RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 PRR13Q9NZ81 148 aa16.37■□□□□ 0.21
MSH6-202ENST00000411819 ANKRD20A5PA0PJZ0 165 aa16.36■□□□□ 0.21
MSH6-202ENST00000411819 TMBIM6P55061 237 aa16.36■□□□□ 0.21
MSH6-202ENST00000411819 C2orf83Q53S99 150 aa16.36■□□□□ 0.21
MSH6-202ENST00000411819 PRSS54Q6PEW0 395 aa16.36■□□□□ 0.21
MSH6-202ENST00000411819 OR1S2Q8NGQ3 325 aa16.36■□□□□ 0.21
MSH6-202ENST00000411819 PHLDA1Q8WV24 401 aaPredicted RBP16.36■□□□□ 0.21
MSH6-202ENST00000411819 GRAMD2BQ96HH9 432 aa16.36■□□□□ 0.21
MSH6-202ENST00000411819 SCP2D1Q9UJQ7 156 aa16.36■□□□□ 0.21
MSH6-202ENST00000411819 KCNIP3Q9Y2W7 256 aa16.36■□□□□ 0.21
MSH6-202ENST00000411819 IGLC1P0CG04 106 aa16.35■□□□□ 0.21
MSH6-202ENST00000411819 SULT1A3P0DMM9 295 aa16.35■□□□□ 0.21
MSH6-202ENST00000411819 SULT1A4P0DMN0 295 aa16.35■□□□□ 0.21
MSH6-202ENST00000411819 SLC25A4P12235 298 aa16.35■□□□□ 0.21
MSH6-202ENST00000411819 NPY1RP25929 384 aa16.35■□□□□ 0.21
MSH6-202ENST00000411819 OR10J1P30954 320 aa16.35■□□□□ 0.21
MSH6-202ENST00000411819 TMEM187Q14656 261 aa16.35■□□□□ 0.21
MSH6-202ENST00000411819 RNASEH2CQ8TDP1 164 aaKnown RBP16.35■□□□□ 0.21
MSH6-202ENST00000411819 BCL7BQ9BQE9 202 aa16.35■□□□□ 0.21
MSH6-202ENST00000411819 RSL24D1Q9UHA3 163 aaKnown RBP16.35■□□□□ 0.21
MSH6-202ENST00000411819 TMEM56-RWDD3S4R434 201 aa16.35■□□□□ 0.21
MSH6-202ENST00000411819 K7EQG2 157 aa16.34■□□□□ 0.21
MSH6-202ENST00000411819 GSTZ1O43708 216 aaPredicted RBP16.34■□□□□ 0.21
MSH6-202ENST00000411819 ZNF688P0C7X2 276 aa16.34■□□□□ 0.21
MSH6-202ENST00000411819 RBMS2Q15434 407 aaKnown RBP16.34■□□□□ 0.21
MSH6-202ENST00000411819 Q8WTZ3 238 aa16.34■□□□□ 0.21
MSH6-202ENST00000411819 IL22RA2Q969J5 263 aa16.34■□□□□ 0.21
MSH6-202ENST00000411819 SCGB3A2Q96PL1 93 aa16.34■□□□□ 0.21
MSH6-202ENST00000411819 C11orf68Q9H3H3 251 aaKnown RBP16.34■□□□□ 0.21
MSH6-202ENST00000411819 AKR1C4P17516 323 aa16.33■□□□□ 0.2
MSH6-202ENST00000411819 EIF2B2P49770 351 aaKnown RBP16.33■□□□□ 0.2
MSH6-202ENST00000411819 ETFRF1Q6IPR1 90 aa16.33■□□□□ 0.2
MSH6-202ENST00000411819 C11orf45Q8TAV5 145 aa16.33■□□□□ 0.2
MSH6-202ENST00000411819 ACY3Q96HD9 319 aa16.33■□□□□ 0.2
MSH6-202ENST00000411819 FBXL17Q9UF56 701 aa16.33■□□□□ 0.2
MSH6-202ENST00000411819 AGRNO00468 2067 aa16.33■□□□□ 0.2
MSH6-202ENST00000411819 DEFB4AO15263 64 aa16.32■□□□□ 0.2
MSH6-202ENST00000411819 IFNA10P01566 189 aa16.32■□□□□ 0.2
MSH6-202ENST00000411819 HNRNPCP07910 306 aaKnown RBP eCLIP16.32■□□□□ 0.2
MSH6-202ENST00000411819 NANOS2P60321 138 aaKnown RBP16.32■□□□□ 0.2
MSH6-202ENST00000411819 NOXA1Q86UR1 476 aa16.32■□□□□ 0.2
MSH6-202ENST00000411819 TMEM170AQ8WVE7 144 aa16.32■□□□□ 0.2
MSH6-202ENST00000411819 MFFQ9GZY8 342 aa16.32■□□□□ 0.2
MSH6-202ENST00000411819 CACFD1Q9UGQ2 172 aa16.32■□□□□ 0.2
MSH6-202ENST00000411819 HELTA6NFD8 242 aa16.31■□□□□ 0.2
MSH6-202ENST00000411819 FABP12A6NFH5 140 aa16.31■□□□□ 0.2
MSH6-202ENST00000411819 H3BMQ9 156 aa16.31■□□□□ 0.2
MSH6-202ENST00000411819 IL4P05112 153 aa16.31■□□□□ 0.2
MSH6-202ENST00000411819 YPEL3P61236 119 aaPredicted RBP16.31■□□□□ 0.2
MSH6-202ENST00000411819 DHRS2Q13268 280 aa16.31■□□□□ 0.2
MSH6-202ENST00000411819 NPIPB3Q92617 1050 aa16.31■□□□□ 0.2
MSH6-202ENST00000411819 SLIRPQ9GZT3 109 aaKnown RBP16.31■□□□□ 0.2
MSH6-202ENST00000411819 KNCNA6PVL3 124 aa16.3■□□□□ 0.2
MSH6-202ENST00000411819 ANXA3P12429 323 aa16.3■□□□□ 0.2
MSH6-202ENST00000411819 TNFSF8P32971 234 aa16.3■□□□□ 0.2
MSH6-202ENST00000411819 CCR6P51684 374 aa16.3■□□□□ 0.2
MSH6-202ENST00000411819 USF2Q15853 346 aaPredicted RBP16.3■□□□□ 0.2
MSH6-202ENST00000411819 NMSQ5H8A3 153 aa16.3■□□□□ 0.2
MSH6-202ENST00000411819 TRPT1Q86TN4 253 aaKnown RBP16.3■□□□□ 0.2
MSH6-202ENST00000411819 MCFD2Q8NI22 146 aa16.3■□□□□ 0.2
MSH6-202ENST00000411819 DTD1Q8TEA8 209 aa16.3■□□□□ 0.2
MSH6-202ENST00000411819 DCANP1Q8TF63 244 aa16.3■□□□□ 0.2
MSH6-202ENST00000411819 A0A0B4J2A0 478 aa16.29■□□□□ 0.2
MSH6-202ENST00000411819 SMCO1Q147U7 214 aa16.29■□□□□ 0.2
MSH6-202ENST00000411819 ACTL10Q5JWF8 245 aa16.29■□□□□ 0.2
MSH6-202ENST00000411819 LYZL2Q7Z4W2 148 aa16.29■□□□□ 0.2
MSH6-202ENST00000411819 GLMPQ8WWB7 406 aa16.29■□□□□ 0.2
MSH6-202ENST00000411819 SHPKQ9UHJ6 478 aa16.29■□□□□ 0.2
MSH6-202ENST00000411819 IFNA4P05014 189 aa16.28■□□□□ 0.2
MSH6-202ENST00000411819 SPP1P10451 314 aa16.28■□□□□ 0.2
MSH6-202ENST00000411819 SUPT4H1P63272 117 aaKnown RBP16.28■□□□□ 0.2
MSH6-202ENST00000411819 SRPXP78539 464 aa16.28■□□□□ 0.2
MSH6-202ENST00000411819 PSMG4Q5JS54 123 aa16.28■□□□□ 0.2
MSH6-202ENST00000411819 C16orf54Q6UWD8 224 aa16.28■□□□□ 0.2
MSH6-202ENST00000411819 LGI3Q8N145 548 aa16.28■□□□□ 0.2
MSH6-202ENST00000411819 RBKSQ9H477 322 aa16.28■□□□□ 0.2
MSH6-202ENST00000411819 HSPB7Q9UBY9 170 aa16.28■□□□□ 0.2
MSH6-202ENST00000411819 U3KQE9 123 aa16.28■□□□□ 0.2
MSH6-202ENST00000411819 TOMM40O96008 361 aa16.27■□□□□ 0.2
MSH6-202ENST00000411819 RD3LP0DJH9 198 aa16.27■□□□□ 0.2
MSH6-202ENST00000411819 C4BPBP20851 252 aa16.27■□□□□ 0.2
MSH6-202ENST00000411819 FAUP35544 74 aaKnown RBP16.27■□□□□ 0.2
MSH6-202ENST00000411819 AP2S1P53680 142 aaPredicted RBP16.27■□□□□ 0.2
MSH6-202ENST00000411819 TMEM41BQ5BJD5 291 aa16.27■□□□□ 0.2
MSH6-202ENST00000411819 MORN3Q6PF18 240 aaPredicted RBP16.27■□□□□ 0.2
MSH6-202ENST00000411819 OR1S1Q8NH92 325 aa16.27■□□□□ 0.2
MSH6-202ENST00000411819 U3KQ87 197 aa16.27■□□□□ 0.2
MSH6-202ENST00000411819 TMED4Q7Z7H5 227 aa16.26■□□□□ 0.19
MSH6-202ENST00000411819 SOSTQ9BQB4 213 aa16.26■□□□□ 0.19
MSH6-202ENST00000411819 PSG1P11464 419 aa16.25■□□□□ 0.19
MSH6-202ENST00000411819 PYDC2Q56P42 97 aa16.25■□□□□ 0.19
MSH6-202ENST00000411819 SIGLEC15Q6ZMC9 328 aa16.25■□□□□ 0.19
MSH6-202ENST00000411819 Q8NAQ8 132 aa16.25■□□□□ 0.19
MSH6-202ENST00000411819 PBDC1Q9BVG4 233 aa16.25■□□□□ 0.19
MSH6-202ENST00000411819 IGHV4-28A0A0C4DH34 117 aa16.24■□□□□ 0.19
MSH6-202ENST00000411819 GIG44P09565 113 aaPredicted RBP16.24■□□□□ 0.19
MSH6-202ENST00000411819 AP3S2P59780 193 aa16.24■□□□□ 0.19
MSH6-202ENST00000411819 SNRPD3P62318 126 aaKnown RBP16.24■□□□□ 0.19
MSH6-202ENST00000411819 TOMM5Q8N4H5 51 aa16.24■□□□□ 0.19
MSH6-202ENST00000411819 OR51G1Q8NGK1 321 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms