RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 IGHV1OR15-1A0A075B7D0 117 aa3.81□□□□□ -1.8
PTPN13-202ENST00000411767 TRBV10-2A0A0K0K1G8 114 aa3.81□□□□□ -1.8
PTPN13-202ENST00000411767 IGHV3-7P01780 117 aa3.81□□□□□ -1.8
PTPN13-202ENST00000411767 UBE2D1P51668 147 aa3.81□□□□□ -1.8
PTPN13-202ENST00000411767 DPTQ07507 201 aa3.81□□□□□ -1.8
PTPN13-202ENST00000411767 FAM53BQ14153 422 aa3.81□□□□□ -1.8
PTPN13-202ENST00000411767 DEFB112Q30KQ8 113 aa3.81□□□□□ -1.8
PTPN13-202ENST00000411767 MRPL14Q6P1L8 145 aaKnown RBP3.81□□□□□ -1.8
PTPN13-202ENST00000411767 LYZL2Q7Z4W2 148 aa3.81□□□□□ -1.8
PTPN13-202ENST00000411767 HIST3H2BBQ8N257 126 aa3.81□□□□□ -1.8
PTPN13-202ENST00000411767 LINC00477Q96M19 166 aa3.81□□□□□ -1.8
PTPN13-202ENST00000411767 RIMS1Q86UR5 1692 aaKnown RBP3.81□□□□□ -1.8
PTPN13-202ENST00000411767 NRKQ7Z2Y5 1582 aa3.81□□□□□ -1.8
PTPN13-202ENST00000411767 TRAV1-1A0A0B4J248 108 aa3.81□□□□□ -1.8
PTPN13-202ENST00000411767 CRYGSP22914 178 aa3.81□□□□□ -1.8
PTPN13-202ENST00000411767 MRPS36P82909 103 aaKnown RBP3.81□□□□□ -1.8
PTPN13-202ENST00000411767 C8orf82Q6P1X6 216 aaPredicted RBP3.81□□□□□ -1.8
PTPN13-202ENST00000411767 FAM19A2Q8N3H0 131 aa3.81□□□□□ -1.8
PTPN13-202ENST00000411767 INSM2Q96T92 566 aaPredicted RBP3.81□□□□□ -1.8
PTPN13-202ENST00000411767 ITSN1Q15811 1721 aa3.81□□□□□ -1.8
PTPN13-202ENST00000411767 TM4SF5O14894 197 aa3.81□□□□□ -1.8
PTPN13-202ENST00000411767 SAP30O75446 220 aa3.81□□□□□ -1.8
PTPN13-202ENST00000411767 IGHV3-13P01766 116 aa3.81□□□□□ -1.8
PTPN13-202ENST00000411767 ZGLP1P0C6A0 271 aa3.81□□□□□ -1.8
PTPN13-202ENST00000411767 DANCRP0C864 163 aa3.81□□□□□ -1.8
PTPN13-202ENST00000411767 CDAP32320 146 aa3.81□□□□□ -1.8
PTPN13-202ENST00000411767 C1QTNF12Q5T7M4 302 aa3.81□□□□□ -1.8
PTPN13-202ENST00000411767 SLC25A47Q6Q0C1 308 aa3.81□□□□□ -1.8
PTPN13-202ENST00000411767 ZC3H3Q8IXZ2 948 aaKnown RBP3.81□□□□□ -1.8
PTPN13-202ENST00000411767 TOPAZ1Q8N9V7 1692 aa3.81□□□□□ -1.8
PTPN13-202ENST00000411767 TRBV19A0A075B6N1 114 aa3.81□□□□□ -1.8
PTPN13-202ENST00000411767 WNT10BO00744 389 aa3.81□□□□□ -1.8
PTPN13-202ENST00000411767 IGFBP3P17936 291 aaPredicted RBP3.81□□□□□ -1.8
PTPN13-202ENST00000411767 RHOHQ15669 191 aa3.81□□□□□ -1.8
PTPN13-202ENST00000411767 C14orf177Q52M58 125 aa3.81□□□□□ -1.8
PTPN13-202ENST00000411767 IGHV2-26A0A0B4J1V2 119 aa3.81□□□□□ -1.8
PTPN13-202ENST00000411767 ZNF250P15622 560 aa3.81□□□□□ -1.8
PTPN13-202ENST00000411767 PFN2P35080 140 aa3.81□□□□□ -1.8
PTPN13-202ENST00000411767 PRR20EP86478 221 aa3.81□□□□□ -1.8
PTPN13-202ENST00000411767 PRR20CP86479 221 aa3.81□□□□□ -1.8
PTPN13-202ENST00000411767 PRR20DP86480 221 aa3.81□□□□□ -1.8
PTPN13-202ENST00000411767 PRR20BP86481 221 aa3.81□□□□□ -1.8
PTPN13-202ENST00000411767 PRR20AP86496 221 aa3.81□□□□□ -1.8
PTPN13-202ENST00000411767 DIAPH2-AS1Q14236 149 aa3.81□□□□□ -1.8
PTPN13-202ENST00000411767 VGLL2Q8N8G2 317 aa3.81□□□□□ -1.8
PTPN13-202ENST00000411767 NEU4Q8WWR8 484 aaPredicted RBP3.81□□□□□ -1.8
PTPN13-202ENST00000411767 CCDC88CQ9P219 2028 aa3.81□□□□□ -1.8
PTPN13-202ENST00000411767 H0YIZ8 118 aa3.81□□□□□ -1.8
PTPN13-202ENST00000411767 I3L3M4 83 aa3.81□□□□□ -1.8
PTPN13-202ENST00000411767 TRIAP1O43715 76 aa3.81□□□□□ -1.8
PTPN13-202ENST00000411767 AMTNQ6UX39 209 aa3.81□□□□□ -1.8
PTPN13-202ENST00000411767 C20orf197Q8N268 126 aa3.81□□□□□ -1.8
PTPN13-202ENST00000411767 DAND5Q8N907 189 aa3.81□□□□□ -1.8
PTPN13-202ENST00000411767 CSTL1Q9H114 145 aa3.81□□□□□ -1.8
PTPN13-202ENST00000411767 COLQQ9Y215 455 aaPredicted RBP3.81□□□□□ -1.8
PTPN13-202ENST00000411767 G3V2L1 256 aa3.8□□□□□ -1.8
PTPN13-202ENST00000411767 TMEM256-PLSCR3K7ERE1 68 aa3.8□□□□□ -1.8
PTPN13-202ENST00000411767 LYL1P12980 280 aa3.8□□□□□ -1.8
PTPN13-202ENST00000411767 RPL18AQ02543 176 aaKnown RBP3.8□□□□□ -1.8
PTPN13-202ENST00000411767 LCNL1Q6ZST4 164 aa3.8□□□□□ -1.8
PTPN13-202ENST00000411767 MAVSQ7Z434 540 aa3.8□□□□□ -1.8
PTPN13-202ENST00000411767 ARHGAP23Q9P227 1491 aa3.8□□□□□ -1.8
PTPN13-202ENST00000411767 C3P01024 1663 aa3.8□□□□□ -1.8
PTPN13-202ENST00000411767 CCL20P78556 96 aa3.8□□□□□ -1.8
PTPN13-202ENST00000411767 MUC21Q5SSG8 566 aa3.8□□□□□ -1.8
PTPN13-202ENST00000411767 SPINT4Q6UDR6 99 aa3.8□□□□□ -1.8
PTPN13-202ENST00000411767 C9orf62Q8N4C0 152 aa3.8□□□□□ -1.8
PTPN13-202ENST00000411767 NALCNQ8IZF0 1738 aa3.8□□□□□ -1.8
PTPN13-202ENST00000411767 K7ENP7 123 aa3.8□□□□□ -1.8
PTPN13-202ENST00000411767 C1QL3Q5VWW1 255 aa3.8□□□□□ -1.8
PTPN13-202ENST00000411767 RNF225M0QZC1 329 aaPredicted RBP3.8□□□□□ -1.8
PTPN13-202ENST00000411767 UQCRQO14949 82 aa3.8□□□□□ -1.8
PTPN13-202ENST00000411767 NBR2O15453 112 aa3.8□□□□□ -1.8
PTPN13-202ENST00000411767 PEAR1Q5VY43 1037 aaPredicted RBP3.8□□□□□ -1.8
PTPN13-202ENST00000411767 SPSB3Q6PJ21 355 aa3.8□□□□□ -1.8
PTPN13-202ENST00000411767 CFHR4Q92496 578 aa3.8□□□□□ -1.8
PTPN13-202ENST00000411767 HS3ST6Q96QI5 342 aa3.8□□□□□ -1.8
PTPN13-202ENST00000411767 USP54Q70EL1 1684 aa3.8□□□□□ -1.8
PTPN13-202ENST00000411767 hDV102S1A0JD36 115 aa3.8□□□□□ -1.8
PTPN13-202ENST00000411767 PRSS47A8MTI9 375 aa3.8□□□□□ -1.8
PTPN13-202ENST00000411767 CRYGDP07320 174 aa3.8□□□□□ -1.8
PTPN13-202ENST00000411767 MPZP25189 248 aa3.8□□□□□ -1.8
PTPN13-202ENST00000411767 DSCR9P59020 149 aa3.8□□□□□ -1.8
PTPN13-202ENST00000411767 C3orf36Q3SXR2 165 aa3.8□□□□□ -1.8
PTPN13-202ENST00000411767 CLEC19AQ6UXS0 136 aa3.8□□□□□ -1.8
PTPN13-202ENST00000411767 PILRBQ9UKJ0 227 aa3.8□□□□□ -1.8
PTPN13-202ENST00000411767 A0A1W2PRX2 142 aa3.8□□□□□ -1.8
PTPN13-202ENST00000411767 IGHV4-59P01825 116 aa3.8□□□□□ -1.8
PTPN13-202ENST00000411767 IGF1P05019 195 aa3.8□□□□□ -1.8
PTPN13-202ENST00000411767 SNHG28P0DPA3 235 aa3.8□□□□□ -1.8
PTPN13-202ENST00000411767 RUNX1Q01196 453 aa3.8□□□□□ -1.8
PTPN13-202ENST00000411767 MRPL23Q16540 153 aaKnown RBP3.8□□□□□ -1.8
PTPN13-202ENST00000411767 LY6G6FQ5SQ64 297 aa3.8□□□□□ -1.8
PTPN13-202ENST00000411767 TMEFF1Q8IYR6 380 aa3.8□□□□□ -1.8
PTPN13-202ENST00000411767 FANCD2OSQ96PS1 177 aa3.8□□□□□ -1.8
PTPN13-202ENST00000411767 MRPL27Q9P0M9 148 aaKnown RBP3.8□□□□□ -1.8
PTPN13-202ENST00000411767 TCF19Q9Y242 345 aa3.8□□□□□ -1.8
PTPN13-202ENST00000411767 DLG5Q8TDM6 1919 aa3.79□□□□□ -1.8
PTPN13-202ENST00000411767 TRAV4A0A0B4J268 109 aa3.79□□□□□ -1.8
PTPN13-202ENST00000411767 BPY2O14599 106 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms