC00869P0C866 280 aa7.49□□□□□ -1.21
RIF1-202ENST00000414861 FCGR2BP31994 310 aaPredicted RBP7.49□□□□□ -1.21
RIF1-202ENST00000414861 NPBWR1P48145 328 aa7.49□□□□□ -1.21
RIF1-202ENST00000414861 PRR20EP86478 221 aa7.49□□□□□ -1.21
RIF1-202ENST00000414861 PRR20CP86479 221 aa7.49□□□□□ -1.21
RIF1-202ENST00000414861 PRR20DP86480 221 aa7.49□□□□□ -1.21
RIF1-202ENST00000414861 PRR20BP86481 221 aa7.49□□□□□ -1.21
RIF1-202ENST00000414861 PRR20AP86496 221 aa7.49□□□□□ -1.21
RIF1-202ENST00000414861 ZNF709Q8N972 641 aa7.49□□□□□ -1.21
RIF1-202ENST00000414861 USMG5Q96IX5 58 aa7.49□□□□□ -1.21
RIF1-202ENST00000414861 OR5B12Q96R08 314 aa7.49□□□□□ -1.21
RIF1-202ENST00000414861 GNB4Q9HAV0 340 aa7.49□□□□□ -1.21
RIF1-202ENST00000414861 IGHV3-35A0A0C4DH35 117 aa7.48□□□□□ -1.21
RIF1-202ENST00000414861 IFNA7P01567 189 aa7.48□□□□□ -1.21
RIF1-202ENST00000414861 RAB2AP61019 212 aa7.48□□□□□ -1.21
RIF1-202ENST00000414861 B2MP61769 119 aa7.48□□□□□ -1.21
RIF1-202ENST00000414861 FFAR4Q5NUL3 377 aa7.48□□□□□ -1.21
RIF1-202ENST00000414861 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.48□□□□□ -1.21
RIF1-202ENST00000414861 ZNF491Q8N8L2 437 aa7.48□□□□□ -1.21
RIF1-202ENST00000414861 C11orf44Q8N8P7 122 aa7.48□□□□□ -1.21
RIF1-202ENST00000414861 UBQLN2Q9UHD9 624 aa7.48□□□□□ -1.21
RIF1-202ENST00000414861 WNK1Q9H4A3 2382 aa7.48□□□□□ -1.21
RIF1-202ENST00000414861 TRBV7-1A0A0A6YYK4 115 aa7.48□□□□□ -1.21
RIF1-202ENST00000414861 C17orf112F2Z3M2 114 aa7.48□□□□□ -1.21
RIF1-202ENST00000414861 HAX1O00165 279 aa7.48□□□□□ -1.21
RIF1-202ENST00000414861 EIF3GO75821 320 aaKnown RBP eCLIP7.48□□□□□ -1.21
RIF1-202ENST00000414861 RPL29P47914 159 aaKnown RBP7.48□□□□□ -1.21
RIF1-202ENST00000414861 PROK1P58294 105 aa7.48□□□□□ -1.21
RIF1-202ENST00000414861 RAB31Q13636 194 aa7.48□□□□□ -1.21
RIF1-202ENST00000414861 ZNF343Q6P1L6 599 aa7.48□□□□□ -1.21
RIF1-202ENST00000414861 C18orf65Q6ZTR6 163 aa7.48□□□□□ -1.21
RIF1-202ENST00000414861 OR4F5Q8NH21 305 aa7.48□□□□□ -1.21
RIF1-202ENST00000414861 SLC39A9Q9NUM3 307 aa7.48□□□□□ -1.21
RIF1-202ENST00000414861 RNF114Q9Y508 228 aa7.48□□□□□ -1.21
RIF1-202ENST00000414861 A0A0G2JLM5 398 aa7.47□□□□□ -1.21
RIF1-202ENST00000414861 ANKRD34BA5PLL1 514 aa7.47□□□□□ -1.21
RIF1-202ENST00000414861 PSG1P11464 419 aa7.47□□□□□ -1.21
RIF1-202ENST00000414861 SULT1A2P50226 295 aa7.47□□□□□ -1.21
RIF1-202ENST00000414861 EIF5AL1Q6IS14 154 aaKnown RBP7.47□□□□□ -1.21
RIF1-202ENST00000414861 ZNF767PQ75MW2 155 aa7.47□□□□□ -1.21
RIF1-202ENST00000414861 OR4X2Q8NGF9 303 aa7.47□□□□□ -1.21
RIF1-202ENST00000414861 TXN2Q99757 166 aa7.47□□□□□ -1.21
RIF1-202ENST00000414861 RPRMQ9NS64 109 aa7.47□□□□□ -1.21
RIF1-202ENST00000414861 TENM1Q9UKZ4 2725 aa7.47□□□□□ -1.21
RIF1-202ENST00000414861 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.47□□□□□ -1.21
RIF1-202ENST00000414861 CLPSL1A2RUU4 121 aa7.47□□□□□ -1.21
RIF1-202ENST00000414861 TGOLN2O43493 480 aa7.47□□□□□ -1.21
RIF1-202ENST00000414861 TSPAN15O95858 294 aa7.47□□□□□ -1.21
RIF1-202ENST00000414861 CD28P10747 220 aa7.47□□□□□ -1.21
RIF1-202ENST00000414861 SERF2P84101 59 aa7.47□□□□□ -1.21
RIF1-202ENST00000414861 ZNF616Q08AN1 781 aa7.47□□□□□ -1.21
RIF1-202ENST00000414861 DOK5Q9P104 306 aa7.47□□□□□ -1.21
RIF1-202ENST00000414861 IGHV3OR16-8A0A075B7F1 116 aa7.46□□□□□ -1.21
RIF1-202ENST00000414861 NUPL2O15504 423 aaKnown RBP7.46□□□□□ -1.21
RIF1-202ENST00000414861 ZNF726P1Q15940 193 aa7.46□□□□□ -1.21
RIF1-202ENST00000414861 KHDC1LQ5JSQ8 128 aa7.46□□□□□ -1.21
RIF1-202ENST00000414861 AKR1C8PQ5T2L2 129 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms